BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12o02
(687 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0981 - 29391027-29391099,29391227-29391350,29391443-293915... 53 2e-07
01_01_0794 - 6184622-6185317 38 0.006
06_03_0341 + 19716846-19717349 34 0.12
12_02_0588 - 20842209-20842337,20842464-20842560,20842620-208427... 33 0.16
11_06_0168 + 20868696-20870072 33 0.28
08_02_0270 + 15108178-15108587,15108678-15108774,15109445-151094... 33 0.28
03_03_0261 + 15949984-15950427 33 0.28
08_02_1103 - 24329120-24329623 32 0.37
01_01_0795 - 6187518-6188219 32 0.49
06_01_1047 + 8249815-8250291 31 0.65
03_06_0231 + 32522898-32523524 31 1.1
01_05_0135 + 18460416-18460482,18460614-18460942 31 1.1
09_04_0521 - 18297343-18297840 30 1.5
12_02_1098 - 26067597-26068793 30 2.0
11_01_0084 - 640563-641000 30 2.0
06_03_0332 + 19652207-19652995 30 2.0
12_01_0085 - 689489-689935 29 2.6
09_06_0084 - 20755365-20755931 29 2.6
08_02_0643 + 19648114-19648612,19648690-19648787 29 2.6
07_03_0284 + 16249497-16249993,16250950-16251069,16251166-162512... 29 2.6
05_04_0257 + 19487757-19489070 29 2.6
04_04_0906 - 29297188-29297706 29 2.6
02_05_1026 - 33598275-33599561 29 2.6
01_06_1182 + 35172901-35173314 29 2.6
10_08_0150 + 15227739-15228140 29 3.5
06_03_1067 - 27326167-27326295,27326572-27326656,27326993-273270... 29 3.5
01_07_0383 - 43195095-43195322,43195408-43195638,43196134-431964... 29 3.5
11_04_0242 - 15273774-15274043,15274131-15274235 29 4.6
06_01_1013 - 7931756-7935109 29 4.6
04_03_0011 - 9347942-9348289 29 4.6
01_05_0220 - 19434011-19434802 29 4.6
12_02_0796 + 23224357-23224427,23225714-23225810,23226335-232271... 28 6.0
09_06_0222 - 21655236-21655841 28 8.0
02_05_0341 - 28115835-28116404 28 8.0
01_05_0218 - 19430404-19431189 28 8.0
>03_05_0981 -
29391027-29391099,29391227-29391350,29391443-29391576,
29391814-29391895,29391955-29392012,29392344-29392418,
29392518-29392596,29393034-29393110,29393210-29393329
Length = 273
Score = 52.8 bits (121), Expect = 2e-07
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Frame = +1
Query: 292 WDHDRDIIENISQIFDIEVFPQCERSQNTDIGNETDSQV-CSICLCVELP-DVQ------ 447
W D+ EN+S + D + P + E D QV C IC LP D +
Sbjct: 164 WSADKKFHENLSTVLDFALPPP------PSVNIEDDEQVDCGICYAKHLPIDDELGTHSG 217
Query: 448 GVPQPLCSNLSCGAYFHRTCLHMWLVTSARNRPQTFGVASGSCPSCLQAIS 600
G C N SC FH CL WL R Q+F V G+CP C ++
Sbjct: 218 GTTDYTCENPSCSRAFHSVCLRDWLRAITTTR-QSFDVLFGNCPYCSDPVA 267
>01_01_0794 - 6184622-6185317
Length = 231
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +1
Query: 385 GNETDSQVCSICLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMWLV 525
G+E D CSICLC P C +L FHR C+ MWLV
Sbjct: 135 GDECDRWECSICLCAVADGEVARQLPRCMHL-----FHRGCVDMWLV 176
>06_03_0341 + 19716846-19717349
Length = 167
Score = 33.9 bits (74), Expect = 0.12
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +1
Query: 325 SQIFDIEVFPQCERSQNTDIGNETDSQVCSICLCVELPDVQGVPQ-PLCSNLSCGAYFHR 501
S +F + V P + + + C+ICL E+ Q V Q P C++L FH
Sbjct: 76 SPVFVVAVLPAYAWRKKAAVDGDDGDGECAICLG-EVRRGQVVKQLPACTHL-----FHA 129
Query: 502 TCLHMWLVTSARNRPQTFGVASGSCPSCLQAI 597
C+ WL+TS P S + LQA+
Sbjct: 130 RCIDKWLITSQGTCP-VCRTPVDSAAAALQAV 160
>12_02_0588 -
20842209-20842337,20842464-20842560,20842620-20842733,
20843140-20843749,20844739-20845462,20845542-20845620,
20845783-20845865,20846148-20846226,20846332-20846420,
20846499-20846591,20847288-20847337,20847417-20847600,
20849227-20849542,20849626-20849657
Length = 892
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/75 (30%), Positives = 30/75 (40%)
Frame = +1
Query: 379 DIGNETDSQVCSICLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMWLVTSARNRPQTFG 558
D+GN +C IC E + L L C +HR+CL W +R F
Sbjct: 128 DVGNAAVKVMCRICFSGENEGSTKAAKMLPCKL-CNKKYHRSCLKNW----GEHR-DLFH 181
Query: 559 VASGSCPSCLQAISC 603
+S CPSC C
Sbjct: 182 WSSWVCPSCRSCEVC 196
>11_06_0168 + 20868696-20870072
Length = 458
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3
Query: 367 FFHIEEILQYQRFVKYFLLYLYHDPS**VHPVIYFARTQ 251
FFH + + Y +FV+ +++ L HDP H I FAR +
Sbjct: 217 FFHCKAFVFYDKFVRSYIVVLIHDP----HKQISFARLE 251
>08_02_0270 +
15108178-15108587,15108678-15108774,15109445-15109492,
15109583-15109806,15111367-15111463,15111556-15111651,
15112297-15112544,15112632-15112715,15112787-15113236,
15114880-15115024,15115116-15115217,15115677-15115769,
15117308-15117349,15119085-15119113,15119210-15119251,
15119922-15119997,15120764-15120835,15121208-15121326,
15121428-15121491,15121576-15123009
Length = 1323
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 409 CSICLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMWLVTSARN 540
C +C +E D LC+N +CG ++H C+ L ++RN
Sbjct: 309 CFVCGELEPSDGPNAKVFLCNNATCGHFYHPRCVAQLLHPNSRN 352
>03_03_0261 + 15949984-15950427
Length = 147
Score = 32.7 bits (71), Expect = 0.28
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 16/87 (18%)
Frame = +1
Query: 367 SQNTDIGNETDS------QVCSICLCVELPDVQGVPQPLCSNLS------CGAYFHRTCL 510
+Q+ +G E D+ Q C++CLC EL G +P + + CG FH C+
Sbjct: 25 TQHDRLGEECDAVVAPAAQECAVCLC-ELAGAAGCSEPEAAAAAVRTLPGCGHGFHAECI 83
Query: 511 HMWLVTSAR----NRPQTFGVASGSCP 579
WL A RP G A G P
Sbjct: 84 GRWLPLRAECPICRRPVVTG-ADGQAP 109
>08_02_1103 - 24329120-24329623
Length = 167
Score = 32.3 bits (70), Expect = 0.37
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 454 PQPLCSNLSCGAYFHRTCLHMWL 522
P+ + + L CG FHR CL WL
Sbjct: 109 PESVVNRLPCGHLFHRACLEKWL 131
>01_01_0795 - 6187518-6188219
Length = 233
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +1
Query: 349 FPQCERSQNTDIGNETDSQVCSICLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMWLVT 528
FP + ++ + S +C+ D + L + CG FHR C+ MWL +
Sbjct: 95 FPYVRARDDGEVSDSASSSSVECAVCLSAVDEGETVRQLPA---CGHVFHRECIDMWLSS 151
Query: 529 SA 534
A
Sbjct: 152 RA 153
>06_01_1047 + 8249815-8250291
Length = 158
Score = 31.5 bits (68), Expect = 0.65
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 349 FPQCERSQNTDIGNETDSQVCSICLCVELPDVQGVPQPLCSNL-SCGAYFHRTCLHMWLV 525
FP + T +ET + VC++CL EL + LCS + +C FHR C+ W+
Sbjct: 77 FPYAQAQGRTS-SSETQTLVCAVCL-EELRHGE-----LCSEVPACRHIFHRGCVGSWMK 129
Query: 526 TS 531
S
Sbjct: 130 KS 131
>03_06_0231 + 32522898-32523524
Length = 208
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = +1
Query: 376 TDIGNETDSQVCSICLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMWL 522
T G T CSICL D G L CG FHR C+ WL
Sbjct: 131 TKKGGATTCSCCSICL-----DNYGDGDVLRMLPECGHLFHRECVDPWL 174
>01_05_0135 + 18460416-18460482,18460614-18460942
Length = 131
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 499 RTCLHMWLVTSARNRPQTFGVASGSCPSCLQAISCNEKEI 618
RT LH+ L S RNR + C CL+ IS +++EI
Sbjct: 76 RTLLHLPLPPSHRNRCAITRICQEICHLCLETISRHDQEI 115
>09_04_0521 - 18297343-18297840
Length = 165
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 409 CSICLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMWL 522
C +CL V+ + + + L CG FHR CL WL
Sbjct: 103 CRVCL------VRFEAEAVVNRLPCGHIFHRACLETWL 134
>12_02_1098 - 26067597-26068793
Length = 398
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/25 (44%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = -3
Query: 637 NGGN-CPKFLFHYKKLLVDMKDKNH 566
NGGN C + H ++L+++++DKNH
Sbjct: 12 NGGNGCSGKVVHQRRLVINLEDKNH 36
>11_01_0084 - 640563-641000
Length = 145
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 397 DSQVCSICLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMWL 522
+S CSICL EL + + C+ ++C FH+ C++ WL
Sbjct: 68 ESSECSICLG-ELEE----GERCCTLVACRHEFHKECIYRWL 104
>06_03_0332 + 19652207-19652995
Length = 262
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 478 SCGAYFHRTCLHMWLVTSA 534
SC YFH TC+ +WL++ A
Sbjct: 120 SCKHYFHATCVDVWLLSRA 138
>12_01_0085 - 689489-689935
Length = 148
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 388 NETDSQVCSICLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMWL 522
+E+ CSICL EL + + C+ +C FH+ C++ WL
Sbjct: 67 DESSEMECSICLG-ELEE----GERCCTLAACRHEFHKECIYRWL 106
>09_06_0084 - 20755365-20755931
Length = 188
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 478 SCGAYFHRTCLHMWLVTSARNRP 546
+CG FHR C+ WL+T A P
Sbjct: 113 ACGHGFHRECVDRWLLTRAPTCP 135
>08_02_0643 + 19648114-19648612,19648690-19648787
Length = 198
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 421 LCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMWL 522
+C D+ L L CG +FHR C+ WL
Sbjct: 111 MCGSAYDIVRGGGELPETLECGHHFHRRCVRRWL 144
>07_03_0284 +
16249497-16249993,16250950-16251069,16251166-16251298,
16251867-16252031,16253289-16253459
Length = 361
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = +1
Query: 346 VFPQCERSQNTDIGNETDSQVCSICLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMWLV 525
V +C + + + C ICLC P G L C +FH TC+ WL
Sbjct: 286 VMTECGTNPPVEHFLSAEDAECCICLC---PYEDGAE---LRELPCNHHFHCTCIDKWLH 339
Query: 526 TSA 534
+A
Sbjct: 340 INA 342
>05_04_0257 + 19487757-19489070
Length = 437
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +1
Query: 448 GVPQPLCSNLSCGAYFHRTCLHMW----LVTSARNRPQTFGVASG 570
G P P C N +CG + T H+ ++T + P TF A G
Sbjct: 111 GAPSPACLNDTCGGFPENTVTHVSTSGNVITDVLSLPTTFRPAPG 155
>04_04_0906 - 29297188-29297706
Length = 172
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 391 ETDSQVCSICLC-VELPDVQGVPQPLCSNLS-CGAYFHRTCLHMWLV 525
+T + +C+ICL +E G Q + LS C FH C+ W+V
Sbjct: 106 DTSADICTICLAELEAGGGGGGCQRQVAELSSCSHAFHAACIDGWVV 152
>02_05_1026 - 33598275-33599561
Length = 428
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = +1
Query: 409 CSICLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMWLVTSARNRPQTFGVASGSCPSCL 588
C++CLC D Q P CS+ FH C+ WL++ + + + P+C
Sbjct: 123 CAVCLCEFAADDQLRLLPKCSHA-----FHLECIDTWLLSHSTCPLCRRSLLAELSPTCT 177
Query: 589 QAISCNEKE 615
+ E E
Sbjct: 178 PVVMVLESE 186
>01_06_1182 + 35172901-35173314
Length = 137
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 397 DSQVCSIC---LCVELPDVQGVPQPLCSNLS-CGAYFHRTCLHMWL 522
D +C+IC L V + D G P C L CG +H C+ +WL
Sbjct: 70 DVALCAICKGRLAVAVADGGGQP---CRRLRPCGHVYHAECIGLWL 112
>10_08_0150 + 15227739-15228140
Length = 133
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 475 LSCGAYFHRTCLHMWLVTSARNR 543
L CG FHR C+ WL R R
Sbjct: 69 LPCGHAFHRDCVDRWLALYCRRR 91
>06_03_1067 - 27326167-27326295,27326572-27326656,27326993-27327033,
27327274-27327333,27327843-27327962,27328842-27329114,
27329186-27329257,27329798-27329860,27329957-27330139,
27330544-27330660,27330734-27332683,27332770-27332907,
27333003-27333284,27334650-27335522
Length = 1461
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Frame = -3
Query: 550 FGVDSLH----W*PTTYVSRSCENMLHKINCCIKAGAH----LEHQVIQHTNRCYKLVNL 395
FG+D +H P V R+C +I+ CIKA A LE++++Q + CY V+
Sbjct: 1390 FGIDPIHIDDPLCPANNVGRNC----FRIHQCIKAFADAFTVLENELLQFSAECYTPVSS 1445
Query: 394 FH 389
F+
Sbjct: 1446 FN 1447
>01_07_0383 - 43195095-43195322,43195408-43195638,43196134-43196454,
43196512-43196589,43196664-43197727,43197813-43198503,
43198743-43199541,43200010-43200158,43200159-43200286,
43200389-43200494,43200835-43200843,43201332-43201821,
43201896-43202554,43203759-43203851,43204044-43204196,
43205092-43205194,43205376-43205467,43206229-43206306,
43206987-43207049,43207339-43207512
Length = 1902
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 409 CSICLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMWLVTSARN 540
C IC + +P+ C +C FH CL+ W TS ++
Sbjct: 1852 CPICYSILHTSNHSLPRLACK--TCRHKFHGACLYKWFSTSNKS 1893
>11_04_0242 - 15273774-15274043,15274131-15274235
Length = 124
Score = 28.7 bits (61), Expect = 4.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 403 QVCSICLCVELPDVQGVPQPLCSNLSC 483
Q+C++C C P +P P C ++C
Sbjct: 74 QICAVCTCCGGPHGVCIPAPCCYAINC 100
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/65 (24%), Positives = 27/65 (41%)
Frame = +1
Query: 424 CVELPDVQGVPQPLCSNLSCGAYFHRTCLHMWLVTSARNRPQTFGVASGSCPSCLQAISC 603
C+ D+ P+ S SC + FH C+ W + A + +S CP C +
Sbjct: 156 CMICYDMVRRSAPVWSCGSCFSIFHLPCIRKWARSPASAADASDPDSSWRCPGCQSVHAV 215
Query: 604 NEKEI 618
+E+
Sbjct: 216 PAREL 220
>04_03_0011 - 9347942-9348289
Length = 115
Score = 28.7 bits (61), Expect = 4.6
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +1
Query: 310 IIENISQIFDIEVFPQCERSQNTDIGNETDSQVCSICLC-VELPDVQGVPQPLCSNLSCG 486
++ IS++ I++ E Q ++ G CS+CL + + + L C
Sbjct: 4 LLSYISKMLCIKI--PSEARQASEDGGSGGLTECSVCLSRIRVGEAT-------RRLPCR 54
Query: 487 AYFHRTCLHMWLVTSARNRP--QTFGVASGSCP 579
FHR C+ WL++ R P + + V G+ P
Sbjct: 55 HAFHRDCVDRWLLSCRRTCPLCRVYVVVDGNKP 87
>01_05_0220 - 19434011-19434802
Length = 263
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 409 CSICLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMWLV 525
C ICL + D G+ P+ L CG FH C+ WL+
Sbjct: 185 CGICL--DDLDADGLTTPV--RLPCGHAFHGQCIAGWLL 219
>12_02_0796 +
23224357-23224427,23225714-23225810,23226335-23227146,
23227593-23227619,23227620-23229624
Length = 1003
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/52 (23%), Positives = 27/52 (51%)
Frame = +1
Query: 322 ISQIFDIEVFPQCERSQNTDIGNETDSQVCSICLCVELPDVQGVPQPLCSNL 477
+ ++ +I++ S ++GN T ++ +C C+ D+ G + L +NL
Sbjct: 729 LQEVSEIKISRNSSASSLQELGNLTKLKILGLCWCIS--DIHGGTKTLVNNL 778
>09_06_0222 - 21655236-21655841
Length = 201
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 481 CGAYFHRTCLHMWLVTSARNRPQTFGVASGSCPSCLQAI 597
CG FH C+ +WLV+++ +CPSC +AI
Sbjct: 125 CGHGFHAACVDVWLVSTS------------TCPSCRRAI 151
>02_05_0341 - 28115835-28116404
Length = 189
Score = 27.9 bits (59), Expect = 8.0
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 385 GNETDSQVCSICLCVELPDVQGVPQ-PLCSNLSCGAYFHRTCLHMWLVTSARNRPQTFGV 561
G +++ C+ICL VE D Q V P C + FH C+ WL
Sbjct: 92 GGGGEAEECAICL-VEFEDGQAVRVLPQCDHR-----FHAACIDTWL------------R 133
Query: 562 ASGSCPSCLQAISCNE 609
A SCPSC + + E
Sbjct: 134 AHSSCPSCRRVLVAAE 149
>01_05_0218 - 19430404-19431189
Length = 261
Score = 27.9 bits (59), Expect = 8.0
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 10/70 (14%)
Frame = +1
Query: 409 CSICLCVELPDVQGVPQPLCSNLSCGAYFHRTCLHMWL---VTSARNRPQTFGVASG--- 570
C ICL + P +NL CG FH C+ WL T R G+A+
Sbjct: 174 CGICLDGLTASERCKTPP--ANLPCGHAFHPPCITRWLFKGTTCPICRDDLTGLAAAPWE 231
Query: 571 ----SCPSCL 588
SCP C+
Sbjct: 232 SGVMSCPGCI 241
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,642,979
Number of Sequences: 37544
Number of extensions: 343358
Number of successful extensions: 999
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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