Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12m08
(722 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U83460-1|AAB66306.1| 190|Homo sapiens high-affinity copper upta... 103 6e-22
BC013611-1|AAH13611.1| 190|Homo sapiens solute carrier family 3... 103 6e-22
AL449305-4|CAI10965.1| 190|Homo sapiens solute carrier family 3... 103 6e-22
AK222866-1|BAD96586.1| 190|Homo sapiens solute carrier family 3... 103 6e-22
BC004315-1|AAH04315.1| 81|Homo sapiens Unknown (protein for IM... 79 1e-14
AK131546-1|BAD18680.1| 199|Homo sapiens protein ( Homo sapiens ... 46 1e-04
AL449305-5|CAI10966.1| 188|Homo sapiens solute carrier family 3... 44 4e-04
U83461-1|AAB66307.1| 143|Homo sapiens putative copper uptake pr... 43 0.001
CR407615-1|CAG28543.1| 143|Homo sapiens SLC31A2 protein. 43 0.001
BC026252-1|AAH26252.1| 143|Homo sapiens solute carrier family 3... 43 0.001
AL449105-3|CAO78192.1| 143|Homo sapiens solute carrier family 3... 43 0.001
BC061924-1|AAH61924.1| 134|Homo sapiens SLC31A1 protein protein. 42 0.002
BC131613-1|AAI31614.1| 292|Homo sapiens keratin associated prot... 33 1.0
BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated prot... 33 1.0
BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated prot... 33 1.0
AB076356-1|BAD01543.1| 292|Homo sapiens keratin associated prot... 33 1.0
AB076351-1|BAD01538.1| 401|Homo sapiens keratin associated prot... 33 1.0
AF382388-1|AAK60270.1| 478|Homo sapiens vitronectin protein. 31 5.5
X05006-1|CAA28659.1| 478|Homo sapiens protein ( Human S-protein... 30 7.3
X03168-1|CAA26933.1| 478|Homo sapiens protein ( Human mRNA for ... 30 7.3
BC120960-1|AAI20961.1| 282|Homo sapiens keratin associated prot... 30 7.3
BC120959-1|AAI20960.1| 282|Homo sapiens keratin associated prot... 30 7.3
BC005046-1|AAH05046.1| 478|Homo sapiens vitronectin protein. 30 7.3
AL139287-7|CAI23176.1| 514|Homo sapiens cleavage and polyadenyl... 30 7.3
AK021939-1|BAB13943.1| 499|Homo sapiens protein ( Homo sapiens ... 30 7.3
AB076347-1|BAD01534.1| 282|Homo sapiens keratin associated prot... 30 7.3
>U83460-1|AAB66306.1| 190|Homo sapiens high-affinity copper uptake
protein protein.
Length = 190
Score = 103 bits (247), Expect = 6e-22
Identities = 62/137 (45%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Frame = +3
Query: 258 EILFQGWKTTNALELFGSAVAIFLAGVLYEGLKYYREALHTRASSASDSRVNITKSECGT 437
E+LF G A E+ G+ VA+FL + YEGLK RE+L R S S R N
Sbjct: 55 ELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESL-LRKSQVS-IRYNSMPVPGPN 112
Query: 438 NSPCAGT-AVVKYSMLSGGHIIQTCLHFIQSTASYMLMLIFMTYNVWLCXXXXXXXXXXY 614
+ T V MLS H++QT LH IQ SY LMLIFMTYN +LC Y
Sbjct: 113 GTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGY 172
Query: 615 FFFGWKKNTVVDMTEHC 665
F F WKK VVD+TEHC
Sbjct: 173 FLFSWKKAVVVDITEHC 189
>BC013611-1|AAH13611.1| 190|Homo sapiens solute carrier family 31
(copper transporters), member 1 protein.
Length = 190
Score = 103 bits (247), Expect = 6e-22
Identities = 62/137 (45%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Frame = +3
Query: 258 EILFQGWKTTNALELFGSAVAIFLAGVLYEGLKYYREALHTRASSASDSRVNITKSECGT 437
E+LF G A E+ G+ VA+FL + YEGLK RE+L R S S R N
Sbjct: 55 ELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESL-LRKSQVS-IRYNSMPVPGPN 112
Query: 438 NSPCAGT-AVVKYSMLSGGHIIQTCLHFIQSTASYMLMLIFMTYNVWLCXXXXXXXXXXY 614
+ T V MLS H++QT LH IQ SY LMLIFMTYN +LC Y
Sbjct: 113 GTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGY 172
Query: 615 FFFGWKKNTVVDMTEHC 665
F F WKK VVD+TEHC
Sbjct: 173 FLFSWKKAVVVDITEHC 189
>AL449305-4|CAI10965.1| 190|Homo sapiens solute carrier family 31
(copper transporters), member 1 protein.
Length = 190
Score = 103 bits (247), Expect = 6e-22
Identities = 62/137 (45%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Frame = +3
Query: 258 EILFQGWKTTNALELFGSAVAIFLAGVLYEGLKYYREALHTRASSASDSRVNITKSECGT 437
E+LF G A E+ G+ VA+FL + YEGLK RE+L R S S R N
Sbjct: 55 ELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESL-LRKSQVS-IRYNSMPVPGPN 112
Query: 438 NSPCAGT-AVVKYSMLSGGHIIQTCLHFIQSTASYMLMLIFMTYNVWLCXXXXXXXXXXY 614
+ T V MLS H++QT LH IQ SY LMLIFMTYN +LC Y
Sbjct: 113 GTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGY 172
Query: 615 FFFGWKKNTVVDMTEHC 665
F F WKK VVD+TEHC
Sbjct: 173 FLFSWKKAVVVDITEHC 189
>AK222866-1|BAD96586.1| 190|Homo sapiens solute carrier family 31
(copper transporters), member 1 variant protein.
Length = 190
Score = 103 bits (247), Expect = 6e-22
Identities = 62/137 (45%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Frame = +3
Query: 258 EILFQGWKTTNALELFGSAVAIFLAGVLYEGLKYYREALHTRASSASDSRVNITKSECGT 437
E+LF G A E+ G+ VA+FL + YEGLK RE+L R S S R N
Sbjct: 55 ELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESL-LRKSQVS-IRYNSMPVPGPN 112
Query: 438 NSPCAGT-AVVKYSMLSGGHIIQTCLHFIQSTASYMLMLIFMTYNVWLCXXXXXXXXXXY 614
+ T V MLS H++QT LH IQ SY LMLIFMTYN +LC Y
Sbjct: 113 GTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGGGTGY 172
Query: 615 FFFGWKKNTVVDMTEHC 665
F F WKK VVD+TEHC
Sbjct: 173 FLFSWKKAVVVDITEHC 189
>BC004315-1|AAH04315.1| 81|Homo sapiens Unknown (protein for
IMAGE:3628031) protein.
Length = 81
Score = 79.4 bits (187), Expect = 1e-14
Identities = 37/67 (55%), Positives = 41/67 (61%)
Frame = +3
Query: 465 VKYSMLSGGHIIQTCLHFIQSTASYMLMLIFMTYNVWLCXXXXXXXXXXYFFFGWKKNTV 644
V MLS H++QT LH IQ SY LMLIFMTYN +LC YF F WKK V
Sbjct: 14 VGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLFSWKKAVV 73
Query: 645 VDMTEHC 665
VD+TEHC
Sbjct: 74 VDITEHC 80
>AK131546-1|BAD18680.1| 199|Homo sapiens protein ( Homo sapiens
cDNA FLJ16782 fis, clone BRTHA3024233, highly similar
to Probable low-affinity copper uptake protein 2. ).
Length = 199
Score = 46.4 bits (105), Expect = 1e-04
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Frame = +3
Query: 198 DPCAGHDHSHAMVFHSCVCTEILFQGWKTTNALELFGSAVAIFLAGVLYEGLKYYREALH 377
D C H +S +M F +LF W + + S + + L VLYEG+K + L
Sbjct: 49 DVCL-HRNSFSMHFIFSDTAVLLFDFWSVHSPAGMALSVLVLLLLAVLYEGIKVGKAKLL 107
Query: 378 TRA-----SSASDSRVNITKSE-CGTNSPCAGTAVVKYSMLSGGHIIQTCLHFIQSTASY 539
+ +S S + T + G++S G ++ + H Q+ +H IQ Y
Sbjct: 108 NQVLVNLPTSISQQTIAETDGDSAGSDSFPVGRTHHRWYLC---HFGQSLIHVIQVVIGY 164
Query: 540 MLMLIFMTYNVWL 578
+ML M+YN W+
Sbjct: 165 FIMLAVMSYNTWI 177
>AL449305-5|CAI10966.1| 188|Homo sapiens solute carrier family 31
(copper transporters), member 1 protein.
Length = 188
Score = 44.4 bits (100), Expect = 4e-04
Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 EILFQGWKTTNALELFGSAVAIFLAGVLYEGLKYYREALHTRASSASDSRVNITKSECGT 437
E+LF G A E+ G+ VA+FL + YEGLK RE+L R S S R N
Sbjct: 55 ELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESL-LRKSQVS-IRYNSMPVPGPN 112
Query: 438 NSPCAGT-AVVKYSMLSGGHIIQTC 509
+ T V MLS H++QTC
Sbjct: 113 GTILMETHKTVGQQMLSFPHLLQTC 137
>U83461-1|AAB66307.1| 143|Homo sapiens putative copper uptake
protein protein.
Length = 143
Score = 43.2 bits (97), Expect = 0.001
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Frame = +3
Query: 261 ILFQGWKTTNALELFGSAVAIFLAGVLYEGLKYYREALHTRA-----SSASDSRVNITKS 425
+LF W + + S + + L VLYEG+K + L + +S S + T
Sbjct: 13 LLFDFWSVHSPAGMALSVLVLLLLAVLYEGIKVGKAKLLNQVLVNLPTSISQQTIAETDG 72
Query: 426 E-CGTNSPCAGTAVVKYSMLSGGHIIQTCLHFIQSTASYMLMLIFMTYNVWL 578
+ G++S G ++ + H Q+ +H IQ Y +ML M+YN W+
Sbjct: 73 DSAGSDSFPVGRTHHRWYLC---HFGQSLIHVIQVVIGYFIMLAVMSYNTWI 121
>CR407615-1|CAG28543.1| 143|Homo sapiens SLC31A2 protein.
Length = 143
Score = 43.2 bits (97), Expect = 0.001
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Frame = +3
Query: 261 ILFQGWKTTNALELFGSAVAIFLAGVLYEGLKYYREALHTRA-----SSASDSRVNITKS 425
+LF W + + S + + L VLYEG+K + L + +S S + T
Sbjct: 13 LLFDFWSVHSPAGMALSVLVLLLLAVLYEGIKVGKAKLLNQVLVNLPTSISQQTIAETDG 72
Query: 426 E-CGTNSPCAGTAVVKYSMLSGGHIIQTCLHFIQSTASYMLMLIFMTYNVWL 578
+ G++S G ++ + H Q+ +H IQ Y +ML M+YN W+
Sbjct: 73 DSAGSDSFPVGRTHHRWYLC---HFGQSLIHVIQVVIGYFIMLAVMSYNTWI 121
>BC026252-1|AAH26252.1| 143|Homo sapiens solute carrier family 31
(copper transporters), member 2 protein.
Length = 143
Score = 43.2 bits (97), Expect = 0.001
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Frame = +3
Query: 261 ILFQGWKTTNALELFGSAVAIFLAGVLYEGLKYYREALHTRA-----SSASDSRVNITKS 425
+LF W + + S + + L VLYEG+K + L + +S S + T
Sbjct: 13 LLFDFWSVHSPAGMALSVLVLLLLAVLYEGIKVGKAKLLNQVLVNLPTSISQQTIAETDG 72
Query: 426 E-CGTNSPCAGTAVVKYSMLSGGHIIQTCLHFIQSTASYMLMLIFMTYNVWL 578
+ G++S G ++ + H Q+ +H IQ Y +ML M+YN W+
Sbjct: 73 DSAGSDSFPVGRTHHRWYLC---HFGQSLIHVIQVVIGYFIMLAVMSYNTWI 121
>AL449105-3|CAO78192.1| 143|Homo sapiens solute carrier family 31
(copper transporters), member 2 protein.
Length = 143
Score = 43.2 bits (97), Expect = 0.001
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Frame = +3
Query: 261 ILFQGWKTTNALELFGSAVAIFLAGVLYEGLKYYREALHTRA-----SSASDSRVNITKS 425
+LF W + + S + + L VLYEG+K + L + +S S + T
Sbjct: 13 LLFDFWSVHSPAGMALSVLVLLLLAVLYEGIKVGKAKLLNQVLVNLPTSISQQTIAETDG 72
Query: 426 E-CGTNSPCAGTAVVKYSMLSGGHIIQTCLHFIQSTASYMLMLIFMTYNVWL 578
+ G++S G ++ + H Q+ +H IQ Y +ML M+YN W+
Sbjct: 73 DSAGSDSFPVGRTHHRWYLC---HFGQSLIHVIQVVIGYFIMLAVMSYNTWI 121
>BC061924-1|AAH61924.1| 134|Homo sapiens SLC31A1 protein protein.
Length = 134
Score = 41.9 bits (94), Expect = 0.002
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +3
Query: 258 EILFQGWKTTNALELFGSAVAIFLAGVLYEGLKYYREALHTRASSASDSRVNITKSECGT 437
E+LF G A E+ G+ VA+FL + YEGLK RE+L R S S R N
Sbjct: 47 ELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESL-LRKSQVS-IRYNSMPVPGPN 104
Query: 438 NSPCAGT-AVVKYSMLSGGHIIQTCL 512
+ T V MLS H++QT L
Sbjct: 105 GTILMETHKTVGQQMLSFPHLLQTVL 130
>BC131613-1|AAI31614.1| 292|Homo sapiens keratin associated protein
10-9 protein.
Length = 292
Score = 33.1 bits (72), Expect = 1.0
Identities = 23/84 (27%), Positives = 34/84 (40%)
Frame = +1
Query: 235 CSIPACAPKYCSKDGRLPTPWSCLVQQ*QSSSPGCCTKV*NTTEKRCTHGPHLPAIPGSI 414
C +P C C +SC Q S P CCT + ++ C +P
Sbjct: 140 CCVPVCCKPVCCAPTCSEDSYSCCQQS--SCQPACCTS--SPCQQSC-------CVPVCC 188
Query: 415 SPRANAEPIVRVPVLPLSNTLCCR 486
P +PI VPV +++LCC+
Sbjct: 189 KPVC-CKPICCVPVCSGASSLCCQ 211
>BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 33.1 bits (72), Expect = 1.0
Identities = 25/103 (24%), Positives = 39/103 (37%)
Frame = +1
Query: 235 CSIPACAPKYCSKDGRLPTPWSCLVQQ*QSSSPGCCTKV*NTTEKRCTHGPHLPAIPGSI 414
C +P C C K SC Q S P CCT + ++ C +P
Sbjct: 228 CCVPVCCKTVCCKPVCSEDSSSCCQQS--SCQPACCTS--SPCQQAC-------CVPVCC 276
Query: 415 SPRANAEPIVRVPVLPLSNTLCCRAAT*YRRASTSFSRPPRTC 543
P +P+ VP+ +++LCC+ ++ TS C
Sbjct: 277 KPVC-CKPVGSVPICSGASSLCCQQSSCQPACCTSSQSQQGCC 318
>BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 33.1 bits (72), Expect = 1.0
Identities = 25/103 (24%), Positives = 39/103 (37%)
Frame = +1
Query: 235 CSIPACAPKYCSKDGRLPTPWSCLVQQ*QSSSPGCCTKV*NTTEKRCTHGPHLPAIPGSI 414
C +P C C K SC Q S P CCT + ++ C +P
Sbjct: 228 CCVPVCCKTVCCKPVCSEDSSSCCQQS--SCQPACCTS--SPCQQAC-------CVPVCC 276
Query: 415 SPRANAEPIVRVPVLPLSNTLCCRAAT*YRRASTSFSRPPRTC 543
P +P+ VP+ +++LCC+ ++ TS C
Sbjct: 277 KPVC-CKPVGSVPICSGASSLCCQQSSCQPACCTSSQSQQGCC 318
>AB076356-1|BAD01543.1| 292|Homo sapiens keratin associated protein
protein.
Length = 292
Score = 33.1 bits (72), Expect = 1.0
Identities = 23/84 (27%), Positives = 34/84 (40%)
Frame = +1
Query: 235 CSIPACAPKYCSKDGRLPTPWSCLVQQ*QSSSPGCCTKV*NTTEKRCTHGPHLPAIPGSI 414
C +P C C +SC Q S P CCT + ++ C +P
Sbjct: 140 CCVPVCCKPVCCAPTCSEDSYSCCQQS--SCQPACCTS--SPCQQSC-------CVPVCC 188
Query: 415 SPRANAEPIVRVPVLPLSNTLCCR 486
P +PI VPV +++LCC+
Sbjct: 189 KPVC-CKPICCVPVCSGASSLCCQ 211
>AB076351-1|BAD01538.1| 401|Homo sapiens keratin associated protein
protein.
Length = 401
Score = 33.1 bits (72), Expect = 1.0
Identities = 25/103 (24%), Positives = 39/103 (37%)
Frame = +1
Query: 235 CSIPACAPKYCSKDGRLPTPWSCLVQQ*QSSSPGCCTKV*NTTEKRCTHGPHLPAIPGSI 414
C +P C C K SC Q S P CCT + ++ C +P
Sbjct: 228 CCVPVCCKTVCCKPVCSEDSSSCCQQS--SCQPACCTS--SPCQQAC-------CVPVCC 276
Query: 415 SPRANAEPIVRVPVLPLSNTLCCRAAT*YRRASTSFSRPPRTC 543
P +P+ VP+ +++LCC+ ++ TS C
Sbjct: 277 KPVC-CKPVGSVPICSGASSLCCQQSSCQPACCTSSQSQQGCC 318
>AF382388-1|AAK60270.1| 478|Homo sapiens vitronectin protein.
Length = 478
Score = 30.7 bits (66), Expect = 5.5
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Frame = -3
Query: 216 HVQRMGRRCFRGHVRGR---GRGASCGPWLNFNDSTKTNI---NYSEFERAFVLTA 67
H R G R RGH RGR R S WL+ S ++N+ NY ++ +++ A
Sbjct: 373 HRNRKGYRSQRGHSRGRNQNSRRPSRATWLSLFSSEESNLGANNYDDYRMDWLVPA 428
>X05006-1|CAA28659.1| 478|Homo sapiens protein ( Human S-protein
gene, complete cds. ).
Length = 478
Score = 30.3 bits (65), Expect = 7.3
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Frame = -3
Query: 216 HVQRMGRRCFRGHVRGR---GRGASCGPWLNFNDSTKTNI---NYSEFERAFVLTA 67
H R G R RGH RGR R S WL+ S ++N+ NY ++ +++ A
Sbjct: 373 HRNRKGYRSQRGHSRGRNQNSRRPSRAMWLSLFSSEESNLGANNYDDYRMDWLVPA 428
>X03168-1|CAA26933.1| 478|Homo sapiens protein ( Human mRNA for
S-protein. ).
Length = 478
Score = 30.3 bits (65), Expect = 7.3
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Frame = -3
Query: 216 HVQRMGRRCFRGHVRGR---GRGASCGPWLNFNDSTKTNI---NYSEFERAFVLTA 67
H R G R RGH RGR R S WL+ S ++N+ NY ++ +++ A
Sbjct: 373 HRNRKGYRSQRGHSRGRNQNSRRPSRAMWLSLFSSEESNLGANNYDDYRMDWLVPA 428
>BC120960-1|AAI20961.1| 282|Homo sapiens keratin associated protein
10-1 protein.
Length = 282
Score = 30.3 bits (65), Expect = 7.3
Identities = 23/87 (26%), Positives = 35/87 (40%)
Frame = +1
Query: 235 CSIPACAPKYCSKDGRLPTPWSCLVQQ*QSSSPGCCTKV*NTTEKRCTHGPHLPAIPGSI 414
C +P C C + SC Q S P CCT + ++ C +P
Sbjct: 141 CCVPVCCKPVCYVPTCSESSSSCCQQS--SCHPACCTS--SPCQQAC-------CVPVRC 189
Query: 415 SPRANAEPIVRVPVLPLSNTLCCRAAT 495
P +PI VPV ++T CC+ ++
Sbjct: 190 KPVC-CKPICCVPVCSGASTSCCQQSS 215
>BC120959-1|AAI20960.1| 282|Homo sapiens keratin associated protein
10-1 protein.
Length = 282
Score = 30.3 bits (65), Expect = 7.3
Identities = 23/87 (26%), Positives = 35/87 (40%)
Frame = +1
Query: 235 CSIPACAPKYCSKDGRLPTPWSCLVQQ*QSSSPGCCTKV*NTTEKRCTHGPHLPAIPGSI 414
C +P C C + SC Q S P CCT + ++ C +P
Sbjct: 141 CCVPVCCKPVCYVPTCSESSSSCCQQS--SCHPACCTS--SPCQQAC-------CVPVRC 189
Query: 415 SPRANAEPIVRVPVLPLSNTLCCRAAT 495
P +PI VPV ++T CC+ ++
Sbjct: 190 KPVC-CKPICCVPVCSGASTSCCQQSS 215
>BC005046-1|AAH05046.1| 478|Homo sapiens vitronectin protein.
Length = 478
Score = 30.3 bits (65), Expect = 7.3
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Frame = -3
Query: 216 HVQRMGRRCFRGHVRGR---GRGASCGPWLNFNDSTKTNI---NYSEFERAFVLTA 67
H R G R RGH RGR R S WL+ S ++N+ NY ++ +++ A
Sbjct: 373 HRNRKGYRSQRGHSRGRNQNSRRPSRAMWLSLFSSEESNLGANNYDDYRMDWLVPA 428
>AL139287-7|CAI23176.1| 514|Homo sapiens cleavage and
polyadenylation specific factor 3-like protein.
Length = 514
Score = 30.3 bits (65), Expect = 7.3
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = -3
Query: 219 GHVQRMGRRCFRGHVRGRGRGASCGPWLNFNDSTKTNINYSEFERAFVLTAAKY 58
G Q +GR C + G+ CG + FND + + VL AA +
Sbjct: 25 GAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDVDDELEIKAYYAGHVLGAAMF 78
>AK021939-1|BAB13943.1| 499|Homo sapiens protein ( Homo sapiens
cDNA FLJ11877 fis, clone HEMBA1007087, weakly similar to
CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR, 100 KD
SUBUNIT. ).
Length = 499
Score = 30.3 bits (65), Expect = 7.3
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = -3
Query: 219 GHVQRMGRRCFRGHVRGRGRGASCGPWLNFNDSTKTNINYSEFERAFVLTAAKY 58
G Q +GR C + G+ CG + FND + + VL AA +
Sbjct: 10 GAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDVDDELEIKAYYAGHVLGAAMF 63
>AB076347-1|BAD01534.1| 282|Homo sapiens keratin associated protein
protein.
Length = 282
Score = 30.3 bits (65), Expect = 7.3
Identities = 23/87 (26%), Positives = 35/87 (40%)
Frame = +1
Query: 235 CSIPACAPKYCSKDGRLPTPWSCLVQQ*QSSSPGCCTKV*NTTEKRCTHGPHLPAIPGSI 414
C +P C C + SC Q S P CCT + ++ C +P
Sbjct: 141 CCVPVCCKPVCYVPTCSESSSSCCQQS--SCHPACCTS--SPCQQAC-------CVPVRC 189
Query: 415 SPRANAEPIVRVPVLPLSNTLCCRAAT 495
P +PI VPV ++T CC+ ++
Sbjct: 190 KPVC-CKPICCVPVCSGASTSCCQQSS 215
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,917,192
Number of Sequences: 237096
Number of extensions: 2227002
Number of successful extensions: 11118
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 10583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11005
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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