Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13a05
         (638 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL022327-3|CAI42686.1|  747|Homo sapiens protein ( Human DNA seq...    40   0.006
AK023960-1|BAB14741.1|  744|Homo sapiens protein ( Homo sapiens ...    40   0.007
AK027863-1|BAB55415.1|  612|Homo sapiens protein ( Homo sapiens ...    30   6.0  
L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain p...    30   8.0  
D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhance...    30   8.0  
AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.              30   8.0  

>AL022327-3|CAI42686.1|  747|Homo sapiens protein ( Human DNA
           sequence from clone RP3-355C18 on chromosome 22q13.3
           Contains a novel gene, a novel gene, the MLC1 gene for
           megalencephalic leukoencnovel protein (FLJ41993)).
          Length = 747

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 16/42 (38%), Positives = 29/42 (69%)
 Frame = +1

Query: 385 ERWNELKKIAETAMKQRKVFMIKGGGFPAIRRAMLERGWVEK 510
           +R+   +++ E A+K++K+F I G  +P +R A+  +GWVEK
Sbjct: 14  DRYKIARQLTEKAIKEKKIFSIYGH-YPVVRAALRRKGWVEK 54


>AK023960-1|BAB14741.1|  744|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13898 fis, clone THYRO1001738, weakly similar to
           TUBULIN--TYROSINE LIGASE (EC 6.3.2.25). ).
          Length = 744

 Score = 39.9 bits (89), Expect = 0.007
 Identities = 20/46 (43%), Positives = 27/46 (58%)
 Frame = +1

Query: 388 RWNELKKIAETAMKQRKVFMIKGGGFPAIRRAMLERGWVEKYESHK 525
           R    K   E A+KQ+K+F I+G  +P IR  +  RGWVEK   H+
Sbjct: 3   RLRNAKIYVERAVKQKKIFTIQGC-YPVIRCLLRRRGWVEKKMVHR 47


>AK027863-1|BAB55415.1|  612|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14957 fis, clone PLACE4000009, weakly similar to
           MYOSIN HEAVY CHAIN, NONMUSCLE TYPE B. ).
          Length = 612

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
 Frame = +1

Query: 172 QKFQKREGRTRSMA-----VMMELEESVSDSK-LHKE-STAKKDLRPSSAISFSKSDHGP 330
           +  +K EG  R +      V  E +E+VS  + L  E   A+ +L  ++      S+   
Sbjct: 174 ETLKKYEGEIRQLEEALVHVRKEEKEAVSARRALENELEAAQGNLSQTTQEQKQLSEKLK 233

Query: 331 ETTSSTEQLRQYKSWVSNERWNELKKIAETAMKQ 432
           E +   EQLR+ K+ + NERW+ L K  E   K+
Sbjct: 234 EESEQKEQLRRLKNEMENERWH-LGKTIEKLQKE 266


>L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain
            protein protein.
          Length = 3703

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 527  FCRSVFTTKEGLTASLTQMHWH 592
            FCR++F  K  L A +   HWH
Sbjct: 2715 FCRALFKAKTALEAHIRSRHWH 2736


>D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhancer
            binding protein protein.
          Length = 2783

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 527  FCRSVFTTKEGLTASLTQMHWH 592
            FCR++F  K  L A +   HWH
Sbjct: 1801 FCRALFKAKTALEAHIRSRHWH 1822


>AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.
          Length = 2553

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 527  FCRSVFTTKEGLTASLTQMHWH 592
            FCR++F  K  L A +   HWH
Sbjct: 1565 FCRALFKAKTALEAHIRSRHWH 1586


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,121,112
Number of Sequences: 237096
Number of extensions: 1909109
Number of successful extensions: 3432
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3431
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)