Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12p14
         (459 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68752-3|CAE54905.1|  888|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z68752-2|CAE54904.1|  912|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z68752-1|CAA92981.1|  928|Caenorhabditis elegans Hypothetical pr...    28   3.8  

>Z68752-3|CAE54905.1|  888|Caenorhabditis elegans Hypothetical
           protein T12G3.2c protein.
          Length = 888

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -1

Query: 333 TFKPSVCI*KRLTIYELTSSRFHFSNWKGESIKSQVFHHT 214
           TFK  +C   R   YE  S+   FS W+G     Q+FH T
Sbjct: 561 TFKNVLCPHLR---YECNSTNVRFSVWRGMLELLQIFHDT 597


>Z68752-2|CAE54904.1|  912|Caenorhabditis elegans Hypothetical
           protein T12G3.2b protein.
          Length = 912

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -1

Query: 333 TFKPSVCI*KRLTIYELTSSRFHFSNWKGESIKSQVFHHT 214
           TFK  +C   R   YE  S+   FS W+G     Q+FH T
Sbjct: 561 TFKNVLCPHLR---YECNSTNVRFSVWRGMLELLQIFHDT 597


>Z68752-1|CAA92981.1|  928|Caenorhabditis elegans Hypothetical
           protein T12G3.2a protein.
          Length = 928

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -1

Query: 333 TFKPSVCI*KRLTIYELTSSRFHFSNWKGESIKSQVFHHT 214
           TFK  +C   R   YE  S+   FS W+G     Q+FH T
Sbjct: 561 TFKNVLCPHLR---YECNSTNVRFSVWRGMLELLQIFHDT 597


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,819,126
Number of Sequences: 27780
Number of extensions: 201217
Number of successful extensions: 385
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)