Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13a02
         (703 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574...    29   3.6  
01_05_0801 + 25353708-25353914,25354307-25354429,25355035-253552...    28   6.2  
07_03_1502 + 27010328-27010509,27010715-27010973,27011989-270129...    28   8.3  
01_06_1539 + 38107108-38109649,38110563-38110915                       28   8.3  

>07_01_1133 -
           10550799-10551137,10552195-10552254,10555693-10557401,
           10557534-10557616,10577533-10578074
          Length = 910

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 80  EDSAAIVRAKSCLAASRQETVARKAARDL 166
           E+   I++ +SC+A SRQ++ A    RDL
Sbjct: 651 EEKVKIIQERSCIAQSRQKSYADNRHRDL 679


>01_05_0801 +
           25353708-25353914,25354307-25354429,25355035-25355205,
           25355303-25355392,25355497-25355583,25355664-25355719,
           25355812-25355905,25356032-25356144,25356211-25356283,
           25356603-25356683,25356865-25356951,25357031-25357135,
           25357279-25357385,25357481-25357541,25357931-25358158,
           25359720-25360677,25360816-25360997,25361237-25361326,
           25361422-25361709,25361844-25362056,25362560-25362784
          Length = 1212

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 359 GDHINSNGTLRTSHDLEED 415
           GDH+  NG L+T +DLE +
Sbjct: 809 GDHLRKNGDLKTINDLENE 827


>07_03_1502 +
           27010328-27010509,27010715-27010973,27011989-27012975,
           27013388-27013822
          Length = 620

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +2

Query: 401 DLEEDVPDRCSNEEIRNLTVDNLVSAAVD 487
           +L E + D  S++E+R LT+D L+  A+D
Sbjct: 335 NLAEILEDSKSSQELRKLTIDILIKLAMD 363


>01_06_1539 + 38107108-38109649,38110563-38110915
          Length = 964

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 347 DLQAGDHINSNGTLRTSHDLEEDVPDRCSNEEIRNLTVDNLV 472
           D+++GD  +S   L + H      P     EEI NL VDNL+
Sbjct: 650 DIESGDDSDSKWVLESFH------PPELDPEEICNLDVDNLI 685


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,754,648
Number of Sequences: 37544
Number of extensions: 297354
Number of successful extensions: 725
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)