Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12n12
(651 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 36 0.13
AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein. 36 0.13
AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein. 36 0.13
AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein prot... 36 0.17
AF055136-1|AAC26019.1| 2155|Homo sapiens alpha-tectorin protein. 36 0.17
EF025894-1|ABJ98522.1| 2721|Homo sapiens zonadhesin isoform 6 pr... 35 0.22
AY046055-6|AAL04412.1| 2601|Homo sapiens zonadhesin splice varia... 35 0.22
AY046055-5|AAL04415.1| 2689|Homo sapiens zonadhesin splice varia... 35 0.22
AY046055-4|AAL04414.1| 2624|Homo sapiens zonadhesin splice varia... 35 0.22
AY046055-3|AAL04410.1| 2724|Homo sapiens zonadhesin splice varia... 35 0.22
AY046055-2|AAL04411.1| 2812|Homo sapiens zonadhesin splice varia... 35 0.22
AY046055-1|AAL04413.1| 2721|Homo sapiens zonadhesin splice varia... 35 0.22
AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein. 35 0.22
AF332980-1|AAK01436.1| 2721|Homo sapiens zonadhesin variant 6 pr... 35 0.22
AF332979-1|AAK01435.1| 2601|Homo sapiens zonadhesin variant 5 pr... 35 0.22
AF332978-1|AAK01434.1| 2624|Homo sapiens zonadhesin variant 4 pr... 35 0.22
AF332977-1|AAK01433.1| 2812|Homo sapiens zonadhesin variant 3 pr... 35 0.22
AF332976-1|AAK01432.1| 2689|Homo sapiens zonadhesin variant 2 pr... 35 0.22
AF332975-1|AAK01431.1| 2724|Homo sapiens zonadhesin variant 1 pr... 35 0.22
AF053356-1|AAC78790.1| 2379|Homo sapiens zonadhesin protein. 35 0.22
AK123170-1|BAC85547.1| 330|Homo sapiens protein ( Homo sapiens ... 33 0.67
AK128214-1|BAC87330.1| 1508|Homo sapiens protein ( Homo sapiens ... 33 0.88
BC060868-1|AAH60868.1| 685|Homo sapiens BMPER protein protein. 32 2.0
AY324650-1|AAP89012.1| 685|Homo sapiens crossveinless-2 protein. 32 2.0
AK122706-1|BAC85504.1| 814|Homo sapiens ISOFORM. protein. 32 2.0
AK096150-1|BAC04712.1| 685|Homo sapiens protein ( Homo sapiens ... 32 2.0
AB075845-1|BAB85551.1| 565|Homo sapiens KIAA1965 protein protein. 32 2.0
Z94057-1|CAI21650.1| 1358|Homo sapiens tenascin R (restrictin, j... 31 2.7
Z94055-1|CAI19943.1| 1358|Homo sapiens tenascin R (restrictin, j... 31 2.7
Z67996-1|CAA91947.1| 1358|Homo sapiens tenascin-R (restrictin) p... 31 2.7
X98085-1|CAA66709.1| 1358|Homo sapiens tenascin-R protein. 31 2.7
BC129830-1|AAI29831.1| 1257|Homo sapiens TNR protein protein. 31 2.7
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 480 PNEV-FEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDD 614
PN + + C CA+ +C N + H R C +C GC C E + DD
Sbjct: 339 PNNMQYHECRSPCAD-TCSN-QEHSRACEDHCVAGCFCPEGTVLDD 382
Score = 32.3 bits (70), Expect = 1.5
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 558 CY-PYCEPGCVCEEPYIRDDRTHQCVLPQDC 647
CY P C PGCVC + + D C+ +DC
Sbjct: 834 CYSPQCVPGCVCPDGLVADGE-GGCITAEDC 863
>AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein.
Length = 1373
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 480 PNEV-FEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDD 614
PN + + C CA+ +C N + H R C +C GC C E + DD
Sbjct: 341 PNNMQYHECRSPCAD-TCSN-QEHSRACEDHCVAGCFCPEGTVLDD 384
Score = 32.3 bits (70), Expect = 1.5
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 558 CY-PYCEPGCVCEEPYIRDDRTHQCVLPQDC 647
CY P C PGCVC + + D C+ +DC
Sbjct: 836 CYSPQCVPGCVCPDGLVADGE-GGCITAEDC 865
>AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein.
Length = 1104
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 480 PNEV-FEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDD 614
PN + + C CA+ +C N + H R C +C GC C E + DD
Sbjct: 339 PNNMQYHECRSPCAD-TCSN-QEHSRACEDHCVAGCFCPEGTVLDD 382
Score = 32.3 bits (70), Expect = 1.5
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 558 CY-PYCEPGCVCEEPYIRDDRTHQCVLPQDC 647
CY P C PGCVC + + D C+ +DC
Sbjct: 834 CYSPQCVPGCVCPDGLVADGE-GGCITAEDC 863
>AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein
protein.
Length = 1569
Score = 35.5 bits (78), Expect = 0.17
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 456 KIVKACYWPNEVFEPCFGGCAEVSCDNPRSHLRPCYPY-CEPGCVCEEPYIRDDRTHQCV 632
K K+C ++ E FG +C + + C P CEPGCVC E + ++ QCV
Sbjct: 767 KTFKSC---SQSSENKFGAACAPTCQMLATGVA-CVPTKCEPGCVCAEG-LYENAYGQCV 821
Query: 633 LPQDC 647
P++C
Sbjct: 822 PPEEC 826
>AF055136-1|AAC26019.1| 2155|Homo sapiens alpha-tectorin protein.
Length = 2155
Score = 35.5 bits (78), Expect = 0.17
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +3
Query: 480 PNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDDRTHQCVLPQDC 647
PN +E C C + C R C YC GC C+ Y+ + ++ C+LP C
Sbjct: 1374 PNSHYESCVSVC-QPRCAAIRLK-SDCSHYCVEGCHCDAGYVLNGKS--CILPHSC 1425
>EF025894-1|ABJ98522.1| 2721|Homo sapiens zonadhesin isoform 6
protein.
Length = 2721
Score = 35.1 bits (77), Expect = 0.22
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 480 PNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDDRTHQCVLPQDCS 650
PN +E C SC +PR C P C GCVC ++ D + C+ C+
Sbjct: 1046 PNARYESC---ACPASCKSPRPS---CGPLCREGCVCNPGFLFSD--NHCIQASSCN 1094
>AY046055-6|AAL04412.1| 2601|Homo sapiens zonadhesin splice variant 5
protein.
Length = 2601
Score = 35.1 bits (77), Expect = 0.22
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 480 PNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDDRTHQCVLPQDCS 650
PN +E C SC +PR C P C GCVC ++ D + C+ C+
Sbjct: 1046 PNARYESC---ACPASCKSPRPS---CGPLCREGCVCNPGFLFSD--NHCIQASSCN 1094
>AY046055-5|AAL04415.1| 2689|Homo sapiens zonadhesin splice variant 2
protein.
Length = 2689
Score = 35.1 bits (77), Expect = 0.22
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 480 PNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDDRTHQCVLPQDCS 650
PN +E C SC +PR C P C GCVC ++ D + C+ C+
Sbjct: 1046 PNARYESC---ACPASCKSPRPS---CGPLCREGCVCNPGFLFSD--NHCIQASSCN 1094
>AY046055-4|AAL04414.1| 2624|Homo sapiens zonadhesin splice variant 4
protein.
Length = 2624
Score = 35.1 bits (77), Expect = 0.22
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 480 PNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDDRTHQCVLPQDCS 650
PN +E C SC +PR C P C GCVC ++ D + C+ C+
Sbjct: 1046 PNARYESC---ACPASCKSPRPS---CGPLCREGCVCNPGFLFSD--NHCIQASSCN 1094
>AY046055-3|AAL04410.1| 2724|Homo sapiens zonadhesin splice variant 1
protein.
Length = 2724
Score = 35.1 bits (77), Expect = 0.22
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 480 PNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDDRTHQCVLPQDCS 650
PN +E C SC +PR C P C GCVC ++ D + C+ C+
Sbjct: 1046 PNARYESC---ACPASCKSPRPS---CGPLCREGCVCNPGFLFSD--NHCIQASSCN 1094
>AY046055-2|AAL04411.1| 2812|Homo sapiens zonadhesin splice variant 3
protein.
Length = 2812
Score = 35.1 bits (77), Expect = 0.22
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 480 PNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDDRTHQCVLPQDCS 650
PN +E C SC +PR C P C GCVC ++ D + C+ C+
Sbjct: 1046 PNARYESC---ACPASCKSPRPS---CGPLCREGCVCNPGFLFSD--NHCIQASSCN 1094
>AY046055-1|AAL04413.1| 2721|Homo sapiens zonadhesin splice variant 6
protein.
Length = 2721
Score = 35.1 bits (77), Expect = 0.22
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 480 PNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDDRTHQCVLPQDCS 650
PN +E C SC +PR C P C GCVC ++ D + C+ C+
Sbjct: 1046 PNARYESC---ACPASCKSPRPS---CGPLCREGCVCNPGFLFSD--NHCIQASSCN 1094
>AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein.
Length = 1283
Score = 35.1 bits (77), Expect = 0.22
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 483 NEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDDRTHQCVLP 638
N + C C + +C NP+ + C +C GC C + DD TH LP
Sbjct: 293 NMQHQECGSPCTD-TCSNPQ-RAQLCEDHCVDGCFCPPGTVLDDITHSGCLP 342
>AF332980-1|AAK01436.1| 2721|Homo sapiens zonadhesin variant 6
protein.
Length = 2721
Score = 35.1 bits (77), Expect = 0.22
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 480 PNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDDRTHQCVLPQDCS 650
PN +E C SC +PR C P C GCVC ++ D + C+ C+
Sbjct: 1046 PNARYESC---ACPASCKSPRPS---CGPLCREGCVCNPGFLFSD--NHCIQASSCN 1094
>AF332979-1|AAK01435.1| 2601|Homo sapiens zonadhesin variant 5
protein.
Length = 2601
Score = 35.1 bits (77), Expect = 0.22
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 480 PNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDDRTHQCVLPQDCS 650
PN +E C SC +PR C P C GCVC ++ D + C+ C+
Sbjct: 1046 PNARYESC---ACPASCKSPRPS---CGPLCREGCVCNPGFLFSD--NHCIQASSCN 1094
>AF332978-1|AAK01434.1| 2624|Homo sapiens zonadhesin variant 4
protein.
Length = 2624
Score = 35.1 bits (77), Expect = 0.22
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 480 PNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDDRTHQCVLPQDCS 650
PN +E C SC +PR C P C GCVC ++ D + C+ C+
Sbjct: 1046 PNARYESC---ACPASCKSPRPS---CGPLCREGCVCNPGFLFSD--NHCIQASSCN 1094
>AF332977-1|AAK01433.1| 2812|Homo sapiens zonadhesin variant 3
protein.
Length = 2812
Score = 35.1 bits (77), Expect = 0.22
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 480 PNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDDRTHQCVLPQDCS 650
PN +E C SC +PR C P C GCVC ++ D + C+ C+
Sbjct: 1046 PNARYESC---ACPASCKSPRPS---CGPLCREGCVCNPGFLFSD--NHCIQASSCN 1094
>AF332976-1|AAK01432.1| 2689|Homo sapiens zonadhesin variant 2
protein.
Length = 2689
Score = 35.1 bits (77), Expect = 0.22
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 480 PNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDDRTHQCVLPQDCS 650
PN +E C SC +PR C P C GCVC ++ D + C+ C+
Sbjct: 1046 PNARYESC---ACPASCKSPRPS---CGPLCREGCVCNPGFLFSD--NHCIQASSCN 1094
>AF332975-1|AAK01431.1| 2724|Homo sapiens zonadhesin variant 1
protein.
Length = 2724
Score = 35.1 bits (77), Expect = 0.22
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 480 PNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDDRTHQCVLPQDCS 650
PN +E C SC +PR C P C GCVC ++ D + C+ C+
Sbjct: 1046 PNARYESC---ACPASCKSPRPS---CGPLCREGCVCNPGFLFSD--NHCIQASSCN 1094
>AF053356-1|AAC78790.1| 2379|Homo sapiens zonadhesin protein.
Length = 2379
Score = 35.1 bits (77), Expect = 0.22
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 480 PNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDDRTHQCVLPQDCS 650
PN +E C SC +PR C P C GCVC ++ D + C+ C+
Sbjct: 957 PNARYESC---ACPASCKSPRPS---CGPLCREGCVCNPGFLFSD--NHCIQASSCN 1005
>AK123170-1|BAC85547.1| 330|Homo sapiens protein ( Homo sapiens
cDNA FLJ41175 fis, clone BRACE2042550, highly similar
to Bos taurus mRNA for SCO-spondin. ).
Length = 330
Score = 33.5 bits (73), Expect = 0.67
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 468 ACYWPNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDDRTHQCVLPQDC 647
+C P E F C CA + + L P C+PGC C + + ++ C+ P++C
Sbjct: 85 SCTPPFE-FHACGSPCAGLCATHLSHQLCQDLPPCQPGCYCPKGLL--EQAGGCIPPEEC 141
Query: 648 S 650
+
Sbjct: 142 N 142
>AK128214-1|BAC87330.1| 1508|Homo sapiens protein ( Homo sapiens
cDNA FLJ46346 fis, clone TESTI4047328, moderately
similar to Mus musculus otogelin (Otog). ).
Length = 1508
Score = 33.1 bits (72), Expect = 0.88
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 471 CYWPNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCV--CEEPYIRDDRTHQCVLPQD 644
C W ++ C C + +C +PR+ P E GCV C P + D+ T +CV +D
Sbjct: 415 CEWR---YDACASPCFQ-TCRDPRAASCRDVPRVE-GCVPVCPTPQVLDEVTQRCVYLED 469
Query: 645 C 647
C
Sbjct: 470 C 470
>BC060868-1|AAH60868.1| 685|Homo sapiens BMPER protein protein.
Length = 685
Score = 31.9 bits (69), Expect = 2.0
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +3
Query: 522 VSCDNPRSHLRPCYPYCEPGCVCE 593
V C NP HL C P C PGCV E
Sbjct: 147 VHCKNPLEHLGMCCPTC-PGCVFE 169
>AY324650-1|AAP89012.1| 685|Homo sapiens crossveinless-2 protein.
Length = 685
Score = 31.9 bits (69), Expect = 2.0
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +3
Query: 522 VSCDNPRSHLRPCYPYCEPGCVCE 593
V C NP HL C P C PGCV E
Sbjct: 147 VHCKNPLEHLGMCCPTC-PGCVFE 169
>AK122706-1|BAC85504.1| 814|Homo sapiens ISOFORM. protein.
Length = 814
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = +3
Query: 429 VFTNGR---DEDKIVKACYWPNEVFEPCFGGCAEVSCDNPRSHLRPCYPYCEPGCVCEEP 599
V+ NG+ D D AC+ + C +C P+S C P C P C+ EE
Sbjct: 489 VYANGQNFTDADSPCHACHCQDGTVTCSLVDCPPTTCARPQSGPGQCCPRC-PDCILEEE 547
Query: 600 YIRD 611
D
Sbjct: 548 VFVD 551
>AK096150-1|BAC04712.1| 685|Homo sapiens protein ( Homo sapiens
cDNA FLJ38831 fis, clone MESAN1000126, weakly similar to
Drosophila melanogaster Crossveinless 2 (CV-2) mRNA. ).
Length = 685
Score = 31.9 bits (69), Expect = 2.0
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +3
Query: 522 VSCDNPRSHLRPCYPYCEPGCVCE 593
V C NP HL C P C PGCV E
Sbjct: 147 VHCKNPLEHLGMCCPTC-PGCVFE 169
>AB075845-1|BAB85551.1| 565|Homo sapiens KIAA1965 protein protein.
Length = 565
Score = 31.9 bits (69), Expect = 2.0
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +3
Query: 522 VSCDNPRSHLRPCYPYCEPGCVCE 593
V C NP HL C P C PGCV E
Sbjct: 27 VHCKNPLEHLGMCCPTC-PGCVFE 49
>Z94057-1|CAI21650.1| 1358|Homo sapiens tenascin R (restrictin,
janusin) protein.
Length = 1358
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 CAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDD-RTHQCVLPQDCS 650
C+E+ C S C + CVCEEPY +D R +C P DCS
Sbjct: 230 CSELRCPTDCSSRGLCV---DGECVCEEPYTGEDCRELRC--PGDCS 271
>Z94055-1|CAI19943.1| 1358|Homo sapiens tenascin R (restrictin,
janusin) protein.
Length = 1358
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 CAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDD-RTHQCVLPQDCS 650
C+E+ C S C + CVCEEPY +D R +C P DCS
Sbjct: 230 CSELRCPTDCSSRGLCV---DGECVCEEPYTGEDCRELRC--PGDCS 271
>Z67996-1|CAA91947.1| 1358|Homo sapiens tenascin-R (restrictin)
protein.
Length = 1358
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 CAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDD-RTHQCVLPQDCS 650
C+E+ C S C + CVCEEPY +D R +C P DCS
Sbjct: 230 CSELRCPTDCSSRGLCV---DGECVCEEPYTGEDCRELRC--PGDCS 271
>X98085-1|CAA66709.1| 1358|Homo sapiens tenascin-R protein.
Length = 1358
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 CAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDD-RTHQCVLPQDCS 650
C+E+ C S C + CVCEEPY +D R +C P DCS
Sbjct: 230 CSELRCPTDCSSRGLCV---DGECVCEEPYTGEDCRELRC--PGDCS 271
>BC129830-1|AAI29831.1| 1257|Homo sapiens TNR protein protein.
Length = 1257
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 CAEVSCDNPRSHLRPCYPYCEPGCVCEEPYIRDD-RTHQCVLPQDCS 650
C+E+ C S C + CVCEEPY +D R +C P DCS
Sbjct: 129 CSELRCPTDCSSRGLCV---DGECVCEEPYTGEDCRELRC--PGDCS 170
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,170,092
Number of Sequences: 237096
Number of extensions: 1959545
Number of successful extensions: 3816
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3811
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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