Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12h22
(407 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 169 9e-43
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 168 1e-42
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 168 1e-42
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 166 5e-42
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 161 1e-40
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 160 3e-40
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 123 4e-29
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 123 4e-29
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 87 3e-18
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 85 1e-17
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 85 2e-17
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 85 2e-17
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 84 3e-17
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 84 3e-17
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 84 3e-17
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 84 4e-17
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 83 7e-17
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 83 1e-16
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 83 1e-16
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 82 1e-16
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 80 7e-16
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 80 7e-16
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 73 1e-13
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 71 2e-13
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 71 2e-13
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 63 6e-11
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 169 bits (410), Expect = 9e-43
Identities = 73/91 (80%), Positives = 80/91 (87%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MREIVH+Q G+CGNQIG+KFWEVISDEHGIDP G Y GDSDLQLERINVYYNEA G KYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PRA LVDLEP TMDS+R GP+G ++RPDN V
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFV 91
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 168 bits (409), Expect = 1e-42
Identities = 74/91 (81%), Positives = 81/91 (89%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MREIVH+Q G+CGNQIGSKFWEVISDEHGIDP G+Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PRAVLVDLEP TMDS+R GP+G ++RPDN V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYV 91
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 168 bits (409), Expect = 1e-42
Identities = 74/91 (81%), Positives = 81/91 (89%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MREIVH+Q G+CGNQIGSKFWEVISDEHGIDP G+Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PRAVLVDLEP TMDS+R GP+G ++RPDN V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYV 91
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 166 bits (404), Expect = 5e-42
Identities = 73/91 (80%), Positives = 81/91 (89%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MREIVHVQ G+CGNQIG+KFWEVISDEHGI P G Y+G+SDLQLERINVYYNEA G KYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PRAVLVDLEP TMDS+R GP+G ++RPDN V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFV 91
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 161 bits (392), Expect = 1e-40
Identities = 71/91 (78%), Positives = 80/91 (87%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MREIVHVQ G+CGNQIGSKFWEVISDEHGI P G ++G+SDLQLERI+VYYNEA KYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PRAVLVDLEP TMDS+R GP+G ++RPDN V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFV 91
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 160 bits (389), Expect = 3e-40
Identities = 70/91 (76%), Positives = 80/91 (87%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MREIVHVQ G+CGNQIGSKFWEVISDEHGI P G ++G++DLQLERI+VYYNEA KYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PRAVLVDLEP TMDS+R GP+G ++RPDN V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFV 91
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 123 bits (297), Expect = 4e-29
Identities = 52/91 (57%), Positives = 70/91 (76%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
M+EI++VQVG+CGNQIG+KFWE IS+EHG+ G Y+GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PRA+LVDL+P +++ +R YG ++ P+N V
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAV 91
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 123 bits (297), Expect = 4e-29
Identities = 52/91 (57%), Positives = 70/91 (76%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
M+EI++VQVG+CGNQIG+KFWE IS+EHG+ G Y+GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PRA+LVDL+P +++ +R YG ++ P+N V
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAV 91
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 87.4 bits (207), Expect = 3e-18
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Frame = +2
Query: 125 YTRMREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDS--DLQLERINVYYNEAF 298
Y RE++ + VG+ G QIG+ WE+ EHGI P G + D D + E IN ++ E
Sbjct: 4 YKGSREVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETA 63
Query: 299 GAKYVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
G K+VPR + VDLEP+ +D +R G Y S++ P+ ++
Sbjct: 64 GGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLL 99
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 85.4 bits (202), Expect = 1e-17
Identities = 34/91 (37%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = +2
Query: 137 REIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRY-QGDSDLQLERINVYYNEAFGAKYV 313
RE V + +G+ G QIG+ WE+ EHG+D G + + + + + + +++E+ K+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PRA+ VDLEP+ +D IR G YG+++ PD ++
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQII 96
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 84.6 bits (200), Expect = 2e-17
Identities = 34/91 (37%), Positives = 54/91 (59%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MRE++ + VG+ G QIG+ WE+ EHGI P G D E ++++ +YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PR++ VDLEP+ +D IR G Y ++ P+ ++
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMI 91
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 84.6 bits (200), Expect = 2e-17
Identities = 34/91 (37%), Positives = 54/91 (59%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MRE++ + VG+ G QIG+ WE+ EHGI P G D E ++++ +YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PR++ VDLEP+ +D IR G Y ++ P+ ++
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMI 91
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 84.2 bits (199), Expect = 3e-17
Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDL--QLERINVYYNEAFGAK 307
MRE++ + +G+ G QIG+ WE+ EHGI P G+ D L + + +++E +
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 308 YVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
+VPRAV+VDLEP+ +D IR G Y S++ P+ ++
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLI 93
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 84.2 bits (199), Expect = 3e-17
Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDL--QLERINVYYNEAFGAK 307
MRE++ + +G+ G QIG+ WE+ EHGI P G+ D L + + +++E +
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 308 YVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
+VPRAV+VDLEP+ +D IR G Y S++ P+ ++
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLI 93
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 84.2 bits (199), Expect = 3e-17
Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDL--QLERINVYYNEAFGAK 307
MRE++ + +G+ G QIG+ WE+ EHGI P G+ D L + + +++E +
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 308 YVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
+VPRAV+VDLEP+ +D IR G Y S++ P+ ++
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLI 93
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 83.8 bits (198), Expect = 4e-17
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLE--RINVYYNEAFGAK 307
MREIV + +G+ G QIG+ WE+ EHGI P G D+ +E N +++E K
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 308 YVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
+VPRA+ VDLEP+ +D +R G Y ++ P+ ++
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLI 93
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 83.0 bits (196), Expect = 7e-17
Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Frame = +2
Query: 131 RMREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLE--RINVYYNEAFGA 304
R RE++ + VG+ G Q+G+ WE+ EHGI P G + L ++ N +++E
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 305 KYVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
K+VPRA++VDLEP+ +D IR G Y +++ P+ ++
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLL 98
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 82.6 bits (195), Expect = 1e-16
Identities = 34/91 (37%), Positives = 55/91 (60%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MRE++ + VG+ G QIG+ WE+ EHGI P G S + E ++++ +YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PR++ VDLEP+ +D IR G Y ++ P+ ++
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMI 91
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 82.6 bits (195), Expect = 1e-16
Identities = 34/91 (37%), Positives = 55/91 (60%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MRE++ + VG+ G QIG+ WE+ EHGI P G S + E ++++ +YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PR++ VDLEP+ +D IR G Y ++ P+ ++
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMI 91
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 82.2 bits (194), Expect = 1e-16
Identities = 35/92 (38%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Frame = +2
Query: 137 REIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDL--QLERINVYYNEAFGAKY 310
RE++ + +G+ G QIG+ WE+ EHGI P G+ D L + + +++E ++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 311 VPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
VPRAV+VDLEP+ +D IR G Y S++ P+ ++
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLI 92
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 79.8 bits (188), Expect = 7e-16
Identities = 32/91 (35%), Positives = 54/91 (59%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MRE++ + VG+ G QIG+ WE+ EHGI P G + + ++++ +YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PR++ VDLEP+ +D IR G Y ++ P+ ++
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMI 91
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 79.8 bits (188), Expect = 7e-16
Identities = 32/91 (35%), Positives = 54/91 (59%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MRE++ + VG+ G QIG+ WE+ EHGI P G + + ++++ +YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PR++ VDLEP+ +D IR G Y ++ P+ ++
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMI 91
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 72.5 bits (170), Expect = 1e-13
Identities = 32/91 (35%), Positives = 55/91 (60%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MRE++ + VG+ G QIG+ WE+ EHGI P G + D + ++++ ++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PR++ VDLEP+ +D IR G Y ++ P+ ++
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQML 90
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 71.3 bits (167), Expect = 2e-13
Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +2
Query: 143 IVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRA 322
++ V VG+CGNQ+ FW+ + DEHGI+ G+ + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 323 VLVDLEPSTMDSIRGGP-YGSIYRPDNV 403
VLVDLEP ++ + P + +++ DN+
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNI 93
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 71.3 bits (167), Expect = 2e-13
Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +2
Query: 143 IVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRA 322
++ V VG+CGNQ+ FW+ + DEHGI+ G+ + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 323 VLVDLEPSTMDSIRGGP-YGSIYRPDNV 403
VLVDLEP ++ + P + +++ DN+
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNI 93
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 63.3 bits (147), Expect = 6e-11
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Frame = +2
Query: 212 EHGIDPCGRYQGDS--DLQLERINVYYNEAFGAKYVPRAVLVDLEPSTMDSIRGGPYGSI 385
EHGI P G + D D + E IN ++ E G K+VPR + VDLEP+ +D +R G Y S+
Sbjct: 5 EHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSL 64
Query: 386 YRPDNVV 406
+ P+ ++
Sbjct: 65 FHPEQLL 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,249,186
Number of Sequences: 27780
Number of extensions: 150113
Number of successful extensions: 488
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -