Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12m13
         (436 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   4.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   4.5  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   7.9  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   7.9  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   7.9  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   7.9  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   7.9  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 163  GLHPDNFVLH 134
            GLHP+N +LH
Sbjct: 1729 GLHPNNTLLH 1738


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 163  GLHPDNFVLH 134
            GLHP+N +LH
Sbjct: 1725 GLHPNNTLLH 1734


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 405 NKYNSNCEK 431
           N YN+NC+K
Sbjct: 103 NNYNNNCKK 111


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 405 NKYNSNCEK 431
           N YN+NC+K
Sbjct: 103 NNYNNNCKK 111


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 405 NKYNSNCEK 431
           N YN+NC+K
Sbjct: 103 NNYNNNCKK 111


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 405 NKYNSNCEK 431
           N YN+NC+K
Sbjct: 103 NNYNNNCKK 111


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 405 NKYNSNCEK 431
           N YN+NC+K
Sbjct: 345 NNYNNNCKK 353


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,505
Number of Sequences: 438
Number of extensions: 1786
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)