Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12i14
         (555 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09849-1|AAC50265.1|  173|Homo sapiens zinc finger protein protein.    35   0.17 
D87073-1|BAA13242.2| 1696|Homo sapiens KIAA0236 protein.               35   0.22 
BC117245-1|AAI17246.1|  472|Homo sapiens doublesex and mab-3 rel...    30   6.3  
BC113584-1|AAI13585.1|  472|Homo sapiens doublesex and mab-3 rel...    30   6.3  
AL136365-2|CAB99336.1|  472|Homo sapiens doublesex and mab-3 rel...    30   6.3  
AB180266-1|BAD20725.1|  229|Homo sapiens ABO glycosyltransferase...    30   6.3  

>U09849-1|AAC50265.1|  173|Homo sapiens zinc finger protein protein.
          Length = 173

 Score = 35.1 bits (77), Expect = 0.17
 Identities = 20/58 (34%), Positives = 22/58 (37%)
 Frame = -2

Query: 506 PLPILDCQLSSYVSLHSNICQVHLLRGHVRYAAFHYCLCDRQLVGQMVLMLVRHRLAH 333
           P P+  C   SY S H      H    H R   FH  LCD +      L L   R AH
Sbjct: 81  PAPLYPCHYCSYQSRHKQAVLSHENCKHTRLREFHCALCDYRTFSNTTL-LFHKRKAH 137


>D87073-1|BAA13242.2| 1696|Homo sapiens KIAA0236 protein.
          Length = 1696

 Score = 34.7 bits (76), Expect = 0.22
 Identities = 20/58 (34%), Positives = 22/58 (37%)
 Frame = -2

Query: 506 PLPILDCQLSSYVSLHSNICQVHLLRGHVRYAAFHYCLCDRQLVGQMVLMLVRHRLAH 333
           P P+  C   SY S H      H    H R   FH  LCD +      L L   R AH
Sbjct: 549 PSPLYPCHYCSYQSRHKQAVLSHENCKHTRLREFHCALCDYRTFSNTTL-LFHKRKAH 605


>BC117245-1|AAI17246.1|  472|Homo sapiens doublesex and mab-3
           related transcription factor 3 protein.
          Length = 472

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -2

Query: 434 LRGHVRYAAFHYCLCDRQLVGQMVLMLVRHRLAHLPLLSYRRQENRCLRPL 282
           L+GH RY  F  C C++      +L++ R R+    +   R+Q N  L  L
Sbjct: 41  LKGHKRYCRFKDCTCEK-----CILIIERQRVMAAQVALRRQQANESLESL 86


>BC113584-1|AAI13585.1|  472|Homo sapiens doublesex and mab-3
           related transcription factor 3 protein.
          Length = 472

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -2

Query: 434 LRGHVRYAAFHYCLCDRQLVGQMVLMLVRHRLAHLPLLSYRRQENRCLRPL 282
           L+GH RY  F  C C++      +L++ R R+    +   R+Q N  L  L
Sbjct: 41  LKGHKRYCRFKDCTCEK-----CILIIERQRVMAAQVALRRQQANESLESL 86


>AL136365-2|CAB99336.1|  472|Homo sapiens doublesex and mab-3
           related transcription factor 3 protein.
          Length = 472

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -2

Query: 434 LRGHVRYAAFHYCLCDRQLVGQMVLMLVRHRLAHLPLLSYRRQENRCLRPL 282
           L+GH RY  F  C C++      +L++ R R+    +   R+Q N  L  L
Sbjct: 41  LKGHKRYCRFKDCTCEK-----CILIIERQRVMAAQVALRRQQANESLESL 86


>AB180266-1|BAD20725.1|  229|Homo sapiens ABO glycosyltransferase
           protein.
          Length = 229

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 19/88 (21%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
 Frame = -2

Query: 476 SYVSLHSNICQVHLLRGHVRYAAFHYCLCDRQLVGQMVLMLVRHRLAHLPLLSYRRQENR 297
           +++ L     + H + GH      +Y   D+      V +    +L+ L + +Y+R +N 
Sbjct: 3   AFLKLFLETAEKHFMVGH---RVHYYVFTDQPAAVPRVTLGTGRQLSVLEVGAYKRWQNV 59

Query: 296 CLRPLSSVTSYC-KSLLSDVRVEPLLCI 216
            +R +  ++ +C +  LS+  V+ L+C+
Sbjct: 60  SMRRMEMISDFCERRFLSE--VDYLVCV 85


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,060,468
Number of Sequences: 237096
Number of extensions: 1300143
Number of successful extensions: 6768
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6768
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)