Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12p07
         (612 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    29   0.027
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    29   0.047
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    25   0.44 
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    24   1.0  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    24   1.3  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    24   1.3  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   1.8  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   7.2  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   7.2  

>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 29.5 bits (63), Expect = 0.027
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = +2

Query: 278 RIEWLLSYEYQRMWLDEREAWKKRMYPENTTVNVDIVK 391
           ++++ L + +++ W D R A+KKR   E  +V  + +K
Sbjct: 54  KMDFTLDFYFRQFWTDPRLAFKKRTGVETLSVGSEFIK 91


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 0.047
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +2

Query: 281 IEWLLSYEYQRMWLDEREAWKKRMYPENTTVNVDIVK 391
           +++ L + +++ W D R A+KKR   E  +V  + +K
Sbjct: 55  MDFTLDFYFRQFWTDPRLAFKKRTGVETLSVGSEFIK 91


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 305 YQRMWLDEREAWKKRMYPENTTVNVDIVK 391
           +++ W D R A+KKR   E  +V  + +K
Sbjct: 2   FRQFWTDPRLAFKKRTGVETLSVGSEFIK 30


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 401 KHIVLQCQRLLLYFLDTYAFSMLLFHLTTCVDIHMIA 291
           KHIV    RL+    D Y  ++LL  LTT + + ++A
Sbjct: 111 KHIV----RLVTAIGDAYGVALLLHMLTTTITLTLLA 143


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 215 CCELVCIGWISPI*YQSFVPLLKSI 141
           CC LV + W+S    QS VP   S+
Sbjct: 252 CCMLVIVSWVSFWLDQSAVPARVSL 276


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 215 CCELVCIGWISPI*YQSFVPLLKSI 141
           CC LV + W+S    QS VP   S+
Sbjct: 252 CCMLVIVSWVSFWLDQSAVPARVSL 276



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +2

Query: 278 RIEWLLSYEYQRMWLDER 331
           ++E+ +   ++  WLDER
Sbjct: 77  KMEYSVQLTFREQWLDER 94


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -3

Query: 562 MRRFLIIFVFHISHGLII 509
           M++FL+IFV+ +S  +II
Sbjct: 1   MKKFLVIFVYILSVAVII 18


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 12  VSYPIINKFFRELFKKL 62
           + Y I N  FRE FK++
Sbjct: 323 IIYSIFNTEFREAFKRI 339


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
          monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 48 LFKKLHYFLKSAFSFF 95
          LF  L+Y+L S F F+
Sbjct: 14 LFLALYYYLTSTFDFW 29


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,522
Number of Sequences: 438
Number of extensions: 3386
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)