Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12n06
         (661 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51587-1|AAB81549.1|  767|Homo sapiens Golgi complex autoantigen...    30   8.4  
BC150274-1|AAI50275.1| 1981|Homo sapiens CASP8AP2 protein protein.     30   8.4  
BC132830-1|AAI32831.1| 1982|Homo sapiens CASP8 associated protei...    30   8.4  
BC132828-1|AAI32829.1| 1982|Homo sapiens CASP8 associated protei...    30   8.4  
BC056685-1|AAH56685.1|  370|Homo sapiens CASP8AP2 protein protein.     30   8.4  
BC032853-1|AAH32853.1|  767|Homo sapiens golgi autoantigen, golg...    30   8.4  
AL645487-1|CAH72345.1| 3117|Homo sapiens centrosomal protein 350...    30   8.4  
AL590632-2|CAI15177.1| 3117|Homo sapiens centrosomal protein 350...    30   8.4  
AL590632-1|CAM21477.1|  130|Homo sapiens centrosomal protein 350...    30   8.4  
AL451125-2|CAI14346.1|  767|Homo sapiens golgi autoantigen, golg...    30   8.4  
AL390718-1|CAI14833.1| 3117|Homo sapiens centrosomal protein 350...    30   8.4  
AL354928-1|CAI39632.1|  767|Homo sapiens golgi autoantigen, golg...    30   8.4  
AL353692-6|CAI16239.1| 1964|Homo sapiens CASP8 associated protei...    30   8.4  
AF387614-1|AAL91355.1|  130|Homo sapiens gm133 protein.                30   8.4  
AF287356-1|AAL55733.1| 3117|Homo sapiens centrosome-associated p...    30   8.4  
AF164678-1|AAD45537.2| 1982|Homo sapiens FLASH homolog RIP25 pro...    30   8.4  
AF154415-1|AAF03367.1| 1982|Homo sapiens FLASH protein.                30   8.4  
AB208858-1|BAD92095.1|  400|Homo sapiens golgin 97 variant protein.    30   8.4  
AB037736-1|BAA92553.2| 1981|Homo sapiens KIAA1315 protein protein.     30   8.4  

>U51587-1|AAB81549.1|  767|Homo sapiens Golgi complex autoantigen
           golgin-97 protein.
          Length = 767

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +3

Query: 261 RSSVDFRRQVLRVEQQLLERTKALEA 338
           + S   ++Q L +EQQ LERT+ALEA
Sbjct: 392 QESSHVQQQALALEQQFLERTQALEA 417


>BC150274-1|AAI50275.1| 1981|Homo sapiens CASP8AP2 protein protein.
          Length = 1981

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 504 VNPEWEGDDTNIPTNNRVDAKDKEKSMKRIKRRTVTIERSKVKLQ 638
           +N  WE +     +++RVD++  +K ++R   R+  I R +VK Q
Sbjct: 318 INSSWEKETPGERSHSRVDSQ-SDKKLERQSERSQNINRKEVKSQ 361


>BC132830-1|AAI32831.1| 1982|Homo sapiens CASP8 associated protein 2
           protein.
          Length = 1982

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 504 VNPEWEGDDTNIPTNNRVDAKDKEKSMKRIKRRTVTIERSKVKLQ 638
           +N  WE +     +++RVD++  +K ++R   R+  I R +VK Q
Sbjct: 318 INSSWEKETPGERSHSRVDSQ-SDKKLERQSERSQNINRKEVKSQ 361


>BC132828-1|AAI32829.1| 1982|Homo sapiens CASP8 associated protein 2
           protein.
          Length = 1982

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 504 VNPEWEGDDTNIPTNNRVDAKDKEKSMKRIKRRTVTIERSKVKLQ 638
           +N  WE +     +++RVD++  +K ++R   R+  I R +VK Q
Sbjct: 318 INSSWEKETPGERSHSRVDSQ-SDKKLERQSERSQNINRKEVKSQ 361


>BC056685-1|AAH56685.1|  370|Homo sapiens CASP8AP2 protein protein.
          Length = 370

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 504 VNPEWEGDDTNIPTNNRVDAKDKEKSMKRIKRRTVTIERSKVKLQ 638
           +N  WE +     +++RVD++  +K ++R   R+  I R +VK Q
Sbjct: 318 INSSWEKETPGERSHSRVDSQ-SDKKLERQSERSQNINRKEVKSQ 361


>BC032853-1|AAH32853.1|  767|Homo sapiens golgi autoantigen, golgin
           subfamily a, 1 protein.
          Length = 767

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +3

Query: 261 RSSVDFRRQVLRVEQQLLERTKALEA 338
           + S   ++Q L +EQQ LERT+ALEA
Sbjct: 392 QESSHVQQQALALEQQFLERTQALEA 417


>AL645487-1|CAH72345.1| 3117|Homo sapiens centrosomal protein 350kDa
           protein.
          Length = 3117

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 216 AQWSTAICDQCIDTLRSSVDFRRQVLRVEQQLLE 317
           A  STA+CD  +DT +SS    R++ R + + L+
Sbjct: 51  APTSTAVCDSVMDTKKSSTSATRKISRKDGRYLD 84


>AL590632-2|CAI15177.1| 3117|Homo sapiens centrosomal protein 350kDa
           protein.
          Length = 3117

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 216 AQWSTAICDQCIDTLRSSVDFRRQVLRVEQQLLE 317
           A  STA+CD  +DT +SS    R++ R + + L+
Sbjct: 51  APTSTAVCDSVMDTKKSSTSATRKISRKDGRYLD 84


>AL590632-1|CAM21477.1|  130|Homo sapiens centrosomal protein 350kDa
           protein.
          Length = 130

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 216 AQWSTAICDQCIDTLRSSVDFRRQVLRVEQQLLE 317
           A  STA+CD  +DT +SS    R++ R + + L+
Sbjct: 50  APTSTAVCDSVMDTKKSSTSATRKISRKDGRYLD 83


>AL451125-2|CAI14346.1|  767|Homo sapiens golgi autoantigen, golgin
           subfamily a, 1 protein.
          Length = 767

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +3

Query: 261 RSSVDFRRQVLRVEQQLLERTKALEA 338
           + S   ++Q L +EQQ LERT+ALEA
Sbjct: 392 QESSHVQQQALALEQQFLERTQALEA 417


>AL390718-1|CAI14833.1| 3117|Homo sapiens centrosomal protein 350kDa
           protein.
          Length = 3117

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 216 AQWSTAICDQCIDTLRSSVDFRRQVLRVEQQLLE 317
           A  STA+CD  +DT +SS    R++ R + + L+
Sbjct: 51  APTSTAVCDSVMDTKKSSTSATRKISRKDGRYLD 84


>AL354928-1|CAI39632.1|  767|Homo sapiens golgi autoantigen, golgin
           subfamily a, 1 protein.
          Length = 767

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +3

Query: 261 RSSVDFRRQVLRVEQQLLERTKALEA 338
           + S   ++Q L +EQQ LERT+ALEA
Sbjct: 392 QESSHVQQQALALEQQFLERTQALEA 417


>AL353692-6|CAI16239.1| 1964|Homo sapiens CASP8 associated protein 2
           protein.
          Length = 1964

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 504 VNPEWEGDDTNIPTNNRVDAKDKEKSMKRIKRRTVTIERSKVKLQ 638
           +N  WE +     +++RVD++  +K ++R   R+  I R +VK Q
Sbjct: 318 INSSWEKETPGERSHSRVDSQ-SDKKLERQSERSQNINRKEVKSQ 361


>AF387614-1|AAL91355.1|  130|Homo sapiens gm133 protein.
          Length = 130

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 216 AQWSTAICDQCIDTLRSSVDFRRQVLRVEQQLLE 317
           A  STA+CD  +DT +SS    R++ R + + L+
Sbjct: 50  APTSTAVCDSVMDTKKSSTSATRKISRKDGRYLD 83


>AF287356-1|AAL55733.1| 3117|Homo sapiens centrosome-associated
           protein 350 protein.
          Length = 3117

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 216 AQWSTAICDQCIDTLRSSVDFRRQVLRVEQQLLE 317
           A  STA+CD  +DT +SS    R++ R + + L+
Sbjct: 51  APTSTAVCDSVMDTKKSSTSATRKISRKDGRYLD 84


>AF164678-1|AAD45537.2| 1982|Homo sapiens FLASH homolog RIP25
           protein.
          Length = 1982

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 504 VNPEWEGDDTNIPTNNRVDAKDKEKSMKRIKRRTVTIERSKVKLQ 638
           +N  WE +     +++RVD++  +K ++R   R+  I R +VK Q
Sbjct: 318 INSSWEKETPGERSHSRVDSQ-SDKKLERQSERSQNINRKEVKSQ 361


>AF154415-1|AAF03367.1| 1982|Homo sapiens FLASH protein.
          Length = 1982

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 504 VNPEWEGDDTNIPTNNRVDAKDKEKSMKRIKRRTVTIERSKVKLQ 638
           +N  WE +     +++RVD++  +K ++R   R+  I R +VK Q
Sbjct: 318 INSSWEKETPGERSHSRVDSQ-SDKKLERQSERSQNINRKEVKSQ 361


>AB208858-1|BAD92095.1|  400|Homo sapiens golgin 97 variant protein.
          Length = 400

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +3

Query: 261 RSSVDFRRQVLRVEQQLLERTKALEA 338
           + S   ++Q L +EQQ LERT+ALEA
Sbjct: 291 QESSHVQQQALALEQQFLERTQALEA 316


>AB037736-1|BAA92553.2| 1981|Homo sapiens KIAA1315 protein protein.
          Length = 1981

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 504 VNPEWEGDDTNIPTNNRVDAKDKEKSMKRIKRRTVTIERSKVKLQ 638
           +N  WE +     +++RVD++  +K ++R   R+  I R +VK Q
Sbjct: 318 INSSWEKETPGERSHSRVDSQ-SDKKLERQSERSQNINRKEVKSQ 361


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,665,538
Number of Sequences: 237096
Number of extensions: 1805186
Number of successful extensions: 5020
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5020
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)