Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12l06
         (243 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39998-5|AAK71421.2|  408|Caenorhabditis elegans Gustatory recep...    27   2.3  
AC006714-20|AAK29723.2|  281|Caenorhabditis elegans Serpentine r...    27   2.3  
AC006714-16|AAK29721.3|  281|Caenorhabditis elegans Serpentine r...    27   2.3  
U80022-4|AAC25887.2|  469|Caenorhabditis elegans Expulsion defec...    25   9.4  
U80022-3|AAV28354.1|  490|Caenorhabditis elegans Expulsion defec...    25   9.4  
U80022-2|AAV28355.1|  510|Caenorhabditis elegans Expulsion defec...    25   9.4  
U80022-1|AAV28356.1|  501|Caenorhabditis elegans Expulsion defec...    25   9.4  
U41993-5|AAA83447.2|  451|Caenorhabditis elegans Hypothetical pr...    25   9.4  
AL023844-10|CAA19530.3|  503|Caenorhabditis elegans Hypothetical...    25   9.4  
AL023844-9|CAH04760.1|  512|Caenorhabditis elegans Hypothetical ...    25   9.4  

>U39998-5|AAK71421.2|  408|Caenorhabditis elegans Gustatory
          receptor family protein 5 protein.
          Length = 408

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +2

Query: 2  SLKNIS-KASIISGDCENTP 58
          SLKN+S K S+  GD ENTP
Sbjct: 15 SLKNVSSKISLSKGDYENTP 34


>AC006714-20|AAK29723.2|  281|Caenorhabditis elegans Serpentine
           receptor, class z protein9 protein.
          Length = 281

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = +2

Query: 113 IDIISICFLLKK*FQYTNSEYGLYLFNNYFVPIDIKLICC 232
           I I+ IC L +   Q+ +++   Y+   + + + +K+ CC
Sbjct: 167 IVILPICALFQILIQFVSAQRNKYILCQFILVVIMKITCC 206


>AC006714-16|AAK29721.3|  281|Caenorhabditis elegans Serpentine
           receptor, class z protein8 protein.
          Length = 281

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = +2

Query: 113 IDIISICFLLKK*FQYTNSEYGLYLFNNYFVPIDIKLICC 232
           I I+ IC L +   Q+ +++   Y+   + + + +K+ CC
Sbjct: 167 IVILPICALFQILIQFVSAQRNKYILCQFILVVIMKITCC 206


>U80022-4|AAC25887.2|  469|Caenorhabditis elegans Expulsion
           defective (defecation)protein 2, isoform a protein.
          Length = 469

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 79  SITM*VWWCIFTVTT 35
           SI    WWCI T+TT
Sbjct: 384 SIPAAYWWCIVTMTT 398


>U80022-3|AAV28354.1|  490|Caenorhabditis elegans Expulsion
           defective (defecation)protein 2, isoform b protein.
          Length = 490

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 79  SITM*VWWCIFTVTT 35
           SI    WWCI T+TT
Sbjct: 405 SIPAAYWWCIVTMTT 419


>U80022-2|AAV28355.1|  510|Caenorhabditis elegans Expulsion
           defective (defecation)protein 2, isoform c protein.
          Length = 510

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 79  SITM*VWWCIFTVTT 35
           SI    WWCI T+TT
Sbjct: 425 SIPAAYWWCIVTMTT 439


>U80022-1|AAV28356.1|  501|Caenorhabditis elegans Expulsion
           defective (defecation)protein 2, isoform d protein.
          Length = 501

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 79  SITM*VWWCIFTVTT 35
           SI    WWCI T+TT
Sbjct: 416 SIPAAYWWCIVTMTT 430


>U41993-5|AAA83447.2|  451|Caenorhabditis elegans Hypothetical
           protein F44A2.2 protein.
          Length = 451

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 79  SITM*VWWCIFTVTT 35
           SI    WWC+ T+TT
Sbjct: 350 SIPAACWWCVITMTT 364


>AL023844-10|CAA19530.3|  503|Caenorhabditis elegans Hypothetical
           protein Y48A6B.6a protein.
          Length = 503

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 79  SITM*VWWCIFTVTT 35
           SI    WWCI T+TT
Sbjct: 416 SIPAACWWCIVTMTT 430


>AL023844-9|CAH04760.1|  512|Caenorhabditis elegans Hypothetical
           protein Y48A6B.6b protein.
          Length = 512

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 79  SITM*VWWCIFTVTT 35
           SI    WWCI T+TT
Sbjct: 452 SIPAACWWCIVTMTT 466


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,674,589
Number of Sequences: 27780
Number of extensions: 71546
Number of successful extensions: 155
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 12,740,198
effective HSP length: 60
effective length of database: 11,073,398
effective search space used: 221467960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)