Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12m11
(659 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 38 0.002
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 33 0.028
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 33 0.028
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 33 0.036
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 31 0.15
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 31 0.15
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 31 0.19
SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|c... 30 0.26
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 29 0.45
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 29 0.78
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 28 1.0
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 27 1.8
SPBC36.08c |cog2||Golgi transport complex subunit Cog2 |Schizosa... 27 1.8
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.4
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 2.4
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 2.4
SPAC212.01c |||S. pombe specific DUF999 family protein 2|Schizos... 27 3.2
SPBCPT2R1.04c |||S. pombe specific DUF999 protein family 10|Schi... 27 3.2
SPAC212.04c |||S. pombe specific DUF999 family protein 1|Schizos... 27 3.2
SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein fa... 27 3.2
SPAC977.06 |||S. pombe specific DUF999 family protein 3|Schizosa... 27 3.2
SPBC1348.01 |||S. pombe specific DUF999 protein family 5|Schizos... 27 3.2
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 27 3.2
SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 3.2
SPAC750.06c |||S. pombe specific DUF999 protein family 4|Schizos... 27 3.2
SPBPB2B2.07c |||S. pombe specific DUF999 protein family 7|Schizo... 27 3.2
SPBC1348.07 |||S. pombe specific DUF999 protein family 6|Schizos... 27 3.2
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 3.2
SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces p... 26 4.2
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 26 4.2
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 26 4.2
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 26 4.2
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 26 4.2
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 5.5
SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces pomb... 26 5.5
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 26 5.5
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 26 5.5
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 25 7.3
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 25 7.3
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 25 9.7
SPAC105.01c |||potassium ion/proton antiporter|Schizosaccharomyc... 25 9.7
SPAC926.02 |||conserved fungal protein|Schizosaccharomyces pombe... 25 9.7
SPAC3A12.18 |zwf1|SPAC9.01|glucose-6-phosphate 1-dehydrogenase |... 25 9.7
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 37.5 bits (83), Expect = 0.002
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Frame = +1
Query: 220 NLEKYSSLHKMSTADENTSTLLGVLKHISTELTFEEQI------ELNEVFLQKIQNKLPV 381
NL+KYSS + A TS L VL+H+ +E + E + N VF Q +
Sbjct: 286 NLKKYSSFLALKEAVSMTSEQLRVLEHLLSECSHEINVLSQQSKNFNGVFESSYQPLIND 345
Query: 382 LVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLKDQENEKVEL 522
L Q+ ++ N +K E +L++ ++ K K K +++ EL
Sbjct: 346 LDHQISVMQNDEKRINNAKTELSLSLEKKLEAKKQKEKVYKDKLDEL 392
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 33.5 bits (73), Expect = 0.028
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 325 EQIELNEVFLQKIQNKLPVLVTQLEQLKLS-RHTSNESKKEKIKALKESIDTKLNKLKDQ 501
EQ+E L + +L L +QL+ S + S+ + EKI A + ++L KLK
Sbjct: 193 EQLETKCKELAAAEQQLQELSVHNQQLEESIKQVSSSIELEKINAEQRLQISELEKLKAA 252
Query: 502 ENEKVELMMEWLNHRLLEVSKFNDDSSELLTLKTRVLELKSKILHLXI 645
+ E++E + N+R +E+ K ++ ++L + R E + K+ L +
Sbjct: 253 QEERIEKLSS--NNRNVEILK--EEKNDLESKLYRFEEYRDKVATLEL 296
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 33.5 bits (73), Expect = 0.028
Identities = 32/103 (31%), Positives = 52/103 (50%)
Frame = +1
Query: 316 TFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLK 495
T E I N+ L + + +L LV+ L+ + S+ ++K K ++ KES+ L KLK
Sbjct: 767 TQERLISENDKLLAE-RERLMSLVSDLQTFLNQQQLSDAARKVKFESEKESLSLSLQKLK 825
Query: 496 DQENEKVELMMEWLNHRLLEVSKFNDDSSELLTLKTRVLELKS 624
+ NEK+ + L + LE S S +KT +LE +S
Sbjct: 826 -ESNEKMSNDLHSL-QKSLEKSGIEYSS----RIKTLMLEKQS 862
Score = 29.9 bits (64), Expect = 0.34
Identities = 28/128 (21%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Frame = +1
Query: 307 TELTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLN 486
TE+ EE++E +V Q++ + +L++ +L R N+ ++++KAL+E++ +
Sbjct: 1493 TEIPNEEEMERKKVMQQEVLRLRSRIAKELQKNELLR-KQNQVLQDQVKALQETVVSSEE 1551
Query: 487 --------KLKDQEN-EKVELMMEWLNHRLL--EVSKFNDDSSELLTLKTRVLELKSKIL 633
KD EN +K E M+ + +S F+ +++ T + E + +IL
Sbjct: 1552 AESASVHADTKDLENLKKTEEMLSVTFQVIFNESISDFSTSTADFTTFVQKEWEKRREIL 1611
Query: 634 HLXILQNI 657
+ + +
Sbjct: 1612 QKDVEEQV 1619
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 33.1 bits (72), Expect = 0.036
Identities = 30/137 (21%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Frame = +1
Query: 223 LEKYSSLHKMSTADENTSTLLGVLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQ 402
LEK + L K E + L + + +EQ+ ++ +Q + ++L + +QLEQ
Sbjct: 722 LEKLNDLEKSLVLSERSKDELD-----ESYKSLQEQLASKKIEVQNVSSQLSICNSQLEQ 776
Query: 403 LKLSRHTSNESKKEKIKALKESIDTKLNKLKDQENEKVELMMEWLNHRLLEVSKFNDD-S 579
S H + K E + L S+ KL K+ + + H ++ N + +
Sbjct: 777 ---SNHIVDNLKSENL--LLTSVKDKLKADLSNLESKLSSLQQDNFHMKAQIESSNQEYT 831
Query: 580 SELLTLKTRVLELKSKI 630
+ + ++ +R+LEL + +
Sbjct: 832 ATVDSMNSRILELSNDL 848
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 31.1 bits (67), Expect = 0.15
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Frame = +1
Query: 247 KMSTADENTSTLLGVLKHISTELT-FEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHT 423
KM D +L L+ + TE + ++ L + L K Q + ++L HT
Sbjct: 793 KMEATDMLNVSLHESLRSVQTENSELVTEMALLKAELVKKQAIIDANANIYDKLTAD-HT 851
Query: 424 SNESKKEKIKA-LKESIDTKLNKLKDQENEKVELMMEWL---NHRLLEVSKFNDDSSELL 591
+ E+ I LKE++D LN D +N ++EL+ + + N +L + K + S +
Sbjct: 852 NYETVSADINQNLKETLDKLLNGSSDFKNNEIELLHDQIRITNAKLEKREKLINASKYIE 911
Query: 592 -TLKTRVLELKSKILHL 639
TL++ + E K+ +L
Sbjct: 912 DTLRSEIQEAAEKVSNL 928
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 31.1 bits (67), Expect = 0.15
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 403 LKLSRHTSNESKKEKIKALKESIDTKLNKLKDQENEKVELM 525
+KL + SNE +KE+I + T L +L+ QE + EL+
Sbjct: 766 VKLPQQPSNEDEKERITTADYADSTSLERLESQEPNRNELV 806
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 30.7 bits (66), Expect = 0.19
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 391 QLEQLKLSRHTSN-ESKKEKIKALKESIDTKLNKLKDQENEKVEL 522
++E+ +L + S KEKI+ L E ID++L K+ +EN + +L
Sbjct: 38 EIEKKRLQKVRKEISSVKEKIRRLDERIDSRLTKISVKENFRKQL 82
>SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 216
Score = 30.3 bits (65), Expect = 0.26
Identities = 18/83 (21%), Positives = 34/83 (40%)
Frame = +1
Query: 289 VLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKES 468
V H E F + L F ++ N QL +L+ + S+ K++ L
Sbjct: 115 VALHSQVEQLFSDVERLKTSFRDQLNNSTSEARLQLNIDRLNHYDETASQDLKLRELSAE 174
Query: 469 IDTKLNKLKDQENEKVELMMEWL 537
IDT+++ + Q ++W+
Sbjct: 175 IDTEMSNFRTQLASFKTQTLQWV 197
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 29.5 bits (63), Expect = 0.45
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +1
Query: 343 EVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLKDQENEKVEL 522
E L N+L + +T++ + S + +S + S+D +++LKD +N ++
Sbjct: 637 EELLNTHSNQLLISMTKITEHFQSLDEALQSARSSCAVPNSSLDLIVSELKDSKNSLLDA 696
Query: 523 MMEWLNHRLLEVSKF-NDDSSELLTLKTRVLE-LKSKILHLXILQNI 657
+ L + K N SSEL+ L+ + E + + L L N+
Sbjct: 697 LEHSLQDISMSSQKLGNGISSELIELQKDMKESYRQLVQELRSLYNL 743
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 28.7 bits (61), Expect = 0.78
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 526 MEWLNHRLLEVSK--FNDDSSELLTLKTRVLE 615
M+WLN +LEVSK D EL+ T++ E
Sbjct: 36 MDWLNEHMLEVSKLQLESDIYELVRTPTKIKE 67
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 28.3 bits (60), Expect = 1.0
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +1
Query: 256 TADENTSTLLGVLKH-ISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNE 432
++++ T+ ++ LK I+T EE+ E EV Q IQ+ + +++ R +
Sbjct: 2 SSNKVTAAIIDYLKQAITTGSISEEEKESLEVAAQCIQDSFKIKPEEIKPKSGDRLVAAF 61
Query: 433 SKKEKIKALKESIDTKLNKLKDQENEKVEL 522
+ EK+ ++E +NK +E EK++L
Sbjct: 62 EEYEKLHPVEEDSTAHVNK---EEAEKLKL 88
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 532 WLNHRLLEVSKFNDDSSELLTLKTRVLELKSKILHLXILQNI 657
WLN +L + +D ++ L+TR+L+L SK++ L ++I
Sbjct: 296 WLN--ILSSQRADDKEFDVNQLETRILQLFSKVVQLCKSEDI 335
>SPBC36.08c |cog2||Golgi transport complex subunit Cog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 191
Score = 27.5 bits (58), Expect = 1.8
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 388 TQLEQLKLSRHTSNESKKEKIKAL---KESIDTKLNKLKDQENEKVELMMEWLNHRLLEV 558
T++ L S H S E K ++L I L +D ENEK+ L ++L+
Sbjct: 88 TKVSTLISSIHRSEEQLKNSKQSLIGHSTEIQNNLKHKQDVENEKLIASNLLLLDQILKF 147
Query: 559 SKFNDDSSEL 588
K ND S L
Sbjct: 148 LKSNDSSHPL 157
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 391 QLEQLKLSRHTSNESKKEKIKALKESID 474
+LE+ + H NE K +KIK LKE I+
Sbjct: 148 ELEKQVKTLHDLNEQKDKKIKELKERIN 175
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.1 bits (57), Expect = 2.4
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 322 EEQIELNEVFLQKIQNKLPVL-VTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLKD 498
EE + E K N L L +T+ E L + NE K+ I ALKES K N K
Sbjct: 634 EENNKAKEDSTSKTSNLLEQLKMTEAEVDSLRKE--NEENKQVI-ALKESELVKSNDNKL 690
Query: 499 QENEKVELMMEWLNHRLLEVSKFNDDSSEL 588
NE++E + + L+ E+ L
Sbjct: 691 LLNEQIESLNDQLSQLKTEMESVTTSKESL 720
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.1 bits (57), Expect = 2.4
Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Frame = +1
Query: 265 ENTSTLLGVLKHISTELTFEEQIELNEVFLQKIQN-----KLPVLVTQLEQLKLSRHTSN 429
E L V K + T L + +LNE+ + +N K+ + + ++L
Sbjct: 496 ETNIRLQEVTKELET-LRMKNSNDLNEIHDLREENEGLTLKIDSITKEKDRLINELEQRI 554
Query: 430 ESKKEKIKALKESIDTKLNKLKDQENEKVELMMEWLNHRLLEVSKFNDDSSEL 588
+S + + L +ID NKLKD+E E +M ++ ++ +F++ ++L
Sbjct: 555 KSYEVNVSELNGTIDEYRNKLKDKE-ETYNEVMNAFQYKDNDLRRFHESINKL 606
>SPAC212.01c |||S. pombe specific DUF999 family protein
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 26.6 bits (56), Expect = 3.2
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 394 LEQ-LKLSRHTSNESKKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKF 567
LEQ L L + + ++ + ++S+ T K KD+ N K + E+LN E SKF
Sbjct: 30 LEQGLDLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEFLNDLFTEFSKF 89
Query: 568 ND 573
++
Sbjct: 90 HN 91
>SPBCPT2R1.04c |||S. pombe specific DUF999 protein family
10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 280
Score = 26.6 bits (56), Expect = 3.2
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 394 LEQ-LKLSRHTSNESKKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKF 567
LEQ L L + + ++ + ++S+ T K KD+ N K + E+LN E SKF
Sbjct: 30 LEQGLDLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEFLNDLFTEFSKF 89
Query: 568 ND 573
++
Sbjct: 90 HN 91
>SPAC212.04c |||S. pombe specific DUF999 family protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 288
Score = 26.6 bits (56), Expect = 3.2
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 394 LEQ-LKLSRHTSNESKKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKF 567
LEQ L L + + ++ + ++S+ T K KD+ N K + E+LN E SKF
Sbjct: 30 LEQGLDLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEFLNDLFTEFSKF 89
Query: 568 ND 573
++
Sbjct: 90 HN 91
>SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein
family 9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 26.6 bits (56), Expect = 3.2
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 394 LEQ-LKLSRHTSNESKKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKF 567
LEQ L L + + ++ + ++S+ T K KD+ N K + E+LN E SKF
Sbjct: 30 LEQGLDLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEFLNDLFTEFSKF 89
Query: 568 ND 573
++
Sbjct: 90 HN 91
>SPAC977.06 |||S. pombe specific DUF999 family protein
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 189
Score = 26.6 bits (56), Expect = 3.2
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 436 KKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKFND 573
K EK+ K+++ T + K KD+ N K + + +LN+ E SKF+D
Sbjct: 18 KPEKVN--KQNLFTNIIKPQKDKINIKTDKIKFFLNNLFTEFSKFHD 62
>SPBC1348.01 |||S. pombe specific DUF999 protein family
5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 26.6 bits (56), Expect = 3.2
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 394 LEQ-LKLSRHTSNESKKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKF 567
LEQ L L + + ++ + ++S+ T K KD+ N K + E+LN E SKF
Sbjct: 30 LEQGLDLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEFLNDLFTEFSKF 89
Query: 568 ND 573
++
Sbjct: 90 HN 91
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 466 SIDTKLNKLKDQENEKVELMMEW 534
S D + +D ENEKVEL+ W
Sbjct: 1056 SSDGTIKLYRDYENEKVELVTSW 1078
>SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 433
Score = 26.6 bits (56), Expect = 3.2
Identities = 14/68 (20%), Positives = 35/68 (51%)
Frame = +1
Query: 343 EVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLKDQENEKVEL 522
++ L+++ ++ V+ Q EQL L + ++++E ++ ++ + ++QE E
Sbjct: 24 QMALEELNQQIEVIQRQEEQLALRKKAIEDARQEVLQQIQHRKFRQYLHEREQEARLQEY 83
Query: 523 MMEWLNHR 546
+E L R
Sbjct: 84 YLEQLQER 91
>SPAC750.06c |||S. pombe specific DUF999 protein family
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 26.6 bits (56), Expect = 3.2
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 394 LEQ-LKLSRHTSNESKKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKF 567
LEQ L L + + ++ + ++S+ T K KD+ N K + E+LN E SKF
Sbjct: 30 LEQGLDLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEFLNDPFTEFSKF 89
Query: 568 ND 573
++
Sbjct: 90 HN 91
>SPBPB2B2.07c |||S. pombe specific DUF999 protein family
7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 165
Score = 26.6 bits (56), Expect = 3.2
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 436 KKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKFND 573
K EK+ K+++ T + K KD+ N K + + +LN+ E SKF+D
Sbjct: 38 KPEKVN--KQNLFTNIIKPQKDKINIKTDKIKFFLNNLFTEFSKFHD 82
>SPBC1348.07 |||S. pombe specific DUF999 protein family
6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 3.2
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 436 KKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKFND 573
K EK+ K+++ T + K KD+ N K + + +LN+ E SKF+D
Sbjct: 18 KPEKVN--KQNLFTNIVKPQKDKINIKTDKIKFFLNNLFTEFSKFHD 62
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.6 bits (56), Expect = 3.2
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 289 VLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQ-LEQLKLSRHTSNESKKEKIKALKE 465
+++ +ST ++ + ++ L KL L+ + LK SR TSN +E++ LKE
Sbjct: 320 LIEDLSTRISEFDNLKSERDTLSIKNEKLEKLLRNTIGSLKDSR-TSNSQLEEEMVELKE 378
Query: 466 SIDTKLNKLKDQENE 510
S T ++L D E++
Sbjct: 379 SNRTIHSQLTDAESK 393
Score = 25.0 bits (52), Expect = 9.7
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 364 QNKLPVLVTQLEQ-LKLSRHTSNESKKEKIKALKESIDTKLNKLKDQENEK 513
QNK ++EQ L+ ++S+ KEK AL + D +LN L++Q E+
Sbjct: 453 QNKKIKDFEKIEQDLRACLNSSSNELKEK-SALIDKKDQELNNLREQIKEQ 502
>SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 404
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 325 EQIELN-EVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLK 495
EQ+ +N + L+ ++++ V+ + L L + S + K EKI +L + T K+K
Sbjct: 21 EQLRINFKHILRHLEHESHVINSTLTTLISQENASMDEKIEKIDSLLSRVSTVKKKMK 78
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 280 LLGVLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKAL 459
L VLK + T L + ++ VF ++ L+T+++Q L + E+ +AL
Sbjct: 10 LPNVLKRLETGLIIPQLKDILRVFGLRLSGTKAELITRIKQ--LIERIAIENNTTSWEAL 67
Query: 460 KESID 474
K++ID
Sbjct: 68 KKAID 72
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 337 LNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNES 435
LNE+ + I K+PVL + + L + +T++ S
Sbjct: 955 LNELLIDDIDGKMPVLFKRFKNLSSAENTTSFS 987
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/88 (20%), Positives = 40/88 (45%)
Frame = +1
Query: 265 ENTSTLLGVLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKE 444
E+T T +G ++ T E+ N+ + + + +T EQ + +SKK+
Sbjct: 235 EDTFTTIGPQNSLTVNSTIEKHKSDNKKTFGTLVSFVEPTITGSEQSDYRQIKIKKSKKK 294
Query: 445 KIKALKESIDTKLNKLKDQENEKVELMM 528
K K+ + +L+ + EN+ + ++
Sbjct: 295 KSKSDRRKRLVELDAENENENDPSDFVL 322
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 26.2 bits (55), Expect = 4.2
Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Frame = +1
Query: 355 QKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESI---DTKLNKLKDQENEKVELM 525
+ ++++L TQ++ S TSN K++I +LK+++ + + +L EK M
Sbjct: 424 ESLKSRLLQSRTQMQTELDSYITSNSQLKDEITSLKQTVSESEAERKRLFSSAQEKQLQM 483
Query: 526 MEWLNHRLLEVSKFNDDSSELLTLKTRVLELKSKIL 633
E +N +L + + N++ L + L+ K + L
Sbjct: 484 KETVN-KLTSLQEQNNEFDRQLKEQEEDLQNKEEEL 518
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 25.8 bits (54), Expect = 5.5
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +1
Query: 343 EVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLKDQENEKVEL 522
E FL ++ + LEQL+ + E K K +K ++ E+
Sbjct: 1136 EAFLVDLKAIPEISRFNLEQLEQDCNDICERMKNVEKDFSNEGIFSNHKALHPDDHICEV 1195
Query: 523 MMEWLNHRLLEVSKFNDDSSEL-LTLKTRVL 612
M+ W+ V + N D +EL TLKT +L
Sbjct: 1196 MVPWIPSGKSMVDELNSDITELKTTLKTTLL 1226
>SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 25.8 bits (54), Expect = 5.5
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +1
Query: 325 EQIELNEVFLQKIQNKLPVLVTQLEQL---KLSRHTSNESKKEKIKALKESIDTKLNK 489
E I++N + ++ + N+ + +LE L L N +K+ A+KE ++T+LNK
Sbjct: 430 EDIKINSLRVESLVNEY-LKTNRLECLPEDSLGEAVVNFVEKDDRDAIKECVETQLNK 486
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 25.8 bits (54), Expect = 5.5
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Frame = +1
Query: 247 KMSTADENTSTLLGVLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTS 426
+ S A T LG + E+T E++ ++NE F +K + + +
Sbjct: 9 RRSRASSPTPARLGGYAPLRVEITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGF 68
Query: 427 NESKKEKIKALKESIDTKLNKLKDQENEKVELMMEWLNHR--LLEVSK----FNDDSSEL 588
N K E +K L++ T L Q + V +M E + R L E+ + F+DD +
Sbjct: 69 NAEKSEVLKILRDFDKTGKGYL--QMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGK 126
Query: 589 LTLK 600
++L+
Sbjct: 127 ISLR 130
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 25.8 bits (54), Expect = 5.5
Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +1
Query: 385 VTQLEQLKLSRHTSN---ESKKEKIKALKESIDTKLNKLKDQENEKVELMMEWLNHRLLE 555
++++E L+ S SN +S K +++ALK + K K++ + E + E + +
Sbjct: 227 LSRIEMLESSLAKSNSLLDSSKSEMEALKAKSISDATKHKNEIFQLEEKLHEASHEAEIS 286
Query: 556 VSKFNDDSSELLTLK 600
+ K ND + + L+
Sbjct: 287 IKKLNDAENRIKELE 301
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 25.4 bits (53), Expect = 7.3
Identities = 18/89 (20%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +1
Query: 268 NTSTLLGVLKHISTELTFEEQIELNEVFLQKIQNKLP-VLVTQLEQLKLSRHTSNESKKE 444
N + L +L+ E++I E + + + +L V + E+ +L + KKE
Sbjct: 246 NVTALQKMLEEKRAREEEEQRIREEEARIAEEEKRLAEVEEARKEEARLKKKEKERKKKE 305
Query: 445 KIKALKESIDTKLNKLKDQENEKVELMME 531
++KA + + K + + +++ M+E
Sbjct: 306 EMKAQGKYLSKKQKEQQALAQRRLQQMLE 334
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/59 (25%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +1
Query: 412 SRHTSNESKKEKIKALKESIDTKLNKLKD----QENEKVELMMEWLNHRLLEVSKFNDD 576
SR + + KKE+++ + ++N+LK+ + EK+ ++E + ++VSK + D
Sbjct: 371 SRKRARDRKKERLEEASQKRLEEVNRLKNLKRKELEEKLNQVIEIAGSKNIDVSKLDLD 429
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 25.0 bits (52), Expect = 9.7
Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = +1
Query: 313 LTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKL 492
LTFE I+ V + ++ +L L+ T+ E +E I + K+N +
Sbjct: 335 LTFESMIDSVLVARDRFLAPSGIMAPSETRLVLTATTNTELLEEPIDFWSDVYGFKMNGM 394
Query: 493 KDQENEKVELMM---EWLNHRLLEVSKFN 570
KD + V + + ++N + + ++FN
Sbjct: 395 KDASYKGVSVQVVPQTYVNAKPVVFARFN 423
>SPAC105.01c |||potassium ion/proton antiporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 898
Score = 25.0 bits (52), Expect = 9.7
Identities = 7/20 (35%), Positives = 16/20 (80%)
Frame = -2
Query: 340 LVQFVPQMLVQLKYVLEHPV 281
LVQ++P++ +L +++ HP+
Sbjct: 445 LVQYLPELPTRLSFLINHPL 464
>SPAC926.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 443
Score = 25.0 bits (52), Expect = 9.7
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 304 STELTFEE--QIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDT 477
S++ +EE I+ ++ + + LVT++ L S ES EK+ + I
Sbjct: 174 SSQQKYEEIPDIQARRLYFIEADKEASTLVTEIASLACSCKLLEESDFEKLCQIMLPITE 233
Query: 478 KLNKLK 495
KL+ LK
Sbjct: 234 KLDILK 239
>SPAC3A12.18 |zwf1|SPAC9.01|glucose-6-phosphate 1-dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 500
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 361 IQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLKD 498
+QN L ++T L + ++++ + EK+K L+ T+L LKD
Sbjct: 244 VQNHLVQILTLLTMETPTTFSADDLRDEKVKVLRR---TRLGDLKD 286
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.130 0.339
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,921,170
Number of Sequences: 5004
Number of extensions: 30017
Number of successful extensions: 159
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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