BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12i12
(623 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91117-2|CAC39181.1| 628|Homo sapiens SLC6A2 protein. 36 0.088
X91117-1|CAA62566.1| 617|Homo sapiens norepinephrine transporte... 36 0.088
M65105-1|AAA59943.1| 617|Homo sapiens noradrenaline transporter... 36 0.088
Z96810-2|CAI42799.1| 642|Homo sapiens solute carrier family 6 (... 33 0.82
BC093712-1|AAH93712.1| 642|Homo sapiens solute carrier family 6... 33 0.82
BC093710-1|AAH93710.1| 642|Homo sapiens solute carrier family 6... 33 0.82
AL034411-1|CAI43081.1| 642|Homo sapiens solute carrier family 6... 33 0.82
AF151978-1|AAD49223.1| 642|Homo sapiens amino acid transporter ... 33 0.82
BC067274-1|AAH67274.1| 750|Homo sapiens olfactomedin-like 2B pr... 31 2.5
BC047472-1|AAH47472.1| 233|Homo sapiens OLFML2B protein protein. 31 2.5
AL590408-1|CAH71496.1| 598|Homo sapiens olfactomedin-like 2B pr... 31 2.5
AL391825-3|CAH73987.1| 233|Homo sapiens olfactomedin-like 2B pr... 31 2.5
AL391825-1|CAH73984.1| 598|Homo sapiens olfactomedin-like 2B pr... 31 2.5
AL050137-1|CAB43286.1| 432|Homo sapiens hypothetical protein pr... 31 2.5
AB119054-1|BAD38863.1| 750|Homo sapiens photomedin-2 protein. 31 2.5
U27699-1|AAA87029.1| 614|Homo sapiens pephBGT-1 betaine-GABA tr... 31 3.3
L42300-1|AAA66574.1| 614|Homo sapiens betaine/GABA transporter ... 31 3.3
BC126217-1|AAI26218.1| 614|Homo sapiens solute carrier family 6... 31 3.3
BC126215-1|AAI26216.1| 614|Homo sapiens solute carrier family 6... 31 3.3
>X91117-2|CAC39181.1| 628|Homo sapiens SLC6A2 protein.
Length = 628
Score = 36.3 bits (80), Expect = 0.088
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 2/121 (1%)
Frame = +3
Query: 222 FVMYLALACILLANPLRHFEVYLGQWSISGPGRAFRIIPMFDXXXXXXXXXXXXXXXXXX 401
F++ L I+ PL + E+ LGQ++ G ++I P F
Sbjct: 94 FLIPYTLFLIIAGMPLFYMELALGQYNREGAATVWKICPFFKGVGYAVILIALYVGFYYN 153
Query: 402 TIAAIAAVYVLYSVADAKLPFTYCRDF--ELNSYEPKIIEFTSLTLHKSTYALKPAPIKE 575
I A ++Y L+S LP+T C N +PK++ + L H K P E
Sbjct: 154 VIIA-WSLYYLFSSFTLNLPWTDCGHTWNSPNCTDPKLLNGSVLGNHTKYSKYKFTPAAE 212
Query: 576 Y 578
+
Sbjct: 213 F 213
>X91117-1|CAA62566.1| 617|Homo sapiens norepinephrine transporter
protein.
Length = 617
Score = 36.3 bits (80), Expect = 0.088
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 2/121 (1%)
Frame = +3
Query: 222 FVMYLALACILLANPLRHFEVYLGQWSISGPGRAFRIIPMFDXXXXXXXXXXXXXXXXXX 401
F++ L I+ PL + E+ LGQ++ G ++I P F
Sbjct: 94 FLIPYTLFLIIAGMPLFYMELALGQYNREGAATVWKICPFFKGVGYAVILIALYVGFYYN 153
Query: 402 TIAAIAAVYVLYSVADAKLPFTYCRDF--ELNSYEPKIIEFTSLTLHKSTYALKPAPIKE 575
I A ++Y L+S LP+T C N +PK++ + L H K P E
Sbjct: 154 VIIA-WSLYYLFSSFTLNLPWTDCGHTWNSPNCTDPKLLNGSVLGNHTKYSKYKFTPAAE 212
Query: 576 Y 578
+
Sbjct: 213 F 213
>M65105-1|AAA59943.1| 617|Homo sapiens noradrenaline transporter
protein.
Length = 617
Score = 36.3 bits (80), Expect = 0.088
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 2/121 (1%)
Frame = +3
Query: 222 FVMYLALACILLANPLRHFEVYLGQWSISGPGRAFRIIPMFDXXXXXXXXXXXXXXXXXX 401
F++ L I+ PL + E+ LGQ++ G ++I P F
Sbjct: 94 FLIPYTLFLIIAGMPLFYMELALGQYNREGAATVWKICPFFKGVGYAVILIALYVGFYYN 153
Query: 402 TIAAIAAVYVLYSVADAKLPFTYCRDF--ELNSYEPKIIEFTSLTLHKSTYALKPAPIKE 575
I A ++Y L+S LP+T C N +PK++ + L H K P E
Sbjct: 154 VIIA-WSLYYLFSSFTLNLPWTDCGHTWNSPNCTDPKLLNGSVLGNHTKYSKYKFTPAAE 212
Query: 576 Y 578
+
Sbjct: 213 F 213
>Z96810-2|CAI42799.1| 642|Homo sapiens solute carrier family 6
(amino acid transporter),in 1 protein.
Length = 642
Score = 33.1 bits (72), Expect = 0.82
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = +3
Query: 222 FVMYLALACILLANPLRHFEVYLGQWSISGPGRAFRIIPMFDXXXXXXXXXXXXXXXXXX 401
F++ A+ L PL E LGQ++ GP +RI+P+F
Sbjct: 74 FLIPYAIMLALAGLPLFFLECSLGQFASLGPVSVWRILPLFQGVGITMVLISIFVTIYYN 133
Query: 402 TIAAIAAVYVLYSVADAKLPFTYC 473
I A ++Y +++ ++LP+ C
Sbjct: 134 VIIAY-SLYYMFASFQSELPWKNC 156
>BC093712-1|AAH93712.1| 642|Homo sapiens solute carrier family 6
(amino acid transporter), member 14 protein.
Length = 642
Score = 33.1 bits (72), Expect = 0.82
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = +3
Query: 222 FVMYLALACILLANPLRHFEVYLGQWSISGPGRAFRIIPMFDXXXXXXXXXXXXXXXXXX 401
F++ A+ L PL E LGQ++ GP +RI+P+F
Sbjct: 74 FLIPYAIMLALAGLPLFFLECSLGQFASLGPVSVWRILPLFQGVGITMVLISIFVTIYYN 133
Query: 402 TIAAIAAVYVLYSVADAKLPFTYC 473
I A ++Y +++ ++LP+ C
Sbjct: 134 VIIAY-SLYYMFASFQSELPWKNC 156
>BC093710-1|AAH93710.1| 642|Homo sapiens solute carrier family 6
(amino acid transporter), member 14 protein.
Length = 642
Score = 33.1 bits (72), Expect = 0.82
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = +3
Query: 222 FVMYLALACILLANPLRHFEVYLGQWSISGPGRAFRIIPMFDXXXXXXXXXXXXXXXXXX 401
F++ A+ L PL E LGQ++ GP +RI+P+F
Sbjct: 74 FLIPYAIMLALAGLPLFFLECSLGQFASLGPVSVWRILPLFQGVGITMVLISIFVTIYYN 133
Query: 402 TIAAIAAVYVLYSVADAKLPFTYC 473
I A ++Y +++ ++LP+ C
Sbjct: 134 VIIAY-SLYYMFASFQSELPWKNC 156
>AL034411-1|CAI43081.1| 642|Homo sapiens solute carrier family 6
(amino acid transporter),ene protein.
Length = 642
Score = 33.1 bits (72), Expect = 0.82
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = +3
Query: 222 FVMYLALACILLANPLRHFEVYLGQWSISGPGRAFRIIPMFDXXXXXXXXXXXXXXXXXX 401
F++ A+ L PL E LGQ++ GP +RI+P+F
Sbjct: 74 FLIPYAIMLALAGLPLFFLECSLGQFASLGPVSVWRILPLFQGVGITMVLISIFVTIYYN 133
Query: 402 TIAAIAAVYVLYSVADAKLPFTYC 473
I A ++Y +++ ++LP+ C
Sbjct: 134 VIIAY-SLYYMFASFQSELPWKNC 156
>AF151978-1|AAD49223.1| 642|Homo sapiens amino acid transporter B0+
protein.
Length = 642
Score = 33.1 bits (72), Expect = 0.82
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = +3
Query: 222 FVMYLALACILLANPLRHFEVYLGQWSISGPGRAFRIIPMFDXXXXXXXXXXXXXXXXXX 401
F++ A+ L PL E LGQ++ GP +RI+P+F
Sbjct: 74 FLIPYAIMLALAGLPLFFLECSLGQFASLGPVSVWRILPLFQGVGITMVLISIFVTIYYN 133
Query: 402 TIAAIAAVYVLYSVADAKLPFTYC 473
I A ++Y +++ ++LP+ C
Sbjct: 134 VIIAY-SLYYMFASFQSELPWKNC 156
>BC067274-1|AAH67274.1| 750|Homo sapiens olfactomedin-like 2B
protein.
Length = 750
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 428 IHRSYSGNCATVYGTYYSVDTYSYTN-TVKHRYNTKGSAGSTYAPLTEVNFEMTQRV 261
+ R++ GNC + G Y+VD+Y+ N + + ++T + L E + T ++
Sbjct: 668 LRRNFYGNCFVICGVLYAVDSYNQRNANISYAFDTHTNTQIVPRLLFENEYSYTTQI 724
>BC047472-1|AAH47472.1| 233|Homo sapiens OLFML2B protein protein.
Length = 233
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 428 IHRSYSGNCATVYGTYYSVDTYSYTN-TVKHRYNTKGSAGSTYAPLTEVNFEMTQRV 261
+ R++ GNC + G Y+VD+Y+ N + + ++T + L E + T ++
Sbjct: 151 LRRNFYGNCFVICGVLYAVDSYNQRNANISYAFDTHTNTQIVPRLLFENEYSYTTQI 207
>AL590408-1|CAH71496.1| 598|Homo sapiens olfactomedin-like 2B
protein.
Length = 598
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 428 IHRSYSGNCATVYGTYYSVDTYSYTN-TVKHRYNTKGSAGSTYAPLTEVNFEMTQRV 261
+ R++ GNC + G Y+VD+Y+ N + + ++T + L E + T ++
Sbjct: 516 LRRNFYGNCFVICGVLYAVDSYNQRNANISYAFDTHTNTQIVPRLLFENEYSYTTQI 572
>AL391825-3|CAH73987.1| 233|Homo sapiens olfactomedin-like 2B
protein.
Length = 233
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 428 IHRSYSGNCATVYGTYYSVDTYSYTN-TVKHRYNTKGSAGSTYAPLTEVNFEMTQRV 261
+ R++ GNC + G Y+VD+Y+ N + + ++T + L E + T ++
Sbjct: 151 LRRNFYGNCFVICGVLYAVDSYNQRNANISYAFDTHTNTQIVPRLLFENEYSYTTQI 207
>AL391825-1|CAH73984.1| 598|Homo sapiens olfactomedin-like 2B
protein.
Length = 598
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 428 IHRSYSGNCATVYGTYYSVDTYSYTN-TVKHRYNTKGSAGSTYAPLTEVNFEMTQRV 261
+ R++ GNC + G Y+VD+Y+ N + + ++T + L E + T ++
Sbjct: 516 LRRNFYGNCFVICGVLYAVDSYNQRNANISYAFDTHTNTQIVPRLLFENEYSYTTQI 572
>AL050137-1|CAB43286.1| 432|Homo sapiens hypothetical protein
protein.
Length = 432
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 428 IHRSYSGNCATVYGTYYSVDTYSYTN-TVKHRYNTKGSAGSTYAPLTEVNFEMTQRV 261
+ R++ GNC + G Y+VD+Y+ N + + ++T + L E + T ++
Sbjct: 350 LRRNFYGNCFVICGVLYAVDSYNQRNANISYAFDTHTNTQIVPRLLFENEYSYTTQI 406
>AB119054-1|BAD38863.1| 750|Homo sapiens photomedin-2 protein.
Length = 750
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 428 IHRSYSGNCATVYGTYYSVDTYSYTN-TVKHRYNTKGSAGSTYAPLTEVNFEMTQRV 261
+ R++ GNC + G Y+VD+Y+ N + + ++T + L E + T ++
Sbjct: 668 LRRNFYGNCFVICGVLYAVDSYNQRNANISYAFDTHTNTQIVPRLLFENEYSYTTQI 724
>U27699-1|AAA87029.1| 614|Homo sapiens pephBGT-1 betaine-GABA
transporter protein.
Length = 614
Score = 31.1 bits (67), Expect = 3.3
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +3
Query: 264 PLRHFEVYLGQWSISGPGRAFR-IIPMFDXXXXXXXXXXXXXXXXXXTIAAIAAVYVLYS 440
P+ EV LGQ++ G A+R I P+F I A A Y L+S
Sbjct: 88 PVFFLEVALGQYTSQGSVTAWRKICPLFQGIGLASVVIESYLNVYYIIILAWALFY-LFS 146
Query: 441 VADAKLPFTYCRDF 482
++LP+T C +F
Sbjct: 147 SFTSELPWTTCNNF 160
>L42300-1|AAA66574.1| 614|Homo sapiens betaine/GABA transporter
protein.
Length = 614
Score = 31.1 bits (67), Expect = 3.3
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +3
Query: 264 PLRHFEVYLGQWSISGPGRAFR-IIPMFDXXXXXXXXXXXXXXXXXXTIAAIAAVYVLYS 440
P+ EV LGQ++ G A+R I P+F I A A Y L+S
Sbjct: 88 PVFFLEVALGQYTSQGSVTAWRKICPLFQGIGLASVVIESYLNVYYIIILAWALFY-LFS 146
Query: 441 VADAKLPFTYCRDF 482
++LP+T C +F
Sbjct: 147 SFTSELPWTTCNNF 160
>BC126217-1|AAI26218.1| 614|Homo sapiens solute carrier family 6
(neurotransmitter transporter, betaine/GABA), member 12
protein.
Length = 614
Score = 31.1 bits (67), Expect = 3.3
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +3
Query: 264 PLRHFEVYLGQWSISGPGRAFR-IIPMFDXXXXXXXXXXXXXXXXXXTIAAIAAVYVLYS 440
P+ EV LGQ++ G A+R I P+F I A A Y L+S
Sbjct: 88 PVFFLEVALGQYTSQGSVTAWRKICPLFQGIGLASVVIESYLNVYYIIILAWALFY-LFS 146
Query: 441 VADAKLPFTYCRDF 482
++LP+T C +F
Sbjct: 147 SFTSELPWTTCNNF 160
>BC126215-1|AAI26216.1| 614|Homo sapiens solute carrier family 6
(neurotransmitter transporter, betaine/GABA), member 12
protein.
Length = 614
Score = 31.1 bits (67), Expect = 3.3
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +3
Query: 264 PLRHFEVYLGQWSISGPGRAFR-IIPMFDXXXXXXXXXXXXXXXXXXTIAAIAAVYVLYS 440
P+ EV LGQ++ G A+R I P+F I A A Y L+S
Sbjct: 88 PVFFLEVALGQYTSQGSVTAWRKICPLFQGIGLASVVIESYLNVYYIIILAWALFY-LFS 146
Query: 441 VADAKLPFTYCRDF 482
++LP+T C +F
Sbjct: 147 SFTSELPWTTCNNF 160
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,329,052
Number of Sequences: 237096
Number of extensions: 1548249
Number of successful extensions: 3012
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3012
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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