Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12h24
         (489 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical p...    29   2.4  
Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical p...    29   2.4  
Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AF000194-5|AAK39377.2|  616|Caenorhabditis elegans Hypothetical ...    28   4.2  
Z83246-4|CAB05844.1|  414|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z73908-6|CAA98132.1|  414|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z78065-1|CAD54154.1|  547|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical
           protein D2085.5b protein.
          Length = 1007

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -2

Query: 305 RAAQMSLSK*IHVVSTFKIT--PHVSSLRTIKSRLATFVRRTSRIVKVFFFFIK 150
           RA   +LS  I   +TF ++  P ++    +KS  AT++   SRI K   F ++
Sbjct: 164 RACLRALSSVICWPTTFGMSKIPQIAEAANLKSNAATYLHLRSRIFKTLMFSVR 217


>Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical
           protein D2085.5a protein.
          Length = 1048

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -2

Query: 305 RAAQMSLSK*IHVVSTFKIT--PHVSSLRTIKSRLATFVRRTSRIVKVFFFFIK 150
           RA   +LS  I   +TF ++  P ++    +KS  AT++   SRI K   F ++
Sbjct: 205 RACLRALSSVICWPTTFGMSKIPQIAEAANLKSNAATYLHLRSRIFKTLMFSVR 258


>Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical
           protein D2085.5b protein.
          Length = 1007

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -2

Query: 305 RAAQMSLSK*IHVVSTFKIT--PHVSSLRTIKSRLATFVRRTSRIVKVFFFFIK 150
           RA   +LS  I   +TF ++  P ++    +KS  AT++   SRI K   F ++
Sbjct: 164 RACLRALSSVICWPTTFGMSKIPQIAEAANLKSNAATYLHLRSRIFKTLMFSVR 217


>Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical
           protein D2085.5a protein.
          Length = 1048

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -2

Query: 305 RAAQMSLSK*IHVVSTFKIT--PHVSSLRTIKSRLATFVRRTSRIVKVFFFFIK 150
           RA   +LS  I   +TF ++  P ++    +KS  AT++   SRI K   F ++
Sbjct: 205 RACLRALSSVICWPTTFGMSKIPQIAEAANLKSNAATYLHLRSRIFKTLMFSVR 258


>AF000194-5|AAK39377.2|  616|Caenorhabditis elegans Hypothetical
           protein ZC328.3a protein.
          Length = 616

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 148 SFIKKKKTFTILEVRRTKVASLD-FMVRKEETWGVILN 258
           SFI + K++ +L     KVA  D   + +EE W ++ N
Sbjct: 167 SFINRDKSYQVLTTAHQKVAGEDEKAMTREEVWDMVYN 204


>Z83246-4|CAB05844.1|  414|Caenorhabditis elegans Hypothetical
           protein F53B2.6 protein.
          Length = 414

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 316 LKESWARRDQKPER-VACTLLQILRAFMDREIMILVT*GDVI 438
           LK++WARR  KP      T L  L A    E M  V  GDVI
Sbjct: 66  LKDAWARRILKPAMGYTITSLGDLGAIQQVEQMHFVPLGDVI 107


>Z73908-6|CAA98132.1|  414|Caenorhabditis elegans Hypothetical
           protein F53B2.6 protein.
          Length = 414

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 316 LKESWARRDQKPER-VACTLLQILRAFMDREIMILVT*GDVI 438
           LK++WARR  KP      T L  L A    E M  V  GDVI
Sbjct: 66  LKDAWARRILKPAMGYTITSLGDLGAIQQVEQMHFVPLGDVI 107


>Z78065-1|CAD54154.1|  547|Caenorhabditis elegans Hypothetical
           protein T09E8.1d protein.
          Length = 547

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +3

Query: 222 GAQRGNMGGNFERAHNMDSLAQRHLSGAISQVEGELGEEGSKTRTGS 362
           G+   +  GN    H+    A RHLS +  Q+E   G    + ++GS
Sbjct: 25  GSPTSDQNGNSHHHHHHLPPAPRHLSSSHHQIETISGSSKLRAQSGS 71


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,810,432
Number of Sequences: 27780
Number of extensions: 223334
Number of successful extensions: 604
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)