Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12i21
         (175 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          20   2.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      20   2.4  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    20   2.4  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    20   2.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    19   5.5  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    19   7.3  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    19   7.3  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    19   7.3  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +1

Query: 10  LKNIFYKSIEKKWPKKIFCCLFATQLKKNXLILQKRN 120
           + N   K+ E  W K I    ++T +  N +   +RN
Sbjct: 277 MSNDLGKTAEFDWNKPINSGFYSTIMYSNGVTFPQRN 313


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +1

Query: 10  LKNIFYKSIEKKWPKKIFCCLFATQLKKNXLILQKRN 120
           + N   K+ E  W K I    ++T +  N +   +RN
Sbjct: 277 MSNDLGKTAEFDWNKPINSGFYSTIMYSNGVTFPQRN 313


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 113 FCKISXFFFSCVA 75
           FC +   FF C+A
Sbjct: 453 FCLLFLMFFECIA 465


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 113 FCKISXFFFSCVA 75
           FC +   FF C+A
Sbjct: 506 FCLLFLMFFECIA 518


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 14  KTYFTKVLKKNGP 52
           +TY  K+++KN P
Sbjct: 159 ETYLDKLIEKNEP 171


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = -1

Query: 58  FFWAIFFQYFCKICFLTSH 2
           FF A       ++C+ T+H
Sbjct: 151 FFAATSLLVVAEVCYFTAH 169


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 1   NVMLKNIFYKSIEKKWPKKIFCCLFATQLKKN 96
           N M+  +   S+E K     FC +F   L  N
Sbjct: 191 NPMIAELETLSVEPKVSPMTFCRVFPFHLMFN 222


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 1   NVMLKNIFYKSIEKKWPKKIFCCLFATQLKKN 96
           N M+  +   S+E K     FC +F   L  N
Sbjct: 191 NPMIAELETLSVEPKVSPMTFCRVFPFHLMFN 222


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,001
Number of Sequences: 438
Number of extensions: 706
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 37
effective length of database: 130,137
effective search space used:  2602740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)