Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12l05
(679 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 43 4e-05
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 35 0.009
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.038
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 32 0.066
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 32 0.088
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 31 0.12
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 30 0.27
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 30 0.27
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 30 0.35
SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex su... 29 0.62
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.62
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 29 0.82
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 29 0.82
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 29 0.82
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 1.1
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 28 1.1
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 28 1.1
SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1 |... 28 1.1
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 28 1.4
SPBC16A3.08c |||nuclear telomere cap complex subunit |Schizosacc... 27 3.3
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 27 3.3
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 27 3.3
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 26 4.4
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 26 4.4
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 4.4
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 26 4.4
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 26 5.8
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 26 5.8
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 26 5.8
SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo... 25 7.6
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 25 7.6
SPBC725.08 |||transcription factor |Schizosaccharomyces pombe|ch... 25 7.6
SPCC285.08 |ret2||coatomer delta subunit Ret2 |Schizosaccharomyc... 25 7.6
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 25 7.6
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 43.2 bits (97), Expect = 4e-05
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +1
Query: 403 DRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEE-- 576
+++ A+ +A AE ++ K +EV +L L EQ+ E ++E ++ ++ ELEEE
Sbjct: 6 EKINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETK 65
Query: 577 -LRVVGNNLKSLEVSEEKATKREETYETHLKLLD 675
LR+ +N + E+ +++ E E L+ D
Sbjct: 66 QLRLKADNEDIQKTEAEQLSRKVELLEEELETND 99
Score = 34.7 bits (76), Expect = 0.012
Identities = 28/121 (23%), Positives = 58/121 (47%)
Frame = +1
Query: 313 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 492
A A+ EA A+ +E K +E + ++++ L + A+ EE +++ +++ +
Sbjct: 11 ARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETKQL--R 68
Query: 493 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLL 672
L +D+++ E AEQ K+ LEEEL L+ + + E +E ++ L
Sbjct: 69 LKADNEDIQKTE--AEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQSL 126
Query: 673 D 675
+
Sbjct: 127 E 127
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 35.1 bits (77), Expect = 0.009
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Frame = +1
Query: 325 LSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLM 504
+ + Q E+E RKA E + +E + A EA+ QAK AEE K+ E K
Sbjct: 533 IQQRIQEKAEAEAKRKA-EEKARLEAEENAKREAE-EQAKREAEEKAKREAEEKAKREAE 590
Query: 505 EQDLERAEERAE-QSDCKIVELEEELRVVGNNLKSLEVSEEKATKREE 645
E+ AEE A+ +++ K EE K+ +EEKA + E
Sbjct: 591 EKAKREAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAE 638
Score = 35.1 bits (77), Expect = 0.009
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +1
Query: 307 ATATAKLSEASQAADESE-RIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 483
A AK +A E+E + ++ E + E + A EA+ +AK AEE K+ E
Sbjct: 597 AEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAE-EKAKREAEEKAKREAEE 655
Query: 484 ARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHL 663
K E AEE+A++ + + E E +V ++ + E+ KRE +
Sbjct: 656 KAKREAEENAKREAEEKAKREAEENAKREAEEKVKRETEENAKRKAEEEGKREADKNPEI 715
Query: 664 K 666
K
Sbjct: 716 K 716
Score = 33.9 bits (74), Expect = 0.022
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +1
Query: 313 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 492
A ++SE +A+ + I+ A++ R + + A +A+ +A+L AEE+ K+ E K
Sbjct: 513 APPQISE-EEASQRKDAIKLAIQQRIQEKAEAEAKRKAE-EKARLEAEENAKREAEEQAK 570
Query: 493 LVLMEQDLERAEERAE-QSDCKIVELEEELRVVGNNLKSLEVSEEKATKREE 645
E+ AEE+A+ +++ K EE K+ +EEKA + E
Sbjct: 571 REAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREAE 622
Score = 33.9 bits (74), Expect = 0.022
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Frame = +1
Query: 307 ATATAKLSEASQAADESE-RIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 483
A A+L A E+E + ++ E + E + A EA+ +AK AEE+ K+ E
Sbjct: 549 AEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAE-EKAKREAEENAKREAEE 607
Query: 484 ARKLVLMEQDLERAEERAE-QSDCKIVELEEELRVVGNNLKSLEVSEEKATKREE 645
K E+ AEE+A+ +++ K EE K+ +EEKA + E
Sbjct: 608 KAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAE 662
Score = 31.9 bits (69), Expect = 0.088
Identities = 27/117 (23%), Positives = 50/117 (42%)
Frame = +1
Query: 328 SEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLME 507
+E + E+ ++ E + E + A EA+ +AK AEE+ K+ E K E
Sbjct: 637 AEEKAKREAEEKAKREAEEKAKREAEENAKREAE-EKAKREAEENAKREAEEKVKRETEE 695
Query: 508 QDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLDA 678
+AEE ++ K E++ + + + AT+ E +T ++ L A
Sbjct: 696 NAKRKAEEEGKREADKNPEIKSSAPLASSEANVDTSKQTNATEPEVVDKTKVEKLKA 752
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.038
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 532 VPPPSLGPAP*EQACAPPLRISCPTPRR*ASPVTVEP 422
+PPPS AP + APP+ S P P + A+PV P
Sbjct: 149 IPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 25.4 bits (53), Expect = 7.6
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Frame = -1
Query: 535 RVPPPSLGPAP*EQACAPPLRISCPTPRR*ASPVTVEPPRWQRDHP--PCWCGSPAPCVF 362
+VPPP L AP + P + P A VT E P++ P P P P
Sbjct: 200 KVPPPPLSQAPVANTSSRPSSFAPPAGH--APNVTSESPKFPNRGPSIPSASVPPVPPSS 257
Query: 361 ARIHRRP 341
+ +RP
Sbjct: 258 YVLQQRP 264
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 32.3 bits (70), Expect = 0.066
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Frame = +1
Query: 316 TAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQ--LSQAKLIAEESDKKYEEVAR 489
TA L E D E ++ L+N++ + AIL + L + K I ++ ++ + +
Sbjct: 261 TASLEEYLNDPDFEENRKQYLQNKSGSPVEETAILNRKPTLRKKKSIPKKQNESSSTI-Q 319
Query: 490 KLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREE--TYETHL 663
K ++Q+ +EE A +S + + +K E+ E+ + EE YE+
Sbjct: 320 KENTVQQEASSSEEEAVKSLPETQRTTSRIETQEEEIKEEEMEGEEEEEEEEVPNYESEN 379
Query: 664 KLLD 675
+L D
Sbjct: 380 ELED 383
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 31.9 bits (69), Expect = 0.088
Identities = 22/65 (33%), Positives = 28/65 (43%)
Frame = +3
Query: 90 DKHAARNDFRRFEEENASNERGNGKI*GRVRGVPQTVASGNYAKRRS*VRSGCPEPTYPT 269
D H++R R++E+E NGK R G P + SGN A S P YPT
Sbjct: 3 DSHSSR---RKYEKEKLVFATNNGK---RTEGTPAFLKSGNTASSSSPTLQFRPTSRYPT 56
Query: 270 AGGGP 284
P
Sbjct: 57 LSHEP 61
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 31.5 bits (68), Expect = 0.12
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Frame = +1
Query: 334 ASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEE-SDKKYE-EVARKLVLME 507
A+Q A E ER R A + + AI AQ Q ++ E+ + ++++ + +L +E
Sbjct: 362 AAQQAAEMERQRMAAQQHQQALE---AIQMAQAEQQRIAQEQLAQQQFQMQTQGQLAELE 418
Query: 508 QDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVS-EEKATKREETYET 657
Q L + EQS+ + + + +R + N L V+ +E+ + ++ E+
Sbjct: 419 QQLLATRGQLEQSNVLLNQYDARVRTLENELSQAGVNLQEQIHQNDDLIES 469
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 30.3 bits (65), Expect = 0.27
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = +1
Query: 451 AEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKA 630
+ ++ KKY+ + +K + +DLE+ + S LE +LR + LE S +
Sbjct: 1407 SSDTRKKYDSIIKKRDSLREDLEKFRSTGKNSSI----LEAQLREITKQKNMLEQSLDDM 1462
Query: 631 TKREETYETHLKLL 672
+R+ + +L +L
Sbjct: 1463 RERQRSTNRNLDVL 1476
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 30.3 bits (65), Expect = 0.27
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Frame = +1
Query: 319 AKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLV 498
++L E S+ D SE+ EN N +R+A LE+ LS +++ E+ +
Sbjct: 930 SRLFEISKQLDNSEQ-----EN--NKFRERIAELESHLSNYAEAKLAQERELEQTRVLIS 982
Query: 499 LMEQDLERAEERAEQSDCKIVELEEELRVVGN-NLKSLEVS 618
QD E +E E+ + ++ +EEE+R V + N + L V+
Sbjct: 983 DQSQDGE-LKELLEEKENALIMMEEEMRQVNDANTELLRVN 1022
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 29.9 bits (64), Expect = 0.35
Identities = 27/98 (27%), Positives = 51/98 (52%)
Frame = +1
Query: 319 AKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLV 498
A L++ Q ++ R K +++ N+ V L+ + S+ + ++ ++ +E+A+K +
Sbjct: 152 ATLADLEQFSNPITRPSKEVDSLENI----VTKLDLE-SEDLMRLKKQEQLDDEIAKKYL 206
Query: 499 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLE 612
L +Q+ AEE Q IV E+E N+KSLE
Sbjct: 207 LGQQE---AEEPLVQQQTSIVNPEKEEVTKTENIKSLE 241
>SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex subunit
Mtr4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1117
Score = 29.1 bits (62), Expect = 0.62
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +1
Query: 406 RVAILEAQLSQAKLIA-EESDKKYEEVARKLVLMEQ--DLERAEERAEQSDCKIVELEEE 576
+V ILE++L L E ++KY E RKL L+E+ DL++ +A +S ++ EL
Sbjct: 870 KVNILESRLLSNPLHNFSELEEKYAEYLRKLALLEEVKDLKKKLSKA-RSIMQLDELNSR 928
Query: 577 LRVV 588
RV+
Sbjct: 929 KRVL 932
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.1 bits (62), Expect = 0.62
Identities = 20/105 (19%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Frame = +1
Query: 319 AKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLS--QAKLIAEESDKKYEEVARK 492
+ ++E Q +R LE +T +R+ +E + Q+KLIA D +
Sbjct: 885 SNITELKQDITLQRTVRNQLEIQTTELKERLKFMEERQENLQSKLIAANKDTTQNPDNVE 944
Query: 493 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEK 627
+ + +LER +E+ ++ + ++++ L+ + + E+
Sbjct: 945 VEAISIELERTKEKLRMAELEKSNIQQKYLASEKTLEMMNETHEQ 989
Score = 25.8 bits (54), Expect = 5.8
Identities = 21/84 (25%), Positives = 38/84 (45%)
Frame = +1
Query: 406 RVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRV 585
R+ L +L K I+ +KK+EE L L + +++ Q E L
Sbjct: 671 RLEQLTNELESLKSISRNKEKKFEEAISSLQLEKSNIQL------QLTSLTSERSLALEK 724
Query: 586 VGNNLKSLEVSEEKATKREETYET 657
+ + KSL +SE + +E+Y++
Sbjct: 725 LNDLEKSLVLSERSKDELDESYKS 748
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 28.7 bits (61), Expect = 0.82
Identities = 27/114 (23%), Positives = 48/114 (42%)
Frame = +1
Query: 328 SEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLME 507
S+ + +E I EN E++ ++I + E +EE +L +
Sbjct: 517 SQLESLRNNTEWISSVAENGEKTEEELISIWLGDAKVELITPSEITDGFEE---ELQIDP 573
Query: 508 QDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKL 669
+ LE ++ AE S +EEELR NL+ + + T E+ +T L +
Sbjct: 574 EKLEEIQKEAEDSGAL---MEEELRGKFINLRCKYLFSKLTTLHEKEIDTLLTI 624
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 28.7 bits (61), Expect = 0.82
Identities = 29/150 (19%), Positives = 67/150 (44%), Gaps = 7/150 (4%)
Frame = +1
Query: 211 IMRREEA-ESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENR 387
IM+ + A E + + L+R+I+ + +K+SE E A+ +
Sbjct: 298 IMKSKVALELQSSQLSRQIEFSKKDESSKLNILSELESKISEKENELSEILPKYNAIVSE 357
Query: 388 TNMEDDRVAILEAQ----LSQAKLIAEESDKKYEE--VARKLVLMEQDLERAEERAEQSD 549
+ + R+ +L+ Q L + ++ + KK + + +L+ + +++ +E ++
Sbjct: 358 ADDLNKRIMLLKNQKQSLLDKQSRTSQFTTKKERDEWIRNQLLQINRNINSTKENSDYLK 417
Query: 550 CKIVELEEELRVVGNNLKSLEVSEEKATKR 639
+ E+E EL+ + K +E+S E R
Sbjct: 418 TEYDEMENELKAKLSRKKEIEISLESQGDR 447
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 28.7 bits (61), Expect = 0.82
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 499 EQACAPPLRISCPTPRR*ASPVTVEPPRWQRDH 401
++A APP+ I CP R+ TV R+QRDH
Sbjct: 1341 QRASAPPIDIYCPGSRQ----FTVLQSRFQRDH 1369
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 28.3 bits (60), Expect = 1.1
Identities = 24/96 (25%), Positives = 48/96 (50%)
Frame = +1
Query: 358 ERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERA 537
+++ + +E R + E +R + + A+ I E +D+K E++ + ++ + E
Sbjct: 457 QQMTREMEERVS-EVERTFLTKLLEESAQGI-EYTDQKLEKMGGWMKKLQDENSEKTETI 514
Query: 538 EQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREE 645
Q + I EL EELR +L+ + E AT++ E
Sbjct: 515 AQLEQIIEELHEELR----SLEEESIKESSATQQNE 546
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.3 bits (60), Expect = 1.1
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Frame = +1
Query: 328 SEASQAADESERIRKALENRTNMEDDRVAILEA---QLSQAKLIAEESDKK--YEEVARK 492
S+A ERI+K +EN + + D + + + + L ES K+ EV
Sbjct: 855 SQAEIVGANKERIQKTVENGSQLLDSKSKAIHSNSRSMYDHCLALAESQKQGVNLEVQTL 914
Query: 493 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLK 666
L+++ E +E+ ++ ++++L E L VGNN ++ + T+ ++ + LK
Sbjct: 915 DRLLQKVKEHSEDNTKEKHQQLLDLLESL--VGNNDNLIDSIKTPHTELQKITDHVLK 970
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 28.3 bits (60), Expect = 1.1
Identities = 23/86 (26%), Positives = 36/86 (41%)
Frame = +1
Query: 397 EDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEE 576
+D + L+ QL K +A E E V + + DL+ + A + D +
Sbjct: 841 KDALINNLQNQLESTKEVANELTITKERVLQ----LTNDLQEEQALAHEKDILVERANSR 896
Query: 577 LRVVGNNLKSLEVSEEKATKREETYE 654
+ VV L SL E + T +E YE
Sbjct: 897 VEVVHERLSSL---ENQVTIADEKYE 919
>SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 28.3 bits (60), Expect = 1.1
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +1
Query: 427 QLSQAKLIAEESDKKYEEVARKLVLMEQDLE---RAEERAEQSDCKIVELEEELRVVGNN 597
+LSQ E+ KKYE+ +KL+ E + E ++ +S+ LEEE
Sbjct: 250 RLSQDAQEEEKQKKKYEQHIKKLLDGESNEEGGGEFQDHGMRSEINEEVLEEEDEEKIAL 309
Query: 598 LKSLEVSEEKATKREET 648
LK LE + AT+ E T
Sbjct: 310 LKKLESKQPMATRFEIT 326
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 511 DLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHL-KLLD 675
DL + + ++ + V E+ R G N L ++ K+++ YE H+ KLLD
Sbjct: 219 DLSKPIIETDAAEIEEVSAEKARRQFGKNGIRLSQDAQEEEKQKKKYEQHIKKLLD 274
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 27.9 bits (59), Expect = 1.4
Identities = 19/104 (18%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Frame = +1
Query: 367 RKALENRTNMEDDRVAILEAQLSQAKLIAEE-SDKKYEEVARKLVLMEQDLERAEERAEQ 543
++ ++N N + + QL+ + + E+ A + +++++ E+ +
Sbjct: 415 KRDIQNSINAAKSCLDVYREQLNTERARENNLGGSQIEKRANESNNLQREIADLSEQIVE 474
Query: 544 SDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLD 675
+ K +L L +G NL SL ++ + HLK+L+
Sbjct: 475 LESKRNDLHSALLEMGGNLTSLLTKKDSIANKISDQSEHLKVLE 518
>SPBC16A3.08c |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 284
Score = 26.6 bits (56), Expect = 3.3
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 325 LSEASQAADESERIRKALENRTNME----DDRVAILEAQLSQAKLIAEESDKK 471
LSE AA R + LEN T +E ++ A L+ SQ K A+ES K
Sbjct: 181 LSERKSAAKPVGRTVEKLENATKVEKSAPEELFASLKKSASQKKSAAKESKPK 233
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 26.6 bits (56), Expect = 3.3
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +1
Query: 424 AQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVV-GNNL 600
A LS K E K Y+E K + D+E + + EQ + + LE L + N
Sbjct: 531 ANLSDVKAKVSEIRKAYDEELAKAKQISLDIETNKAQTEQVNREYSILEATLNALQKQNK 590
Query: 601 KSLEVSEEKATKRE 642
+ EV E+ + E
Sbjct: 591 QKGEVLEQVVAESE 604
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -1
Query: 202 ATVCGTPRTRPYIFPFPLSFDAFSSSKRLKSFLAACLS 89
A+V GTP RP F FP S K+ A +S
Sbjct: 771 ASVDGTPMVRPLFFEFPKQISLASVDKQFMIGTALLIS 808
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 26.2 bits (55), Expect = 4.4
Identities = 15/78 (19%), Positives = 41/78 (52%)
Frame = +1
Query: 409 VAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVV 588
+A E QL + + ++ ++ ++V+ + L + + E+ + +E K + EE + +
Sbjct: 202 LAAAEQQLQELSVHNQQLEESIKQVSSSIELEKINAEQRLQISELEKLKAAQ-EERIEKL 260
Query: 589 GNNLKSLEVSEEKATKRE 642
+N +++E+ +E+ E
Sbjct: 261 SSNNRNVEILKEEKNDLE 278
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 4.4
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +1
Query: 451 AEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKS 606
A+ +KK+ E R L+ E EQ IV +EE + V K+
Sbjct: 219 AKTWEKKFREALRDSKEYAAQLQTIHEEYEQQQAHIVRMEELIHAVEKERKT 270
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 26.2 bits (55), Expect = 4.4
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +1
Query: 358 ERIRKALENRTNMEDDRV--AILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEE 531
E+ K +N T + +R A +E + S A + + ++ +E AR+L E L+ +E
Sbjct: 839 EQRAKMAKNTTKRQLERAIQAQIEYEKSVAAKLEDARIQREKEKARRLAEEEALLKEKQE 898
Query: 532 RAEQSDCKIVELEEEL 579
R Q + +++EE+
Sbjct: 899 RERQLQEERQKMQEEV 914
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 457 ESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGN-NLKSLEVSEEKAT 633
+SD K A + V E DL+ AE + + + ++ + V+ N +S+E+A
Sbjct: 36 DSDPKAHRAALRSVTHETDLDEFLNTAELGEVEFIAEKQNVTVIQNPEQNPFLLSKEEAA 95
Query: 634 KREETYE 654
+ ++ E
Sbjct: 96 RSKQKQE 102
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 25.8 bits (54), Expect = 5.8
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Frame = +1
Query: 370 KALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEE---RAE 540
K+ E+ + + D V I + S ++L EES++ E K + +++ R
Sbjct: 198 KSTEHDSTL-DSGVVIDGREKSSSELHEEESEQAAEGDTAKNSGTDAQAPLSDDEWLRLH 256
Query: 541 QSDCKIVELEEELRVVGNNLKSLE 612
++ K + EEE+ VVG+ LKS +
Sbjct: 257 RTRIKEKQPEEEVSVVGDELKSFD 280
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 25.8 bits (54), Expect = 5.8
Identities = 14/68 (20%), Positives = 33/68 (48%)
Frame = +1
Query: 361 RIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAE 540
R+R+ E +T+ EDD + ++S + + + ++ L +E D+E E +
Sbjct: 130 RVREEQEEKTDNEDDN----DVEISTQESLENNGLAEKKDDTSSLATLEDDIEGQEFSFD 185
Query: 541 QSDCKIVE 564
D ++++
Sbjct: 186 DQDLQMLQ 193
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 25.8 bits (54), Expect = 5.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 474 RRGGAQACSYGAGPREGGGTRRTKR 548
+RGG GPR G G+R+ KR
Sbjct: 229 QRGGTLEAPRKGGPRSGVGSRKRKR 253
>SPAC4F10.09c |||ribosome biogenesis protein Noc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 25.4 bits (53), Expect = 7.6
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 397 EDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEE 576
ED+ L Q ++ EESD EE+ + + M D +E+ A+++D + + EE+
Sbjct: 723 EDEVWKALVDSKPQLEMDEEESDFDSEEMDKAMTDMGSD---SEQSADENDNESMASEEK 779
Query: 577 -LRVVGNNLKSLEVSEEKATKREETYETHLKLL 672
+ NL + SE++ + +E LL
Sbjct: 780 PMFSDEENLSEIAHSEDEFDDTVDFFEDENDLL 812
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 25.4 bits (53), Expect = 7.6
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -1
Query: 361 ARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVGSGQPLRTQLL 224
AR H RP R + R + + A G PP+ + SG R + L
Sbjct: 82 ARQHERPFRSRKSRRRKGKKAFSPRPGSPPSPSFYRSGSQKRARNL 127
>SPBC725.08 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 609
Score = 25.4 bits (53), Expect = 7.6
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 505 EQDLERAEERA-EQSDCKIVELEEELRVVGNNLKSLEVSEEKATKREETYETHLKLLDA 678
+QDL R+ +S C E+ V + + LEVSE + + R Y+ + LDA
Sbjct: 113 KQDLYARTARSFVESHCDEAWFEDSYWVDESQGRVLEVSENEKSYRRALYDKFMDRLDA 171
>SPCC285.08 |ret2||coatomer delta subunit Ret2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 240
Score = 25.4 bits (53), Expect = 7.6
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +1
Query: 430 LSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSL 609
L+Q K E + +EE +++V +++E EER + ++ +E R NL S
Sbjct: 127 LTQIKTYLEM--ESHEEKIQEIVSRNKEIEATEERKRRIKQLELQKKEAARRAAQNLPSA 184
Query: 610 EVSE 621
+ E
Sbjct: 185 DAYE 188
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 25.4 bits (53), Expect = 7.6
Identities = 20/94 (21%), Positives = 45/94 (47%)
Frame = +1
Query: 340 QAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLE 519
+A +++E+IR+ + N D+ E ++ + K +V V++E
Sbjct: 456 RARNDAEKIRQLEKASGNASDEGELNDEEEVISSSNTPSTKAKTTNKVIISDVIIEAT-- 513
Query: 520 RAEERAEQSDCKIVELEEELRVVGNNLKSLEVSE 621
+AE + Q + ++V EE+L + ++++SE
Sbjct: 514 QAEPKRRQKNSRVVFDEEDLTGDSHGSSNMKISE 547
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.127 0.325
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,190,609
Number of Sequences: 5004
Number of extensions: 41615
Number of successful extensions: 202
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 311890690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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