Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12p06
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 213 8e-56
Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z67880-1|CAA91794.1| 256|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF038612-1|AAB92043.1| 348|Caenorhabditis elegans Hypothetical ... 29 3.3
Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z75544-2|CAC42316.1| 480|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z75544-1|CAA99881.1| 476|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z93379-2|CAB07592.1| 170|Caenorhabditis elegans Hypothetical pr... 27 9.9
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 213 bits (521), Expect = 8e-56
Identities = 109/214 (50%), Positives = 136/214 (63%), Gaps = 2/214 (0%)
Frame = +2
Query: 71 LESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXF--PAKDEQ 244
+E+ + L G L+E RI +GR L+ SSI + A+ EQ
Sbjct: 11 VETALAEKLDGVSLDEVERILYGRPYRA---LEISSIAEKLAQDGDFQLSGYIVDAQKEQ 67
Query: 245 TRPPRIVKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPF 424
TR PR+V+V +Q+ I PT V EQ+ AI +V +I+ A G N+I QE W MPF
Sbjct: 68 TRAPRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPF 127
Query: 425 AFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVIS 604
AFCTRE+ PW EFAES GPTT FL +LA+K+ +VI+S ILERDE+ D++WNTAVVIS
Sbjct: 128 AFCTRERLPWTEFAESVYTGPTTQFLSKLAVKHDIVIISPILERDEEKDDVIWNTAVVIS 187
Query: 605 DTGNVIGKHRKNHIPRVGDFNESXYYMEGNTGHP 706
TG VIG+ RKNHIPRVGDFNES YYME GHP
Sbjct: 188 HTGRVIGRSRKNHIPRVGDFNESTYYMESTLGHP 221
>Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical
protein C37A5.1 protein.
Length = 512
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 633 RCFPITFPVSLITTAVFQSMSECFSSLSNIEDT-ITIAYLMASSRRKVVV 487
+C P+TF ++ T + F+++ IE+T I IA L+ + V++
Sbjct: 75 KCVPLTFMLAFFVTIIVDRWKNMFANIGFIENTAIAIATLVKGTEGDVLL 124
>Z67880-1|CAA91794.1| 256|Caenorhabditis elegans Hypothetical
protein C34E7.3 protein.
Length = 256
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = -3
Query: 507 SRRKVVVGPSSADSANSHHGCFSLVQNAKGMFHNSWKQMMLTPSWPATS 361
SR K+ +S+ + HG + +V+ AK F + +++ +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245
>AF038612-1|AAB92043.1| 348|Caenorhabditis elegans Hypothetical
protein F13B6.1 protein.
Length = 348
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -2
Query: 682 VVVGFVKIADSRNVVLAMFPDHVSGVTNYNR 590
V+ GFV + DS+++V D + G+TNY++
Sbjct: 156 VLNGFVGLPDSKDMVQFFDSDSIEGLTNYDQ 186
>Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical
protein T21C9.3b protein.
Length = 565
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 329 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 463
K +F+ ++ D + +NI+ F E MP FC +Q W F
Sbjct: 46 KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90
>Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical
protein T21C9.3a protein.
Length = 501
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 329 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 463
K +F+ ++ D + +NI+ F E MP FC +Q W F
Sbjct: 46 KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90
>Z75544-2|CAC42316.1| 480|Caenorhabditis elegans Hypothetical
protein K02A11.1b protein.
Length = 480
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 356 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 511
I+ + Q G N++ NMP+ C E+ +E A G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189
>Z75544-1|CAA99881.1| 476|Caenorhabditis elegans Hypothetical
protein K02A11.1a protein.
Length = 476
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 356 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 511
I+ + Q G N++ NMP+ C E+ +E A G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189
>Z93379-2|CAB07592.1| 170|Caenorhabditis elegans Hypothetical
protein F21H7.3 protein.
Length = 170
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 329 KAIFNKVKKIIDVAGQEGVNIICFQELW 412
K +FNKVKK+++ Q+G F+ W
Sbjct: 58 KILFNKVKKLMEDVPQDGRKKNWFENFW 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,474,555
Number of Sequences: 27780
Number of extensions: 351399
Number of successful extensions: 1128
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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