Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13a06
         (626 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   1.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   1.8  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   1.8  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   3.2  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   5.6  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   7.4  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    21   9.8  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    21   9.8  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    21   9.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 204 SLLKTVLNYFKIYKKN 157
           S+ KT+L+Y+  YK+N
Sbjct: 419 SIYKTILDYYHKYKEN 434


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 204 SLLKTVLNYFKIYKKN 157
           S+ KT+L+Y+  YK+N
Sbjct: 419 SIYKTILDYYHKYKEN 434


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 204 SLLKTVLNYFKIYKKN 157
           S+ KT+L+Y+  YK+N
Sbjct: 45  SIYKTILDYYHKYKEN 60


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 400 RFFMKALALTANTLYWSNYI 459
           RFF     L  N +YWS ++
Sbjct: 364 RFFFPFSFLILNVVYWSTFL 383


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 374 NSYTENGQNHVNIYKKLH 321
           N+Y     N+ N YKKL+
Sbjct: 336 NNYNNYNNNNYNNYKKLY 353


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 374 NSYTENGQNHVNIYKKLH 321
           N+Y     N+ N YKKL+
Sbjct: 335 NNYNNYNNNYNNNYKKLY 352


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 439 LYWSNYIRLYINLKTI 486
           LY +NY +LY N+  I
Sbjct: 99  LYCNNYKKLYYNINYI 114


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 439 LYWSNYIRLYINLKTI 486
           LY +NY +LY N+  I
Sbjct: 99  LYCNNYKKLYYNINYI 114


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 439 LYWSNYIRLYINLKTI 486
           LY +NY +LY N+  I
Sbjct: 99  LYCNNYRKLYYNINYI 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,519
Number of Sequences: 438
Number of extensions: 4094
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)