Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12h19
(532 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 217 5e-57
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 213 5e-56
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 213 5e-56
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 213 9e-56
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 208 1e-54
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 207 3e-54
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 153 6e-38
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 153 6e-38
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 119 1e-27
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 119 1e-27
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 118 2e-27
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 118 2e-27
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 117 5e-27
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 116 1e-26
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 115 2e-26
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 115 2e-26
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 115 2e-26
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 114 3e-26
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 114 3e-26
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 113 7e-26
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 111 2e-25
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 109 2e-24
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 108 3e-24
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 86 2e-17
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 86 2e-17
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 85 2e-17
AF038606-7|AAB92021.1| 344|Caenorhabditis elegans Hypothetical ... 34 0.073
AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical ... 31 0.68
U41992-5|AAA83356.1| 549|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 29 1.6
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 29 1.6
Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81592-10|CAB04732.1| 240|Caenorhabditis elegans Hypothetical p... 29 2.7
AY731377-1|AAW63419.1| 240|Caenorhabditis elegans eukaryotic in... 29 2.7
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 28 3.6
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 4.8
U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical pr... 28 4.8
U42839-4|AAM54197.1| 114|Caenorhabditis elegans Hypothetical pr... 28 4.8
U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical p... 28 4.8
U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical pr... 28 4.8
U00035-2|AAA50644.2| 413|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 27 6.3
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 217 bits (529), Expect = 5e-57
Identities = 92/121 (76%), Positives = 108/121 (89%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYV 347
MREI+++Q G CGNQIG KFWEVISDEHGIDP+G Y+GDSDLQLERINVYYNEAS GKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 348 PRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVI 527
PR L+DL+P TMD+VR+GPFG LFRPDNFV+GQ+ A NNWAKGHYTEG E++++ LDV+
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 528 R 530
R
Sbjct: 121 R 121
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 213 bits (521), Expect = 5e-56
Identities = 92/121 (76%), Positives = 107/121 (88%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYV 347
MREI+++Q G CGNQIG KFWEVISDEHGIDPSG Y GDSDLQLERINVYYNEA + KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 348 PRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVI 527
PR VL+DL+P TMD+VRSGPFG LFRPDN+V+GQ+ A NNWAKGHYTEG E++++ LDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 528 R 530
R
Sbjct: 121 R 121
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 213 bits (521), Expect = 5e-56
Identities = 92/121 (76%), Positives = 107/121 (88%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYV 347
MREI+++Q G CGNQIG KFWEVISDEHGIDPSG Y GDSDLQLERINVYYNEA + KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 348 PRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVI 527
PR VL+DL+P TMD+VRSGPFG LFRPDN+V+GQ+ A NNWAKGHYTEG E++++ LDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 528 R 530
R
Sbjct: 121 R 121
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 213 bits (519), Expect = 9e-56
Identities = 91/121 (75%), Positives = 106/121 (87%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYV 347
MREI+++Q G CGNQIG KFWEVISDEHGI P G Y G+SDLQLERINVYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 348 PRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVI 527
PR VL+DL+P TMD+VRSGPFG LFRPDNFV+GQ+ A NNWAKGHYTEG E++++ LDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 528 R 530
R
Sbjct: 121 R 121
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 208 bits (509), Expect = 1e-54
Identities = 90/121 (74%), Positives = 106/121 (87%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYV 347
MREI+++Q G CGNQIG KFWEVISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 348 PRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVI 527
PR VL+DL+P TMD+VRSGPFG LFRPDNFV+GQ+ A NNWAKGHYTEG E++++ LDVI
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 528 R 530
R
Sbjct: 121 R 121
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 207 bits (506), Expect = 3e-54
Identities = 89/121 (73%), Positives = 106/121 (87%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYV 347
MREI+++Q G CGNQIG KFWEVISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 348 PRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVI 527
PR VL+DL+P TMD+VRSGPFG LFRPDNFV+GQ+ A NNWAKGHYTEG E++++ LDVI
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 528 R 530
R
Sbjct: 121 R 121
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 153 bits (372), Expect = 6e-38
Identities = 67/121 (55%), Positives = 87/121 (71%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYV 347
M+EIIN+QVG CGNQIG KFWE IS+EHG+ G Y GD+ QLERI YY E KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 348 PRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVI 527
PR +L+DL P +++ VRS +G LF P+N V G++ A NNW++G+Y +G EI++ L VI
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 528 R 530
R
Sbjct: 121 R 121
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 153 bits (372), Expect = 6e-38
Identities = 67/121 (55%), Positives = 87/121 (71%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYV 347
M+EIIN+QVG CGNQIG KFWE IS+EHG+ G Y GD+ QLERI YY E KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 348 PRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVI 527
PR +L+DL P +++ VRS +G LF P+N V G++ A NNW++G+Y +G EI++ L VI
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 528 R 530
R
Sbjct: 121 R 121
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 119 bits (287), Expect = 1e-27
Identities = 50/121 (41%), Positives = 76/121 (62%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYV 347
MRE+I++ VG G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 348 PRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVI 527
PR++ +DL+P +D +R+G + LF P+ + G+ AANN+A+GHYT G E++++ LD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 528 R 530
R
Sbjct: 121 R 121
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 119 bits (287), Expect = 1e-27
Identities = 50/121 (41%), Positives = 76/121 (62%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYV 347
MRE+I++ VG G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 348 PRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVI 527
PR++ +DL+P +D +R+G + LF P+ + G+ AANN+A+GHYT G E++++ LD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 528 R 530
R
Sbjct: 121 R 121
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 118 bits (285), Expect = 2e-27
Identities = 50/121 (41%), Positives = 78/121 (64%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYV 347
MRE+I++ VG G QIG WE+ EHGI P G S + E ++++ +G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 348 PRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVI 527
PR++ +DL+P +D +R+G + LF P+ + G+ AANN+A+GHYT G E++++ LD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 528 R 530
R
Sbjct: 121 R 121
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 118 bits (285), Expect = 2e-27
Identities = 50/121 (41%), Positives = 78/121 (64%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYV 347
MRE+I++ VG G QIG WE+ EHGI P G S + E ++++ +G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 348 PRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVI 527
PR++ +DL+P +D +R+G + LF P+ + G+ AANN+A+GHYT G E++++ LD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 528 R 530
R
Sbjct: 121 R 121
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 117 bits (282), Expect = 5e-27
Identities = 50/125 (40%), Positives = 81/125 (64%), Gaps = 2/125 (1%)
Frame = +3
Query: 162 NKMREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLE--RINVYYNEASA 335
N+ RE+I++ VG G Q+G WE+ EHGI P G + + L ++ N +++E A
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 336 GKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESA 515
GK+VPR +++DL+P +D +R+G + LF P+ + G+ AANN+A+GHYT G EI++
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Query: 516 LDVIR 530
+D +R
Sbjct: 124 MDRVR 128
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 116 bits (278), Expect = 1e-26
Identities = 50/123 (40%), Positives = 78/123 (63%), Gaps = 2/123 (1%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLE--RINVYYNEASAGK 341
MREI+++ +G G QIG WE+ EHGI P G D+ +E N +++E +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 342 YVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALD 521
+VPR + +DL+P +D VR+G + LF P+ + G+ AANN+A+GHYT G E+++ +D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 522 VIR 530
+R
Sbjct: 121 RVR 123
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 115 bits (277), Expect = 2e-26
Identities = 51/123 (41%), Positives = 78/123 (63%), Gaps = 2/123 (1%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL--QLERINVYYNEASAGK 341
MRE+I++ +G G QIG WE+ EHGI P G D L + + +++E +G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 342 YVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALD 521
+VPR V++DL+P +D +R+G + LF P+ + G+ AANN+A+GHYT G EI++ LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 522 VIR 530
IR
Sbjct: 121 RIR 123
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 115 bits (277), Expect = 2e-26
Identities = 51/123 (41%), Positives = 78/123 (63%), Gaps = 2/123 (1%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL--QLERINVYYNEASAGK 341
MRE+I++ +G G QIG WE+ EHGI P G D L + + +++E +G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 342 YVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALD 521
+VPR V++DL+P +D +R+G + LF P+ + G+ AANN+A+GHYT G EI++ LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 522 VIR 530
IR
Sbjct: 121 RIR 123
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 115 bits (277), Expect = 2e-26
Identities = 51/123 (41%), Positives = 78/123 (63%), Gaps = 2/123 (1%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL--QLERINVYYNEASAGK 341
MRE+I++ +G G QIG WE+ EHGI P G D L + + +++E +G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 342 YVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALD 521
+VPR V++DL+P +D +R+G + LF P+ + G+ AANN+A+GHYT G EI++ LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 522 VIR 530
IR
Sbjct: 121 RIR 123
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 114 bits (275), Expect = 3e-26
Identities = 48/121 (39%), Positives = 76/121 (62%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYV 347
MRE+I++ VG G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 348 PRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVI 527
PR++ +DL+P +D +R+G + LF P+ + G+ AANN+A+GHYT G E++++ LD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 528 R 530
R
Sbjct: 121 R 121
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 114 bits (275), Expect = 3e-26
Identities = 48/121 (39%), Positives = 76/121 (62%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYV 347
MRE+I++ VG G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 348 PRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVI 527
PR++ +DL+P +D +R+G + LF P+ + G+ AANN+A+GHYT G E++++ LD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 528 R 530
R
Sbjct: 121 R 121
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 113 bits (272), Expect = 7e-26
Identities = 50/122 (40%), Positives = 77/122 (63%), Gaps = 2/122 (1%)
Frame = +3
Query: 171 REIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL--QLERINVYYNEASAGKY 344
RE+I++ +G G QIG WE+ EHGI P G D L + + +++E +G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 345 VPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDV 524
VPR V++DL+P +D +R+G + LF P+ + G+ AANN+A+GHYT G EI++ LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 525 IR 530
IR
Sbjct: 121 IR 122
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 111 bits (268), Expect = 2e-25
Identities = 47/121 (38%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
Frame = +3
Query: 171 REIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCY-HGDSDLQLERINVYYNEASAGKYV 347
RE +++ +G G QIG WE+ EHG+D +G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 348 PRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVI 527
PR + +DL+P +D +R+G +G LF PD + G+ AANN+A+GHYT G E+++ LD I
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 528 R 530
R
Sbjct: 126 R 126
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 109 bits (261), Expect = 2e-24
Identities = 49/121 (40%), Positives = 77/121 (63%)
Frame = +3
Query: 168 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYV 347
MRE+I++ VG G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 348 PRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVI 527
PR++ +DL+P +D +R+G + LF P+ + G+ AANN+A+GHYT G EI+++ LD I
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 528 R 530
R
Sbjct: 120 R 120
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 108 bits (259), Expect = 3e-24
Identities = 50/123 (40%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
Frame = +3
Query: 171 REIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL---QLERINVYYNEASAGK 341
RE+I++ VG G QIG WE+ EHGI P G YH + D + E IN ++ E + GK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 342 YVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALD 521
+VPR + +DL+P +D VR+G + LF P+ + G+ AAN +A+G YT G E+++ +D
Sbjct: 67 HVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 126
Query: 522 VIR 530
++
Sbjct: 127 RVK 129
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 85.8 bits (203), Expect = 2e-17
Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Frame = +3
Query: 177 IINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRT 356
++ + VG CGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPR
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 357 VLIDLKPATMDAVRSGP-FGCLFRPDNFVYGQN--CAANNWAKGHYTEGVEILESALDVI 527
VL+DL+P ++ + P F LF DN + A NNWA G Y +G E+ E +D+I
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 85.8 bits (203), Expect = 2e-17
Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Frame = +3
Query: 177 IINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRT 356
++ + VG CGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPR
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 357 VLIDLKPATMDAVRSGP-FGCLFRPDNFVYGQN--CAANNWAKGHYTEGVEILESALDVI 527
VL+DL+P ++ + P F LF DN + A NNWA G Y +G E+ E +D+I
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 85.4 bits (202), Expect = 2e-17
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Frame = +3
Query: 246 EHGIDPSGCYHGDSDL---QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGC 416
EHGI P G YH + D + E IN ++ E + GK+VPR + +DL+P +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 417 LFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVIR 530
LF P+ + G+ AAN +A+G YT G E+++ +D ++
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVK 101
>AF038606-7|AAB92021.1| 344|Caenorhabditis elegans Hypothetical
protein C04C3.6 protein.
Length = 344
Score = 33.9 bits (74), Expect = 0.073
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Frame = -3
Query: 491 FSVVSLR-PVVGR---TVLSVDEIVRSE*ASEGSRPHRVHRGRLQVDKNRARNIFPSRCL 324
FSV+ +R P + T++S DEIV E E S VH+ ++ +D R RN RCL
Sbjct: 215 FSVLIMRNPCTSKNAFTLISADEIVHHESTDEKSPLKIVHKSKIMLDIRR-RNDAIRRCL 273
Query: 323 VVVHVDPFELQVGVAVVASAWIDAVLVRYHLPELSADLVSTRTDLEIDNFPHLVNL 156
++ V L + + + ID YH E S DL R + D +++ L
Sbjct: 274 LLATV---TLLLNLPNYSLQLIDEF---YHFRE-SEDLADRRRFVRADAIVYIIYL 322
>AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical
protein Y54E5A.4 protein.
Length = 538
Score = 30.7 bits (66), Expect = 0.68
Identities = 22/43 (51%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +1
Query: 208 TKSAESSGR*Y--LTSTASIQADATTATPTCNSKGST--CTTT 324
TK A S G + TSTA+ A ATT TPT + GST TTT
Sbjct: 476 TKPAFSGGSLFGATTSTATSSAAATTTTPTTSLFGSTKPATTT 518
>U41992-5|AAA83356.1| 549|Caenorhabditis elegans Hypothetical
protein F32E10.5 protein.
Length = 549
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 407 GSRPHRVHRGRLQVDKNRARNI-FPSRCLVVVHVDPFEL 294
G+ HR+ RG++ +N RNI + +RC + +PF++
Sbjct: 193 GAVIHRMDRGKVDQFQNMIRNIDYLARCQITTCTEPFQI 231
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 264 SGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS--GPFGCLFRPDNF 437
SGC GD + + Y+N+ + K++ + P +D V G F C P +F
Sbjct: 2078 SGCTSGDVIIIHKCTCAYHNDTFSDKFIYANTSL---PVGIDKVTRLVGRFVCEHGPSSF 2134
Query: 438 VYGQNCAAN 464
+ ++C+AN
Sbjct: 2135 LILEHCSAN 2143
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 264 SGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS--GPFGCLFRPDNF 437
SGC GD + + Y+N+ + K++ + P +D V G F C P +F
Sbjct: 2078 SGCTSGDVIIIHKCTCAYHNDTFSDKFIYANTSL---PVGIDKVTRLVGRFVCEHGPSSF 2134
Query: 438 VYGQNCAAN 464
+ ++C+AN
Sbjct: 2135 LILEHCSAN 2143
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 264 SGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS--GPFGCLFRPDNF 437
SGC GD + + Y+N+ + K++ + P +D V G F C P +F
Sbjct: 2078 SGCTSGDVIIIHKCTCAYHNDTFSDKFIYANTSL---PVGIDKVTRLVGRFVCEHGPSSF 2134
Query: 438 VYGQNCAAN 464
+ ++C+AN
Sbjct: 2135 LILEHCSAN 2143
>Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical
protein R13H4.2a protein.
Length = 225
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 187 SRSVLVETKSAESSGR*YLTSTASI 261
SRS LV ++S E S R Y+T T+S+
Sbjct: 13 SRSALVRSRSVEPSSRLYVTRTSSV 37
>Z81592-10|CAB04732.1| 240|Caenorhabditis elegans Hypothetical
protein T16G1.11 protein.
Length = 240
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 263 KRMLPRRLRPATRKDQRVLQRGIGWEICSSHGSYRLEAGHDG 388
K+ML R L A+ K+ L + GWE +G A H+G
Sbjct: 171 KKMLSRLLGGASDKEVTALAQSFGWE-AKENGDVFFVANHEG 211
>AY731377-1|AAW63419.1| 240|Caenorhabditis elegans eukaryotic
initiation factor eIF-3.K protein.
Length = 240
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 263 KRMLPRRLRPATRKDQRVLQRGIGWEICSSHGSYRLEAGHDG 388
K+ML R L A+ K+ L + GWE +G A H+G
Sbjct: 171 KKMLSRLLGGASDKEVTALAQSFGWE-AKENGDVFFVANHEG 211
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 339 KYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNF 437
KY P T L+DL+P + AV + F +F F
Sbjct: 1287 KYPPPTELLDLQPLPISAVTNKEFQTVFAESGF 1319
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.9 bits (59), Expect = 4.8
Identities = 22/80 (27%), Positives = 31/80 (38%)
Frame = +1
Query: 247 STASIQADATTATPTCNSKGSTCTTTRHRLGNMFLARFLST*SRPRWTR*GRDPSDAYSD 426
+T + TT TPT + T TTT +T + P T P+ +
Sbjct: 190 TTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTT--TTPTTTTTP 247
Query: 427 RTISSTDKTVRPTTGRRDTT 486
T +S T PTT + TT
Sbjct: 248 ATTTSETTTTTPTTTTQTTT 267
Score = 27.5 bits (58), Expect = 6.3
Identities = 23/85 (27%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Frame = +1
Query: 244 TSTASIQADATTATPTCNSKGSTCTTTRHRLGNMFLARFLST*SRP----RWTR*GRDPS 411
T+T S T TPT + T TTT T + P T P+
Sbjct: 67 TTTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPT 126
Query: 412 DAYSDRTISSTDKTVRPTTGRRDTT 486
+ T ++T+ T PTT +TT
Sbjct: 127 TTTTTPTTTTTETTTTPTTTTTETT 151
>U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical
protein F10G2.3 protein.
Length = 417
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +1
Query: 265 ADATTATPTCNSKGSTCTTTRHRLGNMFLARFLST*SRPRWTR---*GRDPSDAYSDRTI 435
A+ + A TC G+T T ++ N ++ F T + W G DPS D +
Sbjct: 44 ANHSAAEKTCRKYGATLVTVKNENDNHAISTFAGTSASLLWIGLYCFGNDPSKCLWDDST 103
Query: 436 SSTD 447
S D
Sbjct: 104 GSAD 107
>U42839-4|AAM54197.1| 114|Caenorhabditis elegans Hypothetical
protein F11C7.7 protein.
Length = 114
Score = 27.9 bits (59), Expect = 4.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 486 CSVPSPSCWPHSFVRRRNCP 427
C PSPSC PH++ + + P
Sbjct: 86 CMAPSPSCCPHTYKKTVDIP 105
>U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical
protein K11G12.6a protein.
Length = 503
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 335 WEICSSHGSYRLEAGHDGRGEV 400
W + +S+GSYR G GR E+
Sbjct: 290 WSVANSYGSYRQMTGTHGRPEI 311
>U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical
protein K11G12.6b protein.
Length = 766
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 335 WEICSSHGSYRLEAGHDGRGEV 400
W + +S+GSYR G GR E+
Sbjct: 553 WSVANSYGSYRQMTGTHGRPEI 574
>U00035-2|AAA50644.2| 413|Caenorhabditis elegans Hypothetical
protein R01H2.2 protein.
Length = 413
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 238 YLTSTASIQADATTATPTCNSKGSTCTTTRHRL 336
YLT+ I + +TT TPT + +T TT ++
Sbjct: 293 YLTNICDIYSPSTTTTPTTTTPTTTTPTTTTKI 325
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 244 TSTASIQADATTATPTCNSKGSTCTTT 324
T+T S + TT TPT + +T TTT
Sbjct: 88 TTTTSTTSTTTTTTPTTTTSTTTTTTT 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,861,235
Number of Sequences: 27780
Number of extensions: 242294
Number of successful extensions: 801
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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