Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12p14
         (459 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   1.6  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   2.8  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   3.7  
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    22   3.7  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   4.8  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 136 DLASQDL*NSPLKKSP*IAYRNKRLGCMM 222
           D+A + + NSP K +    YR+  +G +M
Sbjct: 682 DVARRSVANSPTKNADSREYRSNSMGAVM 710


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 57  HLNHQNKPLEMR 22
           HL H+ KP+ MR
Sbjct: 573 HLTHKGKPIRMR 584


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 123 YIFPHLYTFTYTKPSSLTSAIT 58
           Y +P+ Y  T  +PS+   A T
Sbjct: 216 YAYPYCYNLTPNQPSAQCEATT 237


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 277 TRQFVDCESFLYTHTW 324
           T   V C++F Y+H W
Sbjct: 15  TITIVMCQTFTYSHGW 30


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 243 FHLSSWKNETYYSSIRRL*VVFIYTH 320
           FHL +  N T+YS          YTH
Sbjct: 175 FHLETHPNVTWYSQCVTFNAFPTYTH 200


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,300
Number of Sequences: 438
Number of extensions: 2387
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)