Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13a03
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical pr... 232 2e-61
AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical... 228 2e-60
AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical... 228 2e-60
Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical pr... 225 2e-59
Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical pr... 225 3e-59
AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine syn... 182 3e-46
Z83241-2|CAB05816.2| 435|Caenorhabditis elegans Hypothetical pr... 35 0.047
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 31 1.0
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 31 1.0
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 31 1.0
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 31 1.0
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 31 1.0
L23649-1|AAA27912.1| 568|Caenorhabditis elegans Hypothetical pr... 29 3.1
U80447-8|AAB37812.3| 900|Caenorhabditis elegans Patched related... 29 4.1
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 29 4.1
Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF036702-8|AAR85905.1| 377|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical
protein C28D4.3 protein.
Length = 368
Score = 232 bits (567), Expect = 2e-61
Identities = 113/233 (48%), Positives = 147/233 (63%), Gaps = 4/233 (1%)
Frame = +1
Query: 1 TNHRVSSAITLSKICDQEPWFGIEQEYTMFDRDHWPLGWPKPRGYPDQDSKNSYCGVG-E 177
TNHR A + K+ DQ+PWFG+EQEY + DRD PLGWPK GYP K YCG+G +
Sbjct: 115 TNHRQMCAELMKKVSDQQPWFGMEQEYLIVDRDEHPLGWPK-HGYPAPQGKY-YCGIGAD 172
Query: 178 HVAGREIAECHARACIYSGMDYDGSNAEVMNGSWEFQVGPTLGIKAADDIWIGRYLLNRI 357
GRE+ E H RAC+++G+ GSNAEV G WEFQ+G LGI+ D +W+ RY+L+R+
Sbjct: 173 RAFGREVVETHYRACLHAGITIFGSNAEVTPGQWEFQIGTCLGIEMGDQLWMARYILHRV 232
Query: 358 AEHFDVIISFHPKP---MGDGHAGIGCHHNFSTKKMRADQGVTEIKRICKILCDQHEKII 528
AE F V +S PKP MGD + G GCH NFST MR G+ I + L H + +
Sbjct: 233 AEQFGVCVSLDPKPRVTMGDWN-GAGCHTNFSTIDMRRPDGLETIIAAMEGLKKTHSEAM 291
Query: 529 KSYDLKDGEDNKKRLVGKFETSSYDSCRVGISDRSASIRIQKKVISEGKGYFE 687
K YD G DN +RL G+ ETS D GI++R+ S+RI ++V EG+GY E
Sbjct: 292 KVYDPNGGHDNLRRLTGRHETSQADQFSWGIANRACSVRIPRQVADEGRGYLE 344
>AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical
protein Y105C5B.28b protein.
Length = 385
Score = 228 bits (558), Expect = 2e-60
Identities = 112/230 (48%), Positives = 140/230 (60%), Gaps = 1/230 (0%)
Frame = +1
Query: 1 TNHRVSSAITLSKICDQEPWFGIEQEYTMFDRDHWPLGWPKPRGYPDQDSKNSYCGVGEH 180
TN+R + K DQ PWFG+EQEYT+ D D P GWPK G+P YCGVG +
Sbjct: 113 TNYRQRCKEVMEKAADQHPWFGMEQEYTLLDIDGHPFGWPK-NGFPGPQGPY-YCGVGAN 170
Query: 181 -VAGREIAECHARACIYSGMDYDGSNAEVMNGSWEFQVGPTLGIKAADDIWIGRYLLNRI 357
V GR+I E H RAC+Y+G+ G+NAEVM G WEFQVGP GI+ D +W+ RYLL R+
Sbjct: 171 KVYGRDIVEAHYRACLYAGIQISGTNAEVMPGQWEFQVGPCEGIQMGDQLWVARYLLQRV 230
Query: 358 AEHFDVIISFHPKPMGDGHAGIGCHHNFSTKKMRADQGVTEIKRICKILCDQHEKIIKSY 537
AE F VI SF KP+ G GCH NFST KMR G+ EI L H + I Y
Sbjct: 231 AEEFGVIASFDCKPIKGDWNGAGCHTNFSTDKMRNPGGIDEIMSAINKLSLVHPQHIAYY 290
Query: 538 DLKDGEDNKKRLVGKFETSSYDSCRVGISDRSASIRIQKKVISEGKGYFE 687
D G+DN++RL G ET+S D G++ R++SIRI + +G GYFE
Sbjct: 291 DPHGGKDNERRLTGLHETASIDKFSYGVASRASSIRIPRSTDDDGYGYFE 340
>AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical
protein Y105C5B.28a protein.
Length = 388
Score = 228 bits (558), Expect = 2e-60
Identities = 112/230 (48%), Positives = 140/230 (60%), Gaps = 1/230 (0%)
Frame = +1
Query: 1 TNHRVSSAITLSKICDQEPWFGIEQEYTMFDRDHWPLGWPKPRGYPDQDSKNSYCGVGEH 180
TN+R + K DQ PWFG+EQEYT+ D D P GWPK G+P YCGVG +
Sbjct: 116 TNYRQRCKEVMEKAADQHPWFGMEQEYTLLDIDGHPFGWPK-NGFPGPQGPY-YCGVGAN 173
Query: 181 -VAGREIAECHARACIYSGMDYDGSNAEVMNGSWEFQVGPTLGIKAADDIWIGRYLLNRI 357
V GR+I E H RAC+Y+G+ G+NAEVM G WEFQVGP GI+ D +W+ RYLL R+
Sbjct: 174 KVYGRDIVEAHYRACLYAGIQISGTNAEVMPGQWEFQVGPCEGIQMGDQLWVARYLLQRV 233
Query: 358 AEHFDVIISFHPKPMGDGHAGIGCHHNFSTKKMRADQGVTEIKRICKILCDQHEKIIKSY 537
AE F VI SF KP+ G GCH NFST KMR G+ EI L H + I Y
Sbjct: 234 AEEFGVIASFDCKPIKGDWNGAGCHTNFSTDKMRNPGGIDEIMSAINKLSLVHPQHIAYY 293
Query: 538 DLKDGEDNKKRLVGKFETSSYDSCRVGISDRSASIRIQKKVISEGKGYFE 687
D G+DN++RL G ET+S D G++ R++SIRI + +G GYFE
Sbjct: 294 DPHGGKDNERRLTGLHETASIDKFSYGVASRASSIRIPRSTDDDGYGYFE 343
>Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical
protein K03H1.1 protein.
Length = 367
Score = 225 bits (551), Expect = 2e-59
Identities = 112/233 (48%), Positives = 148/233 (63%), Gaps = 4/233 (1%)
Frame = +1
Query: 1 TNHRVSSAITLSKICDQEPWFGIEQEYTMFDRDHWPLGWPKPRGYPDQDSKNSYCGVG-E 177
T+HR + A + +I D PWFG+EQEY + DRD PLGWPK G+PD K YC VG +
Sbjct: 115 TSHRQACAEIMHEIRDTRPWFGMEQEYLIVDRDEHPLGWPK-HGFPDPQGKY-YCSVGAD 172
Query: 178 HVAGREIAECHARACIYSGMDYDGSNAEVMNGSWEFQVGPTLGIKAADDIWIGRYLLNRI 357
GRE+ E H RAC+++G++ G+NAEV G WEFQ+G GI D +W+ RY+L+R+
Sbjct: 173 RAFGREVVETHYRACLHAGLNIFGTNAEVTPGQWEFQIGTCEGIDMGDQLWMSRYILHRV 232
Query: 358 AEHFDVIISFHPKP---MGDGHAGIGCHHNFSTKKMRADQGVTEIKRICKILCDQHEKII 528
AE F V +S PKP MGD + G GCH NFST +MRA G+ I+ L H + +
Sbjct: 233 AEQFGVCVSLDPKPKVTMGDWN-GAGCHTNFSTAEMRAPGGIAAIEAAMTGLKRTHLEAM 291
Query: 529 KSYDLKDGEDNKKRLVGKFETSSYDSCRVGISDRSASIRIQKKVISEGKGYFE 687
K YD GEDN +RL G+ ETSS D G+++R SIRI ++V +E KGY E
Sbjct: 292 KVYDPHGGEDNLRRLTGRHETSSADKFSWGVANRGCSIRIPRQVAAERKGYLE 344
>Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical
protein F26D10.10 protein.
Length = 369
Score = 225 bits (549), Expect = 3e-59
Identities = 111/233 (47%), Positives = 144/233 (61%), Gaps = 4/233 (1%)
Frame = +1
Query: 1 TNHRVSSAITLSKICDQEPWFGIEQEYTMFDRDHWPLGWPKPRGYPDQDSKNSYCGVG-E 177
TNHR + A + K+ + PWFG+EQEY + DRD PLGWPK GYP K YCGVG +
Sbjct: 115 TNHRQNCAAIMKKVAEHHPWFGMEQEYLIVDRDEHPLGWPK-HGYPAPQGKY-YCGVGAD 172
Query: 178 HVAGREIAECHARACIYSGMDYDGSNAEVMNGSWEFQVGPTLGIKAADDIWIGRYLLNRI 357
GRE+ E H RAC+++G++ G+NAEV G WEFQ+G GI D +W+ RY+L+R+
Sbjct: 173 RAFGREVVETHYRACLHAGINIFGTNAEVTPGQWEFQIGTCEGIDMGDQLWMARYILHRV 232
Query: 358 AEHFDVIISFHPKP---MGDGHAGIGCHHNFSTKKMRADQGVTEIKRICKILCDQHEKII 528
AE F V +S PKP MGD + G GCH NFST +MR G+ I K L H + +
Sbjct: 233 AEQFGVCVSLDPKPKVTMGDWN-GAGCHTNFSTIEMRRPNGLNAIFEAMKGLERTHSEAM 291
Query: 529 KSYDLKDGEDNKKRLVGKFETSSYDSCRVGISDRSASIRIQKKVISEGKGYFE 687
YD G DN +RL G+ ETS D GI++R+ SIRI ++V E KGY E
Sbjct: 292 SVYDPNGGRDNLRRLTGRHETSQADKFSWGIANRACSIRIPRQVADETKGYLE 344
>AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine
synthetase (glutamate-ammonia ligase) protein 1 protein.
Length = 340
Score = 182 bits (442), Expect = 3e-46
Identities = 94/221 (42%), Positives = 124/221 (56%), Gaps = 5/221 (2%)
Frame = +1
Query: 1 TNHRVSSAITLSKICDQEPWFGIEQEYTMFDRDHWPLGWPKPRGYPDQDSKNSYCGVG-E 177
TN R + K DQEPWFG+EQE+T+ D P WP G+P YCGVG +
Sbjct: 116 TNTRQQCVDNMEKAKDQEPWFGMEQEFTLLGADKHPYNWPV-NGFPAPQGPY-YCGVGSD 173
Query: 178 HVAGREIAECHARACIYSGMDYDGSNAEVMNGSWEFQVGPTLGIKAADDIWIGRYLLNRI 357
V GR I E H RAC+Y+G+ GSN E M +E+QVGP GI+ D +W+ RY+L+RI
Sbjct: 174 RVFGRHILEAHYRACMYAGIKISGSNVESMPSQFEYQVGPCEGIEMGDQLWVSRYILHRI 233
Query: 358 AEHFDVIISFHPKPMGDGHAGIGCHHNFSTKKMRA----DQGVTEIKRICKILCDQHEKI 525
E + V+ S PKP+ +G GCH NFST MR G I+ L H
Sbjct: 234 CEDYGVVCSLDPKPVLGEWSGAGCHLNFSTNVMRTPCEDGTGWKAIEEAVVKLSKVHMHH 293
Query: 526 IKSYDLKDGEDNKKRLVGKFETSSYDSCRVGISDRSASIRI 648
I YD G DN++RL+G +T + D+ G++DR AS+RI
Sbjct: 294 IAYYDPHGGRDNERRLIGANQTETVDAFSSGVADREASVRI 334
>Z83241-2|CAB05816.2| 435|Caenorhabditis elegans Hypothetical
protein T25C8.1 protein.
Length = 435
Score = 35.1 bits (77), Expect = 0.047
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = -2
Query: 216 SGMTLSNFSPGYMFTYTTVRILRILVWIPSWLWPSQRPMITIEHCVFLFYTKPWFLVTNF 37
+G TL+ SP Y +TY++ + L IP W P + FL Y+ P FL TNF
Sbjct: 100 NGKTLT-ISPLYNWTYSSTELPAFLKTIPKWECGDLHPGFGLVTLAFLNYSNPEFL-TNF 157
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 451 KMRADQGVTEIKRICKILCDQHEKIIKSYDLK 546
KM D+ V ++++CK LC HE DLK
Sbjct: 5824 KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK 5855
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 451 KMRADQGVTEIKRICKILCDQHEKIIKSYDLK 546
KM D+ V ++++CK LC HE DLK
Sbjct: 6353 KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK 6384
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 451 KMRADQGVTEIKRICKILCDQHEKIIKSYDLK 546
KM D+ V ++++CK LC HE DLK
Sbjct: 6034 KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK 6065
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 451 KMRADQGVTEIKRICKILCDQHEKIIKSYDLK 546
KM D+ V ++++CK LC HE DLK
Sbjct: 5824 KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK 5855
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 451 KMRADQGVTEIKRICKILCDQHEKIIKSYDLK 546
KM D+ V ++++CK LC HE DLK
Sbjct: 6353 KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK 6384
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 451 KMRADQGVTEIKRICKILCDQHEKIIKSYDLK 546
KM D+ V ++++CK LC HE DLK
Sbjct: 6034 KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK 6065
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 451 KMRADQGVTEIKRICKILCDQHEKIIKSYDLK 546
KM D+ V ++++CK LC HE DLK
Sbjct: 5243 KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK 5274
>L23649-1|AAA27912.1| 568|Caenorhabditis elegans Hypothetical
protein C02C2.4 protein.
Length = 568
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -2
Query: 483 YFCDTLIGTHFLCTKIMMTSYASMSISHWLRMKANYNV 370
+FC T + HF T M + ++++ + +++ N NV
Sbjct: 58 FFCTTFMRIHFALTMTCMVNSTALAVENEIKLAGNSNV 95
>U80447-8|AAB37812.3| 900|Caenorhabditis elegans Patched related
family protein 10 protein.
Length = 900
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = -2
Query: 369 EMLCYSI*KIPTYPDI-VSCLYS*CRSYLKFPRSIHYFCIGSVVIHARIDTSSGMTLSNF 193
+ L + + I T P + + C+Y+ C L F + +FC +V + RI+ G+
Sbjct: 388 DALSFGVGTITTIPAVQIFCIYTMCALLLTFAYQLTFFC-AILVYYTRIE-EQGLHSIWL 445
Query: 192 SPGYMFTYTTVRILRI-LVWIPS 127
P TY++ L + L W+ S
Sbjct: 446 RPA--VTYSSTSPLNVKLFWLGS 466
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 70 EQEYTMFDRDHWPLGWPKPRGY 135
E + + D WPL WPKPR +
Sbjct: 18 ENDLWLDDFRDWPLDWPKPRDF 39
>Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical
protein T21C9.2 protein.
Length = 1058
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 481 IKRICKILCDQHEKIIKSYDLKDGEDNKKRLVGKFETSS 597
+KR+ +++CDQ +KI+ ++ + + KK+L+ K S
Sbjct: 358 LKRVDELVCDQSKKIV---EVHERYEQKKKLLAKLHDIS 393
>AF036702-8|AAR85905.1| 377|Caenorhabditis elegans Hypothetical
protein F33D4.5 protein.
Length = 377
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 550 GEDNKKRLV-GKFETSSYDSCRVGISDRSASI 642
G+D K+++ G+F T YD C V SD +SI
Sbjct: 198 GQDTIKKIIKGQFRTDDYDFC-VSHSDMGSSI 228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,054,735
Number of Sequences: 27780
Number of extensions: 393963
Number of successful extensions: 966
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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