Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12j21
(226 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99283-6|CAB16539.2| 556|Caenorhabditis elegans Hypothetical pr... 28 1.0
AF040650-3|ABE73333.1| 836|Caenorhabditis elegans Hypothetical ... 27 2.4
AF040650-2|AAT81190.1| 939|Caenorhabditis elegans Hypothetical ... 27 2.4
AF040650-1|AAB95011.1| 952|Caenorhabditis elegans Hypothetical ... 27 2.4
Z48009-9|CAA88085.1| 329|Caenorhabditis elegans Hypothetical pr... 26 3.1
AL032618-2|CAA21485.1| 640|Caenorhabditis elegans Hypothetical ... 25 5.5
Z77661-12|CAB01191.1| 381|Caenorhabditis elegans Hypothetical p... 25 7.2
Z77658-13|CAB01162.1| 381|Caenorhabditis elegans Hypothetical p... 25 7.2
Z49072-5|CAA88885.2| 1109|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z49067-4|CAA88853.2| 1109|Caenorhabditis elegans Hypothetical pr... 25 7.2
AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical ... 25 9.6
>Z99283-6|CAB16539.2| 556|Caenorhabditis elegans Hypothetical
protein Y70C5C.5 protein.
Length = 556
Score = 27.9 bits (59), Expect = 1.0
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 73 YFITYSKPSSLSINATFEFNKH 8
Y+IT++KP + + TF+ N H
Sbjct: 114 YYITHAKPENAETSCTFQMNLH 135
>AF040650-3|ABE73333.1| 836|Caenorhabditis elegans Hypothetical
protein T04B8.5c protein.
Length = 836
Score = 26.6 bits (56), Expect = 2.4
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +3
Query: 9 CLLNSKVAFMLKLLGLLYVIKYAA*KNGLLLFCLCTYLHANLFKVNYIVLFYKIN 173
C+L S V +L LLG K A L+ C T++ + +F VL K+N
Sbjct: 93 CVLVSLVLLVLSLLGSALFAKTALITFVLISVCYGTWIVSVIFNGRMEVLIPKVN 147
>AF040650-2|AAT81190.1| 939|Caenorhabditis elegans Hypothetical
protein T04B8.5b protein.
Length = 939
Score = 26.6 bits (56), Expect = 2.4
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +3
Query: 9 CLLNSKVAFMLKLLGLLYVIKYAA*KNGLLLFCLCTYLHANLFKVNYIVLFYKIN 173
C+L S V +L LLG K A L+ C T++ + +F VL K+N
Sbjct: 196 CVLVSLVLLVLSLLGSALFAKTALITFVLISVCYGTWIVSVIFNGRMEVLIPKVN 250
>AF040650-1|AAB95011.1| 952|Caenorhabditis elegans Hypothetical
protein T04B8.5a protein.
Length = 952
Score = 26.6 bits (56), Expect = 2.4
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +3
Query: 9 CLLNSKVAFMLKLLGLLYVIKYAA*KNGLLLFCLCTYLHANLFKVNYIVLFYKIN 173
C+L S V +L LLG K A L+ C T++ + +F VL K+N
Sbjct: 209 CVLVSLVLLVLSLLGSALFAKTALITFVLISVCYGTWIVSVIFNGRMEVLIPKVN 263
>Z48009-9|CAA88085.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.12 protein.
Length = 329
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 12 LLNSKVAFMLKLLGLLYVIKYAA*KNGLLLFCLCTYLHANLFKVNY----IVLFYK 167
L+ S +ML ++ + V+K + + + +ANL+++ Y +V+ YK
Sbjct: 28 LITSFFTYMLSIIAIKMVLKQSIFETSTKILLFLNIFYANLYQIVYSIDVVVILYK 83
>AL032618-2|CAA21485.1| 640|Caenorhabditis elegans Hypothetical
protein Y42A5A.2 protein.
Length = 640
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 87 NGLLLFCLCTYLHANLFKVNYIVLFYKINVRVNFG 191
NG+L+ +C+Y H N V FY +N + G
Sbjct: 117 NGVLIHSICSYRHLN-------VTFYTLNTQFGIG 144
>Z77661-12|CAB01191.1| 381|Caenorhabditis elegans Hypothetical
protein F40G12.11 protein.
Length = 381
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 106 QNSSKPFFHAAYFITYSKPSSLSINATFE 20
Q P A F+T S+P++L + TFE
Sbjct: 65 QAEQDPSKSADQFVTLSRPTTLGFSPTFE 93
>Z77658-13|CAB01162.1| 381|Caenorhabditis elegans Hypothetical
protein F40G12.11 protein.
Length = 381
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 106 QNSSKPFFHAAYFITYSKPSSLSINATFE 20
Q P A F+T S+P++L + TFE
Sbjct: 65 QAEQDPSKSADQFVTLSRPTTLGFSPTFE 93
>Z49072-5|CAA88885.2| 1109|Caenorhabditis elegans Hypothetical
protein C44F1.5 protein.
Length = 1109
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 22 RRSRLCSNYSAYYTL*NMLHEKTVYYCFVYVRTYMQ 129
R ++L S++ Y+ + H+ T+Y +Y TY Q
Sbjct: 59 RLNKLLSSFLPYHLINQARHQITLYKPHLYNETYSQ 94
>Z49067-4|CAA88853.2| 1109|Caenorhabditis elegans Hypothetical
protein C44F1.5 protein.
Length = 1109
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 22 RRSRLCSNYSAYYTL*NMLHEKTVYYCFVYVRTYMQ 129
R ++L S++ Y+ + H+ T+Y +Y TY Q
Sbjct: 59 RLNKLLSSFLPYHLINQARHQITLYKPHLYNETYSQ 94
>AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical
protein T05E7.3 protein.
Length = 997
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 87 NGLLLFCLCTYLHANLFKVNYIVLFYKINVRVN 185
+G+L+ + TY+ A + + YI ++ K +VR N
Sbjct: 131 SGILIIYMDTYIPAPIRERIYIAIYRKSDVREN 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,189,242
Number of Sequences: 27780
Number of extensions: 66814
Number of successful extensions: 167
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 12,740,198
effective HSP length: 54
effective length of database: 11,240,078
effective search space used: 224801560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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