Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12h22
(407 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 164 3e-41
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 163 5e-41
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 161 3e-40
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 161 3e-40
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 159 6e-40
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 159 6e-40
03_01_0034 + 318432-318825,318902-319851 156 7e-39
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 147 3e-36
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 84 4e-17
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 83 1e-16
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 82 2e-16
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 76 1e-14
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 52 2e-07
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 31 0.27
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 30 0.62
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 29 1.4
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251... 29 1.4
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 29 1.9
03_05_0094 + 20740373-20740948 28 3.3
10_01_0300 - 3257584-3258825 27 4.3
06_03_1488 + 30484904-30485134,30485239-30487159,30487255-304876... 27 5.7
12_01_0107 - 843820-846335,846400-846511 27 7.6
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 27 7.6
11_01_0107 - 801148-803633,803727-803860,803990-804006,804321-80... 27 7.6
08_02_0235 + 14627648-14628889 27 7.6
08_01_0749 + 7063297-7064370 27 7.6
07_01_1086 - 9930311-9931993 27 7.6
05_03_0216 + 10370531-10371922,10378656-10378808 27 7.6
04_01_0187 - 2153546-2154520,2154581-2155858 27 7.6
02_01_0055 + 410661-411380,411481-413733,414486-414875,414983-41... 27 7.6
01_06_0160 - 27095727-27096008,27096164-27096652,27096983-270971... 27 7.6
01_06_0029 + 25751750-25752077,25753501-25753622,25754344-257545... 27 7.6
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 164 bits (398), Expect = 3e-41
Identities = 71/91 (78%), Positives = 80/91 (87%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MREI+H+Q G+CGNQIG+KFWEVI DEHGID G+Y GDSDLQLERINVYYNEA G +YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PRAVL+DLEP TMDS+R GPYG I+RPDN V
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFV 91
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 163 bits (396), Expect = 5e-41
Identities = 70/91 (76%), Positives = 80/91 (87%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MREI+H+Q G+CGNQIG+KFWEVI DEHG+D GRY GDSDLQLERINVYYNEA G +YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PRAVL+DLEP TMDS+R GP+G I+RPDN V
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFV 91
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 161 bits (390), Expect = 3e-40
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 131 RMREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKY 310
+MREI+H+Q G+CGNQIGSKFWEV+ DEHGIDP GRY G SDLQLER+NVYYNEA ++
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRF 239
Query: 311 VPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
VPRAVL+DLEP TMDS+R GPYG I+RPDN V
Sbjct: 240 VPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFV 271
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 161 bits (390), Expect = 3e-40
Identities = 69/91 (75%), Positives = 80/91 (87%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MREI+H+Q G+CGNQIG+KFWEVI DEHGID G+Y GDSDLQLERINVYYNEA G ++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PRAVL+DLEP TMDS+R GP+G I+RPDN V
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFV 91
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 159 bits (387), Expect = 6e-40
Identities = 68/91 (74%), Positives = 80/91 (87%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MREI+H+Q G+CGNQIG+KFWEV+ DEHGIDP GRY G+SDLQLER+NVYYNEA ++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PRAVL+DLEP TMDS+R GPYG I+RPDN V
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFV 91
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 159 bits (387), Expect = 6e-40
Identities = 69/91 (75%), Positives = 79/91 (86%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MREI+H+Q G+CGNQIGSKFWEV+ DEHGIDP GRY G SDLQLER+NVYYNEA ++V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PRAVL+DLEP TMDS+R GPYG I+RPDN V
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFV 91
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 156 bits (378), Expect = 7e-39
Identities = 67/91 (73%), Positives = 78/91 (85%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MREI+H+Q G+CGNQIG+KFWEV+ EHGID GRY GDSDLQLER+NVYYNEA ++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PRAVL+DLEP TMDS+R GPYG I+RPDN V
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGHIFRPDNFV 91
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 147 bits (357), Expect = 3e-36
Identities = 64/91 (70%), Positives = 75/91 (82%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MREI+H+Q G+CGNQIG+KFWEVI EHG+DP G Y G S QLERINVY+NEA G ++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PRAVL+DLEP TMDS+R GP G I+RPDN V
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPIGGIFRPDNFV 91
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 84.2 bits (199), Expect = 4e-17
Identities = 34/93 (36%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAK 307
MREI+ + +G+ G Q+G+ WE+ EHGI+P G D+ + + + N +++E K
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 308 YVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
+VPRA+ VDLEP+ +D +R G Y ++ P+ ++
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLI 93
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 82.6 bits (195), Expect = 1e-16
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAK 307
MRE + + +G+ G Q+G+ WE+ EHGI P G+ GD + + N +++E K
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 308 YVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
+VPRAV VDLEP+ +D +R G Y ++ P+ ++
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLI 93
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 81.8 bits (193), Expect = 2e-16
Identities = 36/89 (40%), Positives = 58/89 (65%)
Frame = +2
Query: 137 REIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVP 316
REI+ +QVG+CGNQIG +FW+ + EHGI G + + +R +V++ +A Y+P
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 317 RAVLVDLEPSTMDSIRGGPYGSIYRPDNV 403
RA+LVDLEP ++ I+ Y ++Y +N+
Sbjct: 63 RALLVDLEPRVINGIQNSEYRNLYNHENI 91
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 75.8 bits (178), Expect = 1e-14
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAK 307
MRE + + +G+ G Q+G+ WE+ EHGI G+ D + + N +++E K
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 308 YVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
+VPRAV VDLEP+ +D +R G Y ++ P+ ++
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLI 93
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 51.6 bits (118), Expect = 2e-07
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +2
Query: 266 ERINVYYNEAFGAKYVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
+ N +++E K+VPRA+ VDLEP+ +D ++ GPY ++ P+ ++
Sbjct: 107 DAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLI 153
Score = 42.3 bits (95), Expect = 1e-04
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDS 253
MREI+ + +G+ G Q+G+ WE+ EHGI P G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRDA 40
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 31.5 bits (68), Expect = 0.27
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEV------ISDEHGIDPCGRYQG-DSDLQLERINVYYNE 292
MRE V VQVG N +GS FW ++D+ DP + D D+ L R +
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGLADDPDADPVFKNAALDMDV-LYRSGETHQG 59
Query: 293 AFGAKYVPRAVLVD 334
A Y PR V VD
Sbjct: 60 V--ATYCPRLVSVD 71
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 30.3 bits (65), Expect = 0.62
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFW 196
MRE V VQVG N +GS FW
Sbjct: 1 MREAVTVQVGGFANYVGSHFW 21
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 170 GNQIGSKFWEVISDEHG--IDPCGRYQGDSDLQLERIN 277
G+Q SKFW+ + +E G ++ Y +D Q ER+N
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTERVN 577
>03_05_1091 + 30322035-30322739,30322861-30324043,30324114-30325105,
30326409-30326798,30326896-30330060
Length = 2144
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 305 KYVPRAVLVDLEPSTMDSIRGGPYGSIY 388
KY P L+DL+P + ++R Y S+Y
Sbjct: 1298 KYAPPTELIDLQPLPVTALRNARYESLY 1325
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 170 GNQIGSKFWEVISDEHG--IDPCGRYQGDSDLQLERIN 277
G+Q SKFW+ + +E G ++ Y +D Q ER+N
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVN 368
>03_05_0094 + 20740373-20740948
Length = 191
Score = 27.9 bits (59), Expect = 3.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 227 GRFRARQISLPKTSSQSGSHISRPVR 150
G+ RA Q ++SS + SH++ PVR
Sbjct: 79 GQLRAHQFPAVRSSSAASSHVASPVR 104
>10_01_0300 - 3257584-3258825
Length = 413
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 170 GNQIGSKFWEVISDEHG--IDPCGRYQGDSDLQLERIN 277
G+Q S FW+ + +E G ++ Y +D Q ER+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDRQTERVN 158
>06_03_1488 +
30484904-30485134,30485239-30487159,30487255-30487691,
30487777-30487983
Length = 931
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 85 VLPQLFSINSLLLIHENERNSSRTGREMWEPDWLEVLGSD 204
V Q+ S+ + + E + S RE W W+EVL D
Sbjct: 860 VWQQVQSVRNPPVQQETQTVESMVAREAWTSPWIEVLHED 899
>12_01_0107 - 843820-846335,846400-846511
Length = 875
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 227 PCGRYQGDSDLQLERINVYYNEAFGAKYVP 316
PCG + GDS L + I+ YY++ +Y P
Sbjct: 611 PCG-FDGDSILDSDIIDSYYDQGNPPRYPP 639
>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
Length = 581
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 170 GNQIGSKFWEVISDEHG--IDPCGRYQGDSDLQLERIN 277
G+Q S FW+ + +E G ++ Y +D Q ER+N
Sbjct: 289 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 326
>11_01_0107 -
801148-803633,803727-803860,803990-804006,804321-804504,
804819-804883
Length = 961
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 227 PCGRYQGDSDLQLERINVYYNEAFGAKYVP 316
PCG + GDS L + I+ YY++ +Y P
Sbjct: 697 PCG-FDGDSILDSDIIDSYYDQGNPPRYPP 725
>08_02_0235 + 14627648-14628889
Length = 413
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 170 GNQIGSKFWEVISDEHG--IDPCGRYQGDSDLQLERIN 277
G+Q S FW+ + +E G ++ Y +D Q ER+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 158
>08_01_0749 + 7063297-7064370
Length = 357
Score = 26.6 bits (56), Expect = 7.6
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 170 GNQIGSKFWEVISDEHG--IDPCGRYQGDSDLQLERIN 277
G+Q SKFW+ + E G ++ Y +D Q ER+N
Sbjct: 65 GSQFTSKFWQKLQLEMGTRLNFSTAYHPQTDGQTERVN 102
>07_01_1086 - 9930311-9931993
Length = 560
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 170 GNQIGSKFWEVISDEHG--IDPCGRYQGDSDLQLERIN 277
G+Q S FW+ + +E G ++ Y +D Q ER+N
Sbjct: 268 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 305
>05_03_0216 + 10370531-10371922,10378656-10378808
Length = 514
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 170 GNQIGSKFWEVISDEHG--IDPCGRYQGDSDLQLERIN 277
G+Q S FW+ + +E G ++ Y +D Q ER+N
Sbjct: 254 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 291
>04_01_0187 - 2153546-2154520,2154581-2155858
Length = 750
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 170 GNQIGSKFWEVISDEHG--IDPCGRYQGDSDLQLERIN 277
G+Q S FW+ + +E G ++ Y +D Q ER+N
Sbjct: 504 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 541
>02_01_0055 + 410661-411380,411481-413733,414486-414875,414983-418153
Length = 2177
Score = 26.6 bits (56), Expect = 7.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 305 KYVPRAVLVDLEPSTMDSIRGGPYGSIY 388
KY P L+DL+P + ++R Y +Y
Sbjct: 1329 KYAPPTELLDLQPLPVTALRNARYEGLY 1356
>01_06_0160 -
27095727-27096008,27096164-27096652,27096983-27097132,
27097656-27097920,27097995-27098274,27100311-27100388,
27100597-27101240,27101334-27101412,27101489-27101612,
27101782-27101882,27102870-27103068
Length = 896
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 238 AATGVDSVLVRYHFPKLRANLVPTSP 161
A TGV V ++Y P+ + +L TSP
Sbjct: 721 ATTGVPGVSMKYSMPQYKGSLPATSP 746
>01_06_0029 +
25751750-25752077,25753501-25753622,25754344-25754540,
25754641-25754815,25755126-25755260,25755374-25755583
Length = 388
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -1
Query: 242 GSGHRGRFRARQISLPKTSSQSGSHISRP 156
GSG G RA QI L Q H+ RP
Sbjct: 9 GSGDAGFVRADQIDLKSLDEQLERHLGRP 37
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,582,561
Number of Sequences: 37544
Number of extensions: 172975
Number of successful extensions: 451
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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