Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12k23
(649 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U44772-1|AAB06236.1| 306|Homo sapiens palmitoyl protein thioest... 150 5e-36
L42809-1|AAA85337.1| 306|Homo sapiens palmitoyl-protein thioest... 150 5e-36
CR542053-1|CAG46850.1| 306|Homo sapiens PPT1 protein. 150 5e-36
BC008426-1|AAH08426.1| 306|Homo sapiens palmitoyl-protein thioe... 150 5e-36
AL512599-16|CAI11026.1| 279|Homo sapiens palmitoyl-protein thio... 150 5e-36
AL512599-15|CAI11025.1| 306|Homo sapiens palmitoyl-protein thio... 150 5e-36
AF022211-1|AAB72224.1| 306|Homo sapiens palmitoyl-protein thioe... 150 5e-36
AL512599-14|CAI11024.1| 177|Homo sapiens palmitoyl-protein thio... 83 6e-16
AK223413-1|BAD97133.1| 534|Homo sapiens polymerase (RNA) III (D... 30 8.2
>U44772-1|AAB06236.1| 306|Homo sapiens palmitoyl protein
thioesterase protein.
Length = 306
Score = 150 bits (363), Expect = 5e-36
Identities = 67/126 (53%), Positives = 88/126 (69%)
Frame = +3
Query: 150 LGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVCEKLAADPKLSNGFN 329
+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N QV VC+ LA DPKL G+N
Sbjct: 51 MGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALAKDPKLQQGYN 110
Query: 330 VMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHETCDDVRKLLN 509
MGFSQG QF+RAV QRC P + N++S+GGQHQG++G+P C CD +RK LN
Sbjct: 111 AMGFSQGGQFLRAVAQRC--PSPPMINLISVGGQHQGVFGLPRCPGESSHICDFIRKTLN 168
Query: 510 YAAYNR 527
AY++
Sbjct: 169 AGAYSK 174
>L42809-1|AAA85337.1| 306|Homo sapiens palmitoyl-protein
thioesterase protein.
Length = 306
Score = 150 bits (363), Expect = 5e-36
Identities = 67/126 (53%), Positives = 88/126 (69%)
Frame = +3
Query: 150 LGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVCEKLAADPKLSNGFN 329
+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N QV VC+ LA DPKL G+N
Sbjct: 51 MGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALAKDPKLQQGYN 110
Query: 330 VMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHETCDDVRKLLN 509
MGFSQG QF+RAV QRC P + N++S+GGQHQG++G+P C CD +RK LN
Sbjct: 111 AMGFSQGGQFLRAVAQRC--PSPPMINLISVGGQHQGVFGLPRCPGESSHICDFIRKTLN 168
Query: 510 YAAYNR 527
AY++
Sbjct: 169 AGAYSK 174
>CR542053-1|CAG46850.1| 306|Homo sapiens PPT1 protein.
Length = 306
Score = 150 bits (363), Expect = 5e-36
Identities = 67/126 (53%), Positives = 88/126 (69%)
Frame = +3
Query: 150 LGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVCEKLAADPKLSNGFN 329
+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N QV VC+ LA DPKL G+N
Sbjct: 51 MGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALAKDPKLQQGYN 110
Query: 330 VMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHETCDDVRKLLN 509
MGFSQG QF+RAV QRC P + N++S+GGQHQG++G+P C CD +RK LN
Sbjct: 111 AMGFSQGGQFLRAVAQRC--PSPPMINLISVGGQHQGVFGLPRCPGESSHICDFIRKTLN 168
Query: 510 YAAYNR 527
AY++
Sbjct: 169 AGAYSK 174
>BC008426-1|AAH08426.1| 306|Homo sapiens palmitoyl-protein
thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
infantile) protein.
Length = 306
Score = 150 bits (363), Expect = 5e-36
Identities = 67/126 (53%), Positives = 88/126 (69%)
Frame = +3
Query: 150 LGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVCEKLAADPKLSNGFN 329
+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N QV VC+ LA DPKL G+N
Sbjct: 51 MGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALAKDPKLQQGYN 110
Query: 330 VMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHETCDDVRKLLN 509
MGFSQG QF+RAV QRC P + N++S+GGQHQG++G+P C CD +RK LN
Sbjct: 111 AMGFSQGGQFLRAVAQRC--PSPPMINLISVGGQHQGVFGLPRCPGESSHICDFIRKTLN 168
Query: 510 YAAYNR 527
AY++
Sbjct: 169 AGAYSK 174
>AL512599-16|CAI11026.1| 279|Homo sapiens palmitoyl-protein
thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
infantile) protein.
Length = 279
Score = 150 bits (363), Expect = 5e-36
Identities = 67/126 (53%), Positives = 88/126 (69%)
Frame = +3
Query: 150 LGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVCEKLAADPKLSNGFN 329
+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N QV VC+ LA DPKL G+N
Sbjct: 80 MGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALAKDPKLQQGYN 139
Query: 330 VMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHETCDDVRKLLN 509
MGFSQG QF+RAV QRC P + N++S+GGQHQG++G+P C CD +RK LN
Sbjct: 140 AMGFSQGGQFLRAVAQRC--PSPPMINLISVGGQHQGVFGLPRCPGESSHICDFIRKTLN 197
Query: 510 YAAYNR 527
AY++
Sbjct: 198 AGAYSK 203
>AL512599-15|CAI11025.1| 306|Homo sapiens palmitoyl-protein
thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
infantile) protein.
Length = 306
Score = 150 bits (363), Expect = 5e-36
Identities = 67/126 (53%), Positives = 88/126 (69%)
Frame = +3
Query: 150 LGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVCEKLAADPKLSNGFN 329
+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N QV VC+ LA DPKL G+N
Sbjct: 51 MGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALAKDPKLQQGYN 110
Query: 330 VMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHETCDDVRKLLN 509
MGFSQG QF+RAV QRC P + N++S+GGQHQG++G+P C CD +RK LN
Sbjct: 111 AMGFSQGGQFLRAVAQRC--PSPPMINLISVGGQHQGVFGLPRCPGESSHICDFIRKTLN 168
Query: 510 YAAYNR 527
AY++
Sbjct: 169 AGAYSK 174
>AF022211-1|AAB72224.1| 306|Homo sapiens palmitoyl-protein
thioesterase protein.
Length = 306
Score = 150 bits (363), Expect = 5e-36
Identities = 67/126 (53%), Positives = 88/126 (69%)
Frame = +3
Query: 150 LGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVCEKLAADPKLSNGFN 329
+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N QV VC+ LA DPKL G+N
Sbjct: 51 MGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALAKDPKLQQGYN 110
Query: 330 VMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHETCDDVRKLLN 509
MGFSQG QF+RAV QRC P + N++S+GGQHQG++G+P C CD +RK LN
Sbjct: 111 AMGFSQGGQFLRAVAQRC--PSPPMINLISVGGQHQGVFGLPRCPGESSHICDFIRKTLN 168
Query: 510 YAAYNR 527
AY++
Sbjct: 169 AGAYSK 174
>AL512599-14|CAI11024.1| 177|Homo sapiens palmitoyl-protein
thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
infantile) protein.
Length = 177
Score = 83.4 bits (197), Expect = 6e-16
Identities = 36/69 (52%), Positives = 48/69 (69%)
Frame = +3
Query: 321 GFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHETCDDVRK 500
G+N MGFSQG QF+RAV QRC P + N++S+GGQHQG++G+P C CD +RK
Sbjct: 3 GYNAMGFSQGGQFLRAVAQRCPS--PPMINLISVGGQHQGVFGLPRCPGESSHICDFIRK 60
Query: 501 LLNYAAYNR 527
LN AY++
Sbjct: 61 TLNAGAYSK 69
>AK223413-1|BAD97133.1| 534|Homo sapiens polymerase (RNA) III (DNA
directed) polypeptide C (62kD) variant protein.
Length = 534
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 348 GCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGI-YGIPHCGALRHET-CDDVRKLLNYAAY 521
G Q +R + G L Q+K + + QH + Y + G + +E C V ++L Y Y
Sbjct: 32 GSQPLRVIAHDTGTSLDQVKKALCVLAQHNLVSYQVHKRGVVEYEAQCSRVLRMLRYPRY 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,630,607
Number of Sequences: 237096
Number of extensions: 1967144
Number of successful extensions: 3096
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3087
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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