Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13a02
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74028-6|CAI91174.1|  674|Caenorhabditis elegans Hypothetical pr...    31   0.80 
Z74028-5|CAA98427.1|  677|Caenorhabditis elegans Hypothetical pr...    31   0.80 
Z92812-7|CAB07281.2|  341|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr...    28   5.6  
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ...    28   5.6  
AL117204-24|CAB55152.1|  298|Caenorhabditis elegans Hypothetical...    28   7.4  
Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z74028-6|CAI91174.1|  674|Caenorhabditis elegans Hypothetical
           protein C14C10.3b protein.
          Length = 674

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +2

Query: 92  AIVRAKSCLAASRQETVARKAARDLFASLSNGEQYITTVQLERRIREI 235
           A +  K+CL A RQ         D F  L N   +  +VQ +++IRE+
Sbjct: 11  ATILNKTCLTAVRQSLKHTDGRFDYFRYLGNDASHAISVQKDQQIREV 58


>Z74028-5|CAA98427.1|  677|Caenorhabditis elegans Hypothetical
           protein C14C10.3a protein.
          Length = 677

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +2

Query: 92  AIVRAKSCLAASRQETVARKAARDLFASLSNGEQYITTVQLERRIREI 235
           A +  K+CL A RQ         D F  L N   +  +VQ +++IRE+
Sbjct: 11  ATILNKTCLTAVRQSLKHTDGRFDYFRYLGNDASHAISVQKDQQIREV 58


>Z92812-7|CAB07281.2|  341|Caenorhabditis elegans Hypothetical
           protein T03E6.8 protein.
          Length = 341

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/60 (21%), Positives = 30/60 (50%)
 Frame = -3

Query: 380 HYCLCDRQLVGQMVLMLVRHRLAHLPLLSYRRQENRCLRPLSSVTSYCKSLLSDVRVEPL 201
           H  LC   +V  +++ L +H+L  L  L Y ++    ++ +  +  +C  +++ V +  L
Sbjct: 105 HVVLCKSDMVSLVIMQLFKHQLVTLSDLRYTKKFELSVKIIRWLFYFCYLMMAVVAISIL 164


>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical
           protein K08E7.9 protein.
          Length = 1321

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = +2

Query: 359 GDHINSNGTLRTSHDLEEDVPDRCSNEEIRNLT 457
           GD+I+SNG ++ + D +E+V ++ S  ++   T
Sbjct: 37  GDNIDSNGEIKITRDAKEEVVNKVSIPQLYRYT 69


>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
           protein.
          Length = 1321

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = +2

Query: 359 GDHINSNGTLRTSHDLEEDVPDRCSNEEIRNLT 457
           GD+I+SNG ++ + D +E+V ++ S  ++   T
Sbjct: 37  GDNIDSNGEIKITRDAKEEVVNKVSIPQLYRYT 69


>AL117204-24|CAB55152.1|  298|Caenorhabditis elegans Hypothetical
           protein Y116A8C.37 protein.
          Length = 298

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 278 NRCLRPLSSVTSYCKSLLSDVRVEPLLCIVHHSTNWQ 168
           N+ +     +T YC  +L D     LL  V+H  NW+
Sbjct: 208 NKKVESAVGMTEYCLEILPDGCSNSLLTTVYHMHNWR 244


>Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical
           protein F57G4.1 protein.
          Length = 838

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 452 LTVDNLVSAAVDYCQGELPLVSYELTLTD 538
           LTV+N VS   D C  +  L +Y LT +D
Sbjct: 475 LTVENEVSFGFDCCDVDTNLCTYTLTFSD 503


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,974,604
Number of Sequences: 27780
Number of extensions: 268427
Number of successful extensions: 705
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)