Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12j14
         (571 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   2.1  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              23   2.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   2.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   2.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   2.8  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   3.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   3.7  

>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 42  LTTNQPIKIFKLKISNNYSRISTTE 116
           L  N  I++ +L ISNNY+   T E
Sbjct: 170 LVVNPEIELPQLDISNNYTTDCTIE 194


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -2

Query: 384 LHHYNVVVVFENRYCRDEDF*GFSSHKCLSLKLDISYK 271
           L  YN+  + E +Y  DED   F     L+ + D+  K
Sbjct: 87  LSTYNIAGIIEGQYHDDEDLKTFFHKIALTCEDDVHRK 124


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -3

Query: 419 PPVPSCCDPIILCTIITWLSFSKTGI 342
           P  P CC    +   ITWL +  + +
Sbjct: 351 PFCPDCCPSDRMVYFITWLGYVNSAL 376


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -3

Query: 419 PPVPSCCDPIILCTIITWLSFSKTGI 342
           P  P CC    +   ITWL +  + +
Sbjct: 351 PFCPDCCPSDRMVYFITWLGYVNSAL 376


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -3

Query: 419 PPVPSCCDPIILCTIITWLSFSKTGI 342
           P  P CC    +   ITWL +  + +
Sbjct: 351 PFCPDCCPSDRMVYFITWLGYVNSAL 376


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -1

Query: 136 ITNTSGPSVV 107
           ITNTSGP VV
Sbjct: 180 ITNTSGPGVV 189


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -1

Query: 136 ITNTSGPSVV 107
           ITNTSGP VV
Sbjct: 180 ITNTSGPGVV 189


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,248
Number of Sequences: 438
Number of extensions: 3287
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)