Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12l03
(611 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457300-1|CAG33581.1| 340|Homo sapiens SRR protein. 68 3e-11
BC074728-1|AAH74728.1| 340|Homo sapiens serine racemase protein. 68 3e-11
AY034081-1|AAK58495.1| 340|Homo sapiens serine racemase protein. 68 3e-11
AK223120-1|BAD96840.1| 340|Homo sapiens serine racemase variant... 68 3e-11
AK023169-1|BAB14442.1| 340|Homo sapiens protein ( Homo sapiens ... 68 3e-11
AF169974-1|AAG27081.1| 340|Homo sapiens serine racemase protein. 68 3e-11
BC091479-1|AAH91479.1| 329|Homo sapiens SDSL protein protein. 62 2e-09
BC009849-1|AAH09849.1| 329|Homo sapiens serine dehydratase-like... 62 2e-09
AF134473-1|AAP97250.1| 329|Homo sapiens serine dehydratase-2 pr... 62 2e-09
BC020750-1|AAH20750.1| 218|Homo sapiens SDS protein protein. 53 7e-07
J05037-1|AAA36604.1| 328|Homo sapiens protein ( Human serine de... 51 4e-06
AL834378-1|CAD39041.1| 288|Homo sapiens hypothetical protein pr... 50 9e-06
X88562-1|CAA61252.1| 551|Homo sapiens cystathionine beta-syntha... 39 0.016
X82166-1|CAA57656.1| 551|Homo sapiens cystathionine beta-syntha... 39 0.016
L19501-1|AAA19874.1| 551|Homo sapiens cystathionine beta-syntha... 39 0.016
L14577-1|AAA98524.1| 551|Homo sapiens cystathionine beta-syntha... 39 0.016
BT007154-1|AAP35818.1| 551|Homo sapiens cystathionine-beta-synt... 39 0.016
BC011381-1|AAH11381.1| 551|Homo sapiens CBS protein protein. 39 0.016
BC010242-1|AAH10242.1| 551|Homo sapiens CBS protein protein. 39 0.016
BC007257-1|AAH07257.1| 551|Homo sapiens CBS protein protein. 39 0.016
BC000440-1|AAH00440.1| 551|Homo sapiens CBS protein protein. 39 0.016
AL137314-1|CAB70691.1| 475|Homo sapiens hypothetical protein pr... 39 0.016
AF042836-2|AAC64683.1| 551|Homo sapiens cystathionine beta-synt... 39 0.016
AF042836-1|AAC64684.1| 565|Homo sapiens cystathionine beta-synt... 39 0.016
AY743708-1|AAW66463.1| 66|Homo sapiens serine racemase protein. 38 0.028
AY743707-1|AAW66462.1| 66|Homo sapiens serine racemase protein. 38 0.028
AY743706-1|AAW66461.1| 66|Homo sapiens serine racemase protein. 38 0.028
AY743705-1|AAW66460.1| 66|Homo sapiens serine racemase protein. 38 0.028
>CR457300-1|CAG33581.1| 340|Homo sapiens SRR protein.
Length = 340
Score = 67.7 bits (158), Expect = 3e-11
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Frame = +3
Query: 159 IKYDDILAASRRIVGAVVRTPC-TRAHMSERLGMDIYFKQEFLQYTGSFKERGVRNALIS 335
I + D+ A I ++ TP T + +++ G +++FK E Q TGSFK RG NA+ S
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRS 66
Query: 336 LSD---EQKKNGVIAASTGNHGAALSYHSTQLGIPCIVVVP 449
L E+K V+ S+GNHG AL+Y + GIP +VVP
Sbjct: 67 LVPDALERKPKAVVTHSSGNHGQALTYAAKLEGIPAYIVVP 107
>BC074728-1|AAH74728.1| 340|Homo sapiens serine racemase protein.
Length = 340
Score = 67.7 bits (158), Expect = 3e-11
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Frame = +3
Query: 159 IKYDDILAASRRIVGAVVRTPC-TRAHMSERLGMDIYFKQEFLQYTGSFKERGVRNALIS 335
I + D+ A I ++ TP T + +++ G +++FK E Q TGSFK RG NA+ S
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRS 66
Query: 336 LSD---EQKKNGVIAASTGNHGAALSYHSTQLGIPCIVVVP 449
L E+K V+ S+GNHG AL+Y + GIP +VVP
Sbjct: 67 LVPDALERKPKAVVTHSSGNHGQALTYAAKLEGIPAYIVVP 107
>AY034081-1|AAK58495.1| 340|Homo sapiens serine racemase protein.
Length = 340
Score = 67.7 bits (158), Expect = 3e-11
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Frame = +3
Query: 159 IKYDDILAASRRIVGAVVRTPC-TRAHMSERLGMDIYFKQEFLQYTGSFKERGVRNALIS 335
I + D+ A I ++ TP T + +++ G +++FK E Q TGSFK RG NA+ S
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRS 66
Query: 336 LSD---EQKKNGVIAASTGNHGAALSYHSTQLGIPCIVVVP 449
L E+K V+ S+GNHG AL+Y + GIP +VVP
Sbjct: 67 LVPDALERKPKAVVTHSSGNHGQALTYAAKLEGIPAYIVVP 107
>AK223120-1|BAD96840.1| 340|Homo sapiens serine racemase variant
protein.
Length = 340
Score = 67.7 bits (158), Expect = 3e-11
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Frame = +3
Query: 159 IKYDDILAASRRIVGAVVRTPC-TRAHMSERLGMDIYFKQEFLQYTGSFKERGVRNALIS 335
I + D+ A I ++ TP T + +++ G +++FK E Q TGSFK RG NA+ S
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRS 66
Query: 336 LSD---EQKKNGVIAASTGNHGAALSYHSTQLGIPCIVVVP 449
L E+K V+ S+GNHG AL+Y + GIP +VVP
Sbjct: 67 LVPDALERKPKAVVTHSSGNHGQALTYAAKLEGIPAYIVVP 107
>AK023169-1|BAB14442.1| 340|Homo sapiens protein ( Homo sapiens
cDNA FLJ13107 fis, clone NT2RP3002501, weakly similar to
THREONINE DEHYDRATASE CATABOLIC (EC 4.2.1.16). ).
Length = 340
Score = 67.7 bits (158), Expect = 3e-11
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Frame = +3
Query: 159 IKYDDILAASRRIVGAVVRTPC-TRAHMSERLGMDIYFKQEFLQYTGSFKERGVRNALIS 335
I + D+ A I ++ TP T + +++ G +++FK E Q TGSFK RG NA+ S
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRS 66
Query: 336 LSD---EQKKNGVIAASTGNHGAALSYHSTQLGIPCIVVVP 449
L E+K V+ S+GNHG AL+Y + GIP +VVP
Sbjct: 67 LVPDALERKPKAVVTHSSGNHGQALTYAAKLEGIPAYIVVP 107
>AF169974-1|AAG27081.1| 340|Homo sapiens serine racemase protein.
Length = 340
Score = 67.7 bits (158), Expect = 3e-11
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Frame = +3
Query: 159 IKYDDILAASRRIVGAVVRTPC-TRAHMSERLGMDIYFKQEFLQYTGSFKERGVRNALIS 335
I + D+ A I ++ TP T + +++ G +++FK E Q TGSFK RG NA+ S
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRS 66
Query: 336 LSD---EQKKNGVIAASTGNHGAALSYHSTQLGIPCIVVVP 449
L E+K V+ S+GNHG AL+Y + GIP +VVP
Sbjct: 67 LVPDALERKPKAVVTHSSGNHGQALTYAAKLEGIPAYIVVP 107
>BC091479-1|AAH91479.1| 329|Homo sapiens SDSL protein protein.
Length = 329
Score = 61.7 bits (143), Expect = 2e-09
Identities = 36/108 (33%), Positives = 61/108 (56%)
Frame = +3
Query: 237 MSERLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKNGVIAASTGNHGAALSYHST 416
+S+ GM ++ K E +Q +GSFK RG+ + ++ + ++ ++ +S GN G A +Y +
Sbjct: 26 LSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMAKKGCRH-LVCSSGGNAGIAAAYAAR 84
Query: 417 QLGIPCIVVVPIHTALNKVNKCEQLGAKVFKHGIDMSAAKLHAMSLGK 560
+LGIP +V+P T+L V + + GA+V G A L A L K
Sbjct: 85 KLGIPATIVLPESTSLQVVQRLQGEGAEVQLTGKVWDEANLRAQELAK 132
>BC009849-1|AAH09849.1| 329|Homo sapiens serine dehydratase-like
protein.
Length = 329
Score = 61.7 bits (143), Expect = 2e-09
Identities = 36/108 (33%), Positives = 61/108 (56%)
Frame = +3
Query: 237 MSERLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKNGVIAASTGNHGAALSYHST 416
+S+ GM ++ K E +Q +GSFK RG+ + ++ + ++ ++ +S GN G A +Y +
Sbjct: 26 LSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMAKKGCRH-LVCSSGGNAGIAAAYAAR 84
Query: 417 QLGIPCIVVVPIHTALNKVNKCEQLGAKVFKHGIDMSAAKLHAMSLGK 560
+LGIP +V+P T+L V + + GA+V G A L A L K
Sbjct: 85 KLGIPATIVLPESTSLQVVQRLQGEGAEVQLTGKVWDEANLRAQELAK 132
>AF134473-1|AAP97250.1| 329|Homo sapiens serine dehydratase-2
protein.
Length = 329
Score = 61.7 bits (143), Expect = 2e-09
Identities = 36/108 (33%), Positives = 61/108 (56%)
Frame = +3
Query: 237 MSERLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKNGVIAASTGNHGAALSYHST 416
+S+ GM ++ K E +Q +GSFK RG+ + ++ + ++ ++ +S GN G A +Y +
Sbjct: 26 LSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMAKKGCRH-LVCSSGGNAGIAAAYAAR 84
Query: 417 QLGIPCIVVVPIHTALNKVNKCEQLGAKVFKHGIDMSAAKLHAMSLGK 560
+LGIP +V+P T+L V + + GA+V G A L A L K
Sbjct: 85 KLGIPATIVLPESTSLQVVQRLQGEGAEVQLTGKVWDEANLRAQELAK 132
>BC020750-1|AAH20750.1| 218|Homo sapiens SDS protein protein.
Length = 218
Score = 53.2 bits (122), Expect = 7e-07
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
Frame = +3
Query: 210 VRTPCTRAH-MSERLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKNGVIAASTGN 386
V+TP + +S+ G +Y K + Q +GSFK RG+ + + +Q + +S GN
Sbjct: 9 VKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWA-KQGCAHFVCSSAGN 67
Query: 387 HGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFKHGIDMSAAKLHAMSLGKEK 566
G A +Y + QLG+P +VVP T + + + GA V G + A A +L K
Sbjct: 68 AGMAAAYAARQLGVPATIVVPSTTPALTIERLKNEGATVKVVGELLDEAFELAKALAKNN 127
Query: 567 K-MIYI 581
+YI
Sbjct: 128 PGWVYI 133
>J05037-1|AAA36604.1| 328|Homo sapiens protein ( Human serine
dehydratase mRNA, complete cds. ).
Length = 328
Score = 50.8 bits (116), Expect = 4e-06
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Frame = +3
Query: 210 VRTPCTRAH-MSERLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKNGVIAASTGN 386
V+TP + +S+ G +Y K + Q +GSFK RG+ + + +Q + +S GN
Sbjct: 9 VKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWA-KQGCAHFVCSSAGN 67
Query: 387 HGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGA 497
G A +Y + QLG+P +VVP T + + + GA
Sbjct: 68 AGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGA 104
>AL834378-1|CAD39041.1| 288|Homo sapiens hypothetical protein
protein.
Length = 288
Score = 49.6 bits (113), Expect = 9e-06
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +3
Query: 294 GSFKERGVRNALISLSD---EQKKNGVIAASTGNHGAALSYHSTQLGIPCIVVVP 449
GSFK RG NA+ SL E+K V+ S+GNHG AL+Y + GIP +VVP
Sbjct: 1 GSFKIRGALNAVRSLVPDALERKPKAVVTHSSGNHGQALTYAAKLEGIPAYIVVP 55
>X88562-1|CAA61252.1| 551|Homo sapiens cystathionine beta-synthase
protein.
Length = 551
Score = 38.7 bits (86), Expect = 0.016
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 216 TPCTRAH-MSERLGM--DIYFKQEFLQYTGSFKER-GVRNALISLSDEQKKNG--VIAAS 377
TP R + + ++ G+ ++ K EF GS K+R +R + D K G +I +
Sbjct: 87 TPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPT 146
Query: 378 TGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 509
+GN G L+ + G CI+V+P + KV+ LGA++ +
Sbjct: 147 SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR 190
>X82166-1|CAA57656.1| 551|Homo sapiens cystathionine beta-synthase
protein.
Length = 551
Score = 38.7 bits (86), Expect = 0.016
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 216 TPCTRAH-MSERLGM--DIYFKQEFLQYTGSFKER-GVRNALISLSDEQKKNG--VIAAS 377
TP R + + ++ G+ ++ K EF GS K+R +R + D K G +I +
Sbjct: 87 TPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPT 146
Query: 378 TGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 509
+GN G L+ + G CI+V+P + KV+ LGA++ +
Sbjct: 147 SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR 190
>L19501-1|AAA19874.1| 551|Homo sapiens cystathionine beta-synthase
protein.
Length = 551
Score = 38.7 bits (86), Expect = 0.016
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 216 TPCTRAH-MSERLGM--DIYFKQEFLQYTGSFKER-GVRNALISLSDEQKKNG--VIAAS 377
TP R + + ++ G+ ++ K EF GS K+R +R + D K G +I +
Sbjct: 87 TPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPT 146
Query: 378 TGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 509
+GN G L+ + G CI+V+P + KV+ LGA++ +
Sbjct: 147 SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR 190
>L14577-1|AAA98524.1| 551|Homo sapiens cystathionine beta-synthase
protein.
Length = 551
Score = 38.7 bits (86), Expect = 0.016
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 216 TPCTRAH-MSERLGM--DIYFKQEFLQYTGSFKER-GVRNALISLSDEQKKNG--VIAAS 377
TP R + + ++ G+ ++ K EF GS K+R +R + D K G +I +
Sbjct: 87 TPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPT 146
Query: 378 TGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 509
+GN G L+ + G CI+V+P + KV+ LGA++ +
Sbjct: 147 SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR 190
>BT007154-1|AAP35818.1| 551|Homo sapiens
cystathionine-beta-synthase protein.
Length = 551
Score = 38.7 bits (86), Expect = 0.016
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 216 TPCTRAH-MSERLGM--DIYFKQEFLQYTGSFKER-GVRNALISLSDEQKKNG--VIAAS 377
TP R + + ++ G+ ++ K EF GS K+R +R + D K G +I +
Sbjct: 87 TPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPT 146
Query: 378 TGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 509
+GN G L+ + G CI+V+P + KV+ LGA++ +
Sbjct: 147 SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR 190
>BC011381-1|AAH11381.1| 551|Homo sapiens CBS protein protein.
Length = 551
Score = 38.7 bits (86), Expect = 0.016
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 216 TPCTRAH-MSERLGM--DIYFKQEFLQYTGSFKER-GVRNALISLSDEQKKNG--VIAAS 377
TP R + + ++ G+ ++ K EF GS K+R +R + D K G +I +
Sbjct: 87 TPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPT 146
Query: 378 TGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 509
+GN G L+ + G CI+V+P + KV+ LGA++ +
Sbjct: 147 SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR 190
>BC010242-1|AAH10242.1| 551|Homo sapiens CBS protein protein.
Length = 551
Score = 38.7 bits (86), Expect = 0.016
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 216 TPCTRAH-MSERLGM--DIYFKQEFLQYTGSFKER-GVRNALISLSDEQKKNG--VIAAS 377
TP R + + ++ G+ ++ K EF GS K+R +R + D K G +I +
Sbjct: 87 TPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPT 146
Query: 378 TGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 509
+GN G L+ + G CI+V+P + KV+ LGA++ +
Sbjct: 147 SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR 190
>BC007257-1|AAH07257.1| 551|Homo sapiens CBS protein protein.
Length = 551
Score = 38.7 bits (86), Expect = 0.016
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 216 TPCTRAH-MSERLGM--DIYFKQEFLQYTGSFKER-GVRNALISLSDEQKKNG--VIAAS 377
TP R + + ++ G+ ++ K EF GS K+R +R + D K G +I +
Sbjct: 87 TPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPT 146
Query: 378 TGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 509
+GN G L+ + G CI+V+P + KV+ LGA++ +
Sbjct: 147 SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR 190
>BC000440-1|AAH00440.1| 551|Homo sapiens CBS protein protein.
Length = 551
Score = 38.7 bits (86), Expect = 0.016
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 216 TPCTRAH-MSERLGM--DIYFKQEFLQYTGSFKER-GVRNALISLSDEQKKNG--VIAAS 377
TP R + + ++ G+ ++ K EF GS K+R +R + D K G +I +
Sbjct: 87 TPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPT 146
Query: 378 TGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 509
+GN G L+ + G CI+V+P + KV+ LGA++ +
Sbjct: 147 SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR 190
>AL137314-1|CAB70691.1| 475|Homo sapiens hypothetical protein
protein.
Length = 475
Score = 38.7 bits (86), Expect = 0.016
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 216 TPCTRAH-MSERLGM--DIYFKQEFLQYTGSFKER-GVRNALISLSDEQKKNG--VIAAS 377
TP R + + ++ G+ ++ K EF GS K+R +R + D K G +I +
Sbjct: 11 TPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPT 70
Query: 378 TGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 509
+GN G L+ + G CI+V+P + KV+ LGA++ +
Sbjct: 71 SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR 114
>AF042836-2|AAC64683.1| 551|Homo sapiens cystathionine
beta-synthase major isoform protein.
Length = 551
Score = 38.7 bits (86), Expect = 0.016
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 216 TPCTRAH-MSERLGM--DIYFKQEFLQYTGSFKER-GVRNALISLSDEQKKNG--VIAAS 377
TP R + + ++ G+ ++ K EF GS K+R +R + D K G +I +
Sbjct: 87 TPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPT 146
Query: 378 TGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 509
+GN G L+ + G CI+V+P + KV+ LGA++ +
Sbjct: 147 SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR 190
>AF042836-1|AAC64684.1| 565|Homo sapiens cystathionine
beta-synthase minor isoform protein.
Length = 565
Score = 38.7 bits (86), Expect = 0.016
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 216 TPCTRAH-MSERLGM--DIYFKQEFLQYTGSFKER-GVRNALISLSDEQKKNG--VIAAS 377
TP R + + ++ G+ ++ K EF GS K+R +R + D K G +I +
Sbjct: 87 TPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPT 146
Query: 378 TGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 509
+GN G L+ + G CI+V+P + KV+ LGA++ +
Sbjct: 147 SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR 190
>AY743708-1|AAW66463.1| 66|Homo sapiens serine racemase protein.
Length = 66
Score = 37.9 bits (84), Expect = 0.028
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 159 IKYDDILAASRRIVGAVVRTPC-TRAHMSERLGMDIYFKQEFLQYTGSFKERGVRNALIS 335
I + D+ A I ++ TP T + +++ G +++FK E Q TGSFK RG NA+ S
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRS 66
>AY743707-1|AAW66462.1| 66|Homo sapiens serine racemase protein.
Length = 66
Score = 37.9 bits (84), Expect = 0.028
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 159 IKYDDILAASRRIVGAVVRTPC-TRAHMSERLGMDIYFKQEFLQYTGSFKERGVRNALIS 335
I + D+ A I ++ TP T + +++ G +++FK E Q TGSFK RG NA+ S
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRS 66
>AY743706-1|AAW66461.1| 66|Homo sapiens serine racemase protein.
Length = 66
Score = 37.9 bits (84), Expect = 0.028
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 159 IKYDDILAASRRIVGAVVRTPC-TRAHMSERLGMDIYFKQEFLQYTGSFKERGVRNALIS 335
I + D+ A I ++ TP T + +++ G +++FK E Q TGSFK RG NA+ S
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRS 66
>AY743705-1|AAW66460.1| 66|Homo sapiens serine racemase protein.
Length = 66
Score = 37.9 bits (84), Expect = 0.028
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 159 IKYDDILAASRRIVGAVVRTPC-TRAHMSERLGMDIYFKQEFLQYTGSFKERGVRNALIS 335
I + D+ A I ++ TP T + +++ G +++FK E Q TGSFK RG NA+ S
Sbjct: 7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRS 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,307,240
Number of Sequences: 237096
Number of extensions: 1751090
Number of successful extensions: 7023
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 6911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7012
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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