Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12l06
(243 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29B12.14c |||purine transporter |Schizosaccharomyces pombe|c... 26 0.80
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 23 4.3
SPBC16C6.12c |||Las1-like protein|Schizosaccharomyces pombe|chr ... 23 4.3
SPAC13G7.07 |arb2||argonaute binding protein 2|Schizosaccharomyc... 23 4.3
SPBC1718.06 |msp1|mgm1|mitochondrial GTPase Msp1|Schizosaccharom... 23 5.6
SPAC644.08 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 23 5.6
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 23 7.5
SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog Taz1|Schizosacc... 23 7.5
SPAC3A12.05c |taf2||TATA-binding protein associated factor Taf2|... 23 7.5
SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr 1|||... 22 9.9
SPAC4H3.05 |srs2||ATP-dependent DNA helicase, UvrD subfamily|Sch... 22 9.9
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 22 9.9
SPBC18A7.02c |||seven transmembrane receptor-like protein|Schizo... 22 9.9
SPBC32H8.09 |||WD repeat protein, human WDR8 family|Schizosaccha... 22 9.9
SPBC16D10.09 |pcn1|pcn|PCNA |Schizosaccharomyces pombe|chr 2|||M... 22 9.9
SPCC970.04c |mob2||protein kinase activator Mob2|Schizosaccharom... 22 9.9
>SPAC29B12.14c |||purine transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 581
Score = 25.8 bits (54), Expect = 0.80
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 182 INHIHYLYIGIISSVESKLKLCQYFIVQHC 93
+N+I YL +GI++S S L +C+ F V C
Sbjct: 489 MNNIAYL-LGIVTSFLSHLIICKIFPVTAC 517
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 23.4 bits (48), Expect = 4.3
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 56 PPHSHRDRWDKDSSVVL*NIDII-SICFLLKK*FQYTNSEYGLYLFNNYFVPIDIK 220
P S+ + WD S+ N+D++ S F LK + L L N F ++ K
Sbjct: 303 PLWSNSETWDPHRSIRSFNLDLLNSSFFSLKNFLNFFGKRSSLSLANFRFHTVEPK 358
>SPBC16C6.12c |||Las1-like protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 23.4 bits (48), Expect = 4.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 74 DRWDKDSSVVL*NIDIISICFLLKK 148
D D D ++ N+DI+ CFL K+
Sbjct: 233 DEKDLDFAIETTNLDIVVSCFLEKR 257
>SPAC13G7.07 |arb2||argonaute binding protein 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 266
Score = 23.4 bits (48), Expect = 4.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 158 YTNSEYGLYLFNNY 199
+ SEYG YL N+Y
Sbjct: 212 FVGSEYGSYLLNSY 225
>SPBC1718.06 |msp1|mgm1|mitochondrial GTPase
Msp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 903
Score = 23.0 bits (47), Expect = 5.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 212 LLEQNNY*KGINHIHYLYIGIISSV 138
+L NNY +HY YIG+IS +
Sbjct: 451 ILHNNNY-----PLHYGYIGVISRI 470
>SPAC644.08 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 23.0 bits (47), Expect = 5.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 125 SICFLLKK*FQYTNSEYGLYLFNNY 199
SI F+ K F Y S Y Y+ NY
Sbjct: 15 SISFVKDKLFPYAASRYESYVNENY 39
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 22.6 bits (46), Expect = 7.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 186 RYKPYSLFVYWNHFFS 139
RY+P+ + YW F S
Sbjct: 703 RYEPWCNYTYWQTFVS 718
>SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog
Taz1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 22.6 bits (46), Expect = 7.5
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 2 SLKNISKASIISGDCEN 52
S+ +I KAS++ DC+N
Sbjct: 127 SIWDIEKASLLVNDCQN 143
>SPAC3A12.05c |taf2||TATA-binding protein associated factor
Taf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1174
Score = 22.6 bits (46), Expect = 7.5
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 116 DIISICFLLKK*FQYTNSEYGLYLFNNY 199
++ + C L K + EYG Y FN++
Sbjct: 316 EVENTCVFLYKAMDFFVREYGSYPFNSF 343
>SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 322
Score = 22.2 bits (45), Expect = 9.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 164 NSEYGLYLFNNYFVPID 214
NS YG FN Y PI+
Sbjct: 86 NSPYGTGYFNQYAEPIE 102
>SPAC4H3.05 |srs2||ATP-dependent DNA helicase, UvrD
subfamily|Schizosaccharomyces pombe|chr 1|||Manual
Length = 887
Score = 22.2 bits (45), Expect = 9.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 44 CENTPPHSHRDRWDKD 91
CEN PHS D D++
Sbjct: 609 CENIIPHSRSDDLDEE 624
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 22.2 bits (45), Expect = 9.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 60 GGVFSQSPLMMDAFEIFFKD 1
GGV +P+ + FEI + D
Sbjct: 1283 GGVLHDAPITCEKFEIHYVD 1302
>SPBC18A7.02c |||seven transmembrane receptor-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 22.2 bits (45), Expect = 9.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 94 AIFIPSITM*VWWCIFTVT 38
AI I SI + +W+C F +T
Sbjct: 301 AITIQSIHLGLWFCFFFLT 319
>SPBC32H8.09 |||WD repeat protein, human WDR8
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 89 DSSVVL*NIDIISICFLLKK*FQYTNSEYGLYLF 190
DS++ L SI F L QYTN++ ++++
Sbjct: 257 DSTLHLLETKTFSIVFRLHHCLQYTNTDLEMHIW 290
>SPBC16D10.09 |pcn1|pcn|PCNA |Schizosaccharomyces pombe|chr
2|||Manual
Length = 260
Score = 22.2 bits (45), Expect = 9.9
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 38 GDCEN--TPPHSHRDRWDKDSSVVL*NIDIISICFLLKK*FQYTNS 169
GD N T H D D+D S+ + +++ F LK Q+T +
Sbjct: 173 GDIGNGSTTLKQHTDLSDQDQSIEISLTQAVTLTFSLKYLAQFTKA 218
>SPCC970.04c |mob2||protein kinase activator
Mob2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 244
Score = 22.2 bits (45), Expect = 9.9
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 174 YSLFVYWNHFF 142
Y LF Y NHF+
Sbjct: 91 YELFTYLNHFY 101
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 870,385
Number of Sequences: 5004
Number of extensions: 13578
Number of successful extensions: 30
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 2,362,478
effective HSP length: 59
effective length of database: 2,067,242
effective search space used: 43412082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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