Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12m23
         (522 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92831-6|CAB07365.2|  355|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z92777-12|CAJ58496.1|  355|Caenorhabditis elegans Hypothetical p...    29   1.5  
Z81516-6|CAB04206.1|  524|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z75535-5|CAA99829.1|  524|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U97592-1|AAB52871.3|  638|Caenorhabditis elegans Temporarily ass...    28   3.5  
Z81568-7|CAD18874.1|  497|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z92831-6|CAB07365.2|  355|Caenorhabditis elegans Hypothetical
           protein F22G12.1 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 12/41 (29%), Positives = 26/41 (63%)
 Frame = +2

Query: 122 IHKMEREHEVLSETGTNCNIASVSETMSDINQTKLDTLEKK 244
           + ++E++ E L +  T  ++ +  ETM  +N+TK + ++KK
Sbjct: 108 VREIEQQREALEKQRTE-DLVNHQETMRKLNETKFEAIKKK 147


>Z92777-12|CAJ58496.1|  355|Caenorhabditis elegans Hypothetical
           protein F22G12.1 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 12/41 (29%), Positives = 26/41 (63%)
 Frame = +2

Query: 122 IHKMEREHEVLSETGTNCNIASVSETMSDINQTKLDTLEKK 244
           + ++E++ E L +  T  ++ +  ETM  +N+TK + ++KK
Sbjct: 108 VREIEQQREALEKQRTE-DLVNHQETMRKLNETKFEAIKKK 147


>Z81516-6|CAB04206.1|  524|Caenorhabditis elegans Hypothetical
           protein F26H9.1 protein.
          Length = 524

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +2

Query: 344 CLRPFPPAFMKSG--IKDMDELLXVITDVPALDLVLQQLDNLEAL 472
           CL+ F     +SG  I  + +++   T+ P  D+VL+Q+D++ A+
Sbjct: 204 CLKSFMTLAYESGALIAGLGKMIHAFTNRPDEDIVLEQIDDIVAM 248


>Z75535-5|CAA99829.1|  524|Caenorhabditis elegans Hypothetical
           protein F26H9.1 protein.
          Length = 524

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +2

Query: 344 CLRPFPPAFMKSG--IKDMDELLXVITDVPALDLVLQQLDNLEAL 472
           CL+ F     +SG  I  + +++   T+ P  D+VL+Q+D++ A+
Sbjct: 204 CLKSFMTLAYESGALIAGLGKMIHAFTNRPDEDIVLEQIDDIVAM 248


>U97592-1|AAB52871.3|  638|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 150, isoform b protein.
          Length = 638

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 158 ETGTNCNIASVSETMSDINQTKLDTLEKKAVHLRLVLEK 274
           E GTN NI  + +T S +NQ  L T  + +  L L+ E+
Sbjct: 133 EEGTNLNIEFLKDTTSPMNQLLLLTTIETSTLLNLIEER 171


>Z81568-7|CAD18874.1|  497|Caenorhabditis elegans Hypothetical
           protein K08E3.5d protein.
          Length = 497

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 338 ESCLRPFPPAFMKSGIKDMDELLXVITDVPALDLVLQQLDNL 463
           E  +RP+       G K    ++ V  D+  LDL +QQ+  L
Sbjct: 98  EGAIRPYKSLGTSMGCKGPKSVISVRNDLTFLDLTMQQIQTL 139


>Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical
           protein B0240.3 protein.
          Length = 1093

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 54  TIQNCQL*IHTNLKLQTEGNVCLFIKWRESTRCY-QKRVPIV 176
           T+ NC L  H  +KL   G   L +KW+ S + + +   P++
Sbjct: 540 TLHNCMLDSHWIVKLSGFGVNRLLVKWKTSGQIFTEDHTPVI 581


>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
           protein R193.2 protein.
          Length = 1853

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 504 NNKSMISLIFGNASKLSNCCSTKSKAGTSVITLS 403
           NN  +I    GN  KLSNCC   +    +V  L+
Sbjct: 760 NNNLVIFFARGNYEKLSNCCPDPTADAAAVRQLA 793


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,480,120
Number of Sequences: 27780
Number of extensions: 208320
Number of successful extensions: 533
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)