Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12k08
         (704 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061576-1|AAL29124.1|  987|Drosophila melanogaster SD02803p pro...    30   3.5  
AE014296-1090|AAF50681.2|  991|Drosophila melanogaster CG10289-P...    30   3.5  
AY060948-1|AAL28496.1|  784|Drosophila melanogaster GM08606p pro...    29   8.1  
AE013599-3826|AAF47171.1|  784|Drosophila melanogaster CG4065-PA...    29   8.1  
AE013599-3825|AAX52681.1|  783|Drosophila melanogaster CG4065-PB...    29   8.1  

>AY061576-1|AAL29124.1|  987|Drosophila melanogaster SD02803p
           protein.
          Length = 987

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
 Frame = -3

Query: 591 VSNSERYGG--SSALADNDEIPMWQSVI 514
           +S SE  G   +S+L+D DE+ +WQS+I
Sbjct: 623 ISESEHIGDLITSSLSDEDEVKLWQSLI 650


>AE014296-1090|AAF50681.2|  991|Drosophila melanogaster CG10289-PA
           protein.
          Length = 991

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
 Frame = -3

Query: 591 VSNSERYGG--SSALADNDEIPMWQSVI 514
           +S SE  G   +S+L+D DE+ +WQS+I
Sbjct: 624 ISESEHIGDLITSSLSDEDEVKLWQSLI 651


>AY060948-1|AAL28496.1|  784|Drosophila melanogaster GM08606p
           protein.
          Length = 784

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 569 PYRSELDTVTAKLALGDGFYTCLDDRTKDELVPIAXSCFRNK 694
           PYR+E+    A L+L  G Y  +   TKD  V +  S F N+
Sbjct: 633 PYRAEIVFYHALLSLCGGMYKAMGALTKDGRVRLPLSKFDNE 674


>AE013599-3826|AAF47171.1|  784|Drosophila melanogaster CG4065-PA,
           isoform A protein.
          Length = 784

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 569 PYRSELDTVTAKLALGDGFYTCLDDRTKDELVPIAXSCFRNK 694
           PYR+E+    A L+L  G Y  +   TKD  V +  S F N+
Sbjct: 633 PYRAEIVFYHALLSLCGGMYKAMGALTKDGRVRLPLSKFDNE 674


>AE013599-3825|AAX52681.1|  783|Drosophila melanogaster CG4065-PB,
           isoform B protein.
          Length = 783

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 569 PYRSELDTVTAKLALGDGFYTCLDDRTKDELVPIAXSCFRNK 694
           PYR+E+    A L+L  G Y  +   TKD  V +  S F N+
Sbjct: 632 PYRAEIVFYHALLSLCGGMYKAMGALTKDGRVRLPLSKFDNE 673


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,291,758
Number of Sequences: 53049
Number of extensions: 790773
Number of successful extensions: 2109
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2108
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)