Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12p14
         (459 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    25   0.45 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   1.8  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    22   3.2  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 24.6 bits (51), Expect = 0.45
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 91  ICESVQMWENVTKPLDLASQ 150
           +C S Q+W   T P+ LAS+
Sbjct: 85  LCGSTQLWPQPTGPVTLASR 104


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -3

Query: 205 FCFYT-LFTETF*VDYFKDLEKLSPAALLHFPTFVHFHIY*AILLNLRYYTF 53
           F F+T LF+ +   D+F+  E  +   L H+  F+  +++  +++ +  Y F
Sbjct: 69  FNFWTILFSRS---DFFQQFECDNEPKLRHYLIFIFVNVFFWVIILMSNYAF 117


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +1

Query: 85  LSICESVQMWENVTKPLDLASQDL*NSPLKKSP*IAYRNKRLGCMMEYLGFD 240
           L+ CES   +   +K +D       NSPL+K+        ++G  +E +G+D
Sbjct: 39  LTTCESNTDFSFGSKTIDFRKIQCSNSPLRKARYTEKGTCKMGREIE-VGYD 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,806
Number of Sequences: 336
Number of extensions: 2318
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)