Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12i04
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          26   0.26 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      26   0.26 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   2.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.3  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   9.6  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = -1

Query: 512 HFSYGSLYNCFSFFHSASR*IPFPSTAFFCFLHHKYFIELVYNNTSNDVGDVA 354
           HF +   +N   F  S S   P     F+ FLH +          SND+G+V+
Sbjct: 230 HFYFMLNHNYPPFMLSNSLNFPQIRGEFYFFLHKQVLNRYYLERLSNDMGEVS 282



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 168 NVFNQ*LNIVYFFFALNHS 112
           N F + + + +F+F LNH+
Sbjct: 220 NYFTEDVGLNHFYFMLNHN 238


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = -1

Query: 512 HFSYGSLYNCFSFFHSASR*IPFPSTAFFCFLHHKYFIELVYNNTSNDVGDVA 354
           HF +   +N   F  S S   P     F+ FLH +          SND+G+V+
Sbjct: 230 HFYFMLNHNYPPFMLSNSLNFPQIRGEFYFFLHKQVLNRYYLERLSNDMGEVS 282



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 168 NVFNQ*LNIVYFFFALNHS 112
           N F + + + +F+F LNH+
Sbjct: 220 NYFTEDVGLNHFYFMLNHN 238


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 240 LDSEGKDFCDFTIADQNSVAESQGITPTTPSN 335
           +D  G  F  F + DQN+V     + P +P N
Sbjct: 322 MDENGLQF--FNLIDQNAVGCWNSLLPYSPEN 351



 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 429 ESCAGKWYLPAGRMEKGETIVQA 497
           +SC   W L  G +  G T +QA
Sbjct: 136 DSCDRLWVLDTGTIGIGNTTIQA 158


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +3

Query: 441 GKWYLPAG 464
           GKWYLP+G
Sbjct: 238 GKWYLPSG 245


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 452 FTCWQNGKRRNNCTGC 499
           FT  ++GK R+  TGC
Sbjct: 814 FTMTKSGKTRHQNTGC 829


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 607 ISPVSTNLYQEPPA 566
           +SPV+ NLY  P A
Sbjct: 256 LSPVTNNLYYSPLA 269


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,563
Number of Sequences: 438
Number of extensions: 3333
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)