Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12i18
         (565 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014603-1|AAH14603.1|  233|Homo sapiens GLI pathogenesis-relate...    33   0.92 
AY358731-1|AAQ89093.1|  242|Homo sapiens ALKN2972 protein.             33   0.92 
AK127150-1|BAC86854.1|  552|Homo sapiens protein ( Homo sapiens ...    29   8.5  

>BC014603-1|AAH14603.1|  233|Homo sapiens GLI pathogenesis-related 1
           like 1 protein.
          Length = 233

 Score = 32.7 bits (71), Expect = 0.92
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 463 WDRELAFLAQRLSDQCQFVHDDC 531
           WD+ LA +A+  ++QC+F H+DC
Sbjct: 60  WDKGLAKMAKAWANQCKFEHNDC 82


>AY358731-1|AAQ89093.1|  242|Homo sapiens ALKN2972 protein.
          Length = 242

 Score = 32.7 bits (71), Expect = 0.92
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 463 WDRELAFLAQRLSDQCQFVHDDC 531
           WD+ LA +A+  ++QC+F H+DC
Sbjct: 60  WDKGLAKMAKAWANQCKFEHNDC 82


>AK127150-1|BAC86854.1|  552|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45207 fis, clone BRCAN2010665, highly  similar
           to Channel associated protein of synapse-110. ).
          Length = 552

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 219 YCAVRYRRLCQGKGLHVACQFPNAGPGSSCENYT 320
           +CA  ++R CQG G + +   P++GPG    N T
Sbjct: 32  HCACGWQRNCQGLG-YSSQTMPSSGPGGPASNRT 64


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,251,395
Number of Sequences: 237096
Number of extensions: 1712280
Number of successful extensions: 7733
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7683
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)