SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12k12
         (538 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X84709-1|CAA59197.1|  208|Homo sapiens mediator of receptor indu...    37   0.052
U74301-1|AAB58483.1|  149|Homo sapiens FADD protein protein.           37   0.052
U24231-1|AAA86517.1|  208|Homo sapiens FADD protein.                   37   0.052
DQ449938-1|ABD96828.1|  208|Homo sapiens Fas (TNFRSF6)-associate...    37   0.052
CR456738-1|CAG33019.1|  208|Homo sapiens FADD protein.                 37   0.052
BT006927-1|AAP35573.1|  208|Homo sapiens Fas (TNFRSF6)-associate...    37   0.052
BC000334-1|AAH00334.1|  208|Homo sapiens Fas (TNFRSF6)-associate...    37   0.052
AY423721-1|AAS00484.1|  208|Homo sapiens growth-inhibiting gene ...    37   0.052

>X84709-1|CAA59197.1|  208|Homo sapiens mediator of receptor induced
           toxicity protein.
          Length = 208

 Score = 36.7 bits (81), Expect = 0.052
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 83  FETIIEETGTNWRALARKLKIRECVIIKI-DAEETTLADKVKKILEIYEQRADPQRWFFV 259
           F  I +  G +WR LAR+LK+ +  I  I D     L ++V++ L I++           
Sbjct: 101 FNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAH 160

Query: 260 LCDALEESYRRDIADSLRNI 319
           L  AL       +AD ++ +
Sbjct: 161 LVGALRSCQMNLVADLVQEV 180


>U74301-1|AAB58483.1|  149|Homo sapiens FADD protein protein.
          Length = 149

 Score = 36.7 bits (81), Expect = 0.052
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 83  FETIIEETGTNWRALARKLKIRECVIIKI-DAEETTLADKVKKILEIYEQRADPQRWFFV 259
           F  I +  G +WR LAR+LK+ +  I  I D     L ++V++ L I++           
Sbjct: 42  FNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAH 101

Query: 260 LCDALEESYRRDIADSLRNI 319
           L  AL       +AD ++ +
Sbjct: 102 LVGALRSCQMNLVADLVQEV 121


>U24231-1|AAA86517.1|  208|Homo sapiens FADD protein.
          Length = 208

 Score = 36.7 bits (81), Expect = 0.052
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 83  FETIIEETGTNWRALARKLKIRECVIIKI-DAEETTLADKVKKILEIYEQRADPQRWFFV 259
           F  I +  G +WR LAR+LK+ +  I  I D     L ++V++ L I++           
Sbjct: 101 FNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAH 160

Query: 260 LCDALEESYRRDIADSLRNI 319
           L  AL       +AD ++ +
Sbjct: 161 LVGALRSCQMNLVADLVQEV 180


>DQ449938-1|ABD96828.1|  208|Homo sapiens Fas (TNFRSF6)-associated
           via death domain protein.
          Length = 208

 Score = 36.7 bits (81), Expect = 0.052
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 83  FETIIEETGTNWRALARKLKIRECVIIKI-DAEETTLADKVKKILEIYEQRADPQRWFFV 259
           F  I +  G +WR LAR+LK+ +  I  I D     L ++V++ L I++           
Sbjct: 101 FNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAH 160

Query: 260 LCDALEESYRRDIADSLRNI 319
           L  AL       +AD ++ +
Sbjct: 161 LVGALRSCQMNLVADLVQEV 180


>CR456738-1|CAG33019.1|  208|Homo sapiens FADD protein.
          Length = 208

 Score = 36.7 bits (81), Expect = 0.052
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 83  FETIIEETGTNWRALARKLKIRECVIIKI-DAEETTLADKVKKILEIYEQRADPQRWFFV 259
           F  I +  G +WR LAR+LK+ +  I  I D     L ++V++ L I++           
Sbjct: 101 FNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAH 160

Query: 260 LCDALEESYRRDIADSLRNI 319
           L  AL       +AD ++ +
Sbjct: 161 LVGALRSCQMNLVADLVQEV 180


>BT006927-1|AAP35573.1|  208|Homo sapiens Fas (TNFRSF6)-associated
           via death domain protein.
          Length = 208

 Score = 36.7 bits (81), Expect = 0.052
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 83  FETIIEETGTNWRALARKLKIRECVIIKI-DAEETTLADKVKKILEIYEQRADPQRWFFV 259
           F  I +  G +WR LAR+LK+ +  I  I D     L ++V++ L I++           
Sbjct: 101 FNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAH 160

Query: 260 LCDALEESYRRDIADSLRNI 319
           L  AL       +AD ++ +
Sbjct: 161 LVGALRSCQMNLVADLVQEV 180


>BC000334-1|AAH00334.1|  208|Homo sapiens Fas (TNFRSF6)-associated
           via death domain protein.
          Length = 208

 Score = 36.7 bits (81), Expect = 0.052
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 83  FETIIEETGTNWRALARKLKIRECVIIKI-DAEETTLADKVKKILEIYEQRADPQRWFFV 259
           F  I +  G +WR LAR+LK+ +  I  I D     L ++V++ L I++           
Sbjct: 101 FNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAH 160

Query: 260 LCDALEESYRRDIADSLRNI 319
           L  AL       +AD ++ +
Sbjct: 161 LVGALRSCQMNLVADLVQEV 180


>AY423721-1|AAS00484.1|  208|Homo sapiens growth-inhibiting gene 3
           protein protein.
          Length = 208

 Score = 36.7 bits (81), Expect = 0.052
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 83  FETIIEETGTNWRALARKLKIRECVIIKI-DAEETTLADKVKKILEIYEQRADPQRWFFV 259
           F  I +  G +WR LAR+LK+ +  I  I D     L ++V++ L I++           
Sbjct: 101 FNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAH 160

Query: 260 LCDALEESYRRDIADSLRNI 319
           L  AL       +AD ++ +
Sbjct: 161 LVGALRSCQMNLVADLVQEV 180


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,694,943
Number of Sequences: 237096
Number of extensions: 900035
Number of successful extensions: 1831
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1831
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -