Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12h18
         (550 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022622-1|AAY55038.1|  122|Drosophila melanogaster IP06943p pro...    29   5.5  
DQ494533-1|ABF29833.1| 2445|Drosophila melanogaster leucine-rich...    28   7.2  
BT023932-1|ABB36436.1|  836|Drosophila melanogaster RE53394p pro...    28   7.2  
AE014297-2835|AAF55793.2| 2351|Drosophila melanogaster CG5483-PA...    28   7.2  
AE014296-193|AAF47454.1|  836|Drosophila melanogaster CG13913-PA...    28   7.2  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    28   7.2  

>BT022622-1|AAY55038.1|  122|Drosophila melanogaster IP06943p
           protein.
          Length = 122

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 440 HRSGSEHSSNLHGRNTHWGRKLNHARLQPMC 532
           HR G + SS    R+ HW      +  QP C
Sbjct: 33  HRRGHDDSSGFKVRHEHWAHMQGQSNAQPGC 63


>DQ494533-1|ABF29833.1| 2445|Drosophila melanogaster leucine-rich
            repeat kinase protein.
          Length = 2445

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = +2

Query: 425  VDCISHRSGSEHSSNLH---GRNTHWGRKLNHARLQPMCHSRSHR 550
            +D +   +GS  SS+ H       HW +++ HAR      SRSHR
Sbjct: 942  LDLLRQGAGSGSSSSSHRSRASENHWAKRMGHAR----STSRSHR 982


>BT023932-1|ABB36436.1|  836|Drosophila melanogaster RE53394p
           protein.
          Length = 836

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = -2

Query: 336 KRTMKCKAQEVHSQLALILHSGSQINVPPRTMARTQDSMP---NTDEKIHILRKII 178
           K T KC A  ++  LA     GS+ + P   +   ++  P   N ++ +H LRK I
Sbjct: 29  KGTNKCGASSLNGSLASYKIGGSEQSWPQAPVYSKENQRPPVYNPEDYVHSLRKFI 84


>AE014297-2835|AAF55793.2| 2351|Drosophila melanogaster CG5483-PA
            protein.
          Length = 2351

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = +2

Query: 425  VDCISHRSGSEHSSNLH---GRNTHWGRKLNHARLQPMCHSRSHR 550
            +D +   +GS  SS+ H       HW +++ HAR      SRSHR
Sbjct: 942  LDLLRQGAGSGSSSSSHRSRASENHWAKRMGHAR----STSRSHR 982


>AE014296-193|AAF47454.1|  836|Drosophila melanogaster CG13913-PA
           protein.
          Length = 836

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = -2

Query: 336 KRTMKCKAQEVHSQLALILHSGSQINVPPRTMARTQDSMP---NTDEKIHILRKII 178
           K T KC A  ++  LA     GS+ + P   +   ++  P   N ++ +H LRK I
Sbjct: 29  KGTNKCGASSLNGSLASYKIGGSEQSWPQAPVYSKENQRPPVYNPEDYVHSLRKFI 84


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +2

Query: 170   PQPIIFRRICIFSSVLGIESCVRAIVLGGTFICEPECRIRASC 298
             P P      C  ++ L + SC+   + G    C+PEC + A C
Sbjct: 12307 PSPCGANSKCRVANGLAVCSCMETFI-GAPPNCKPECTVNAEC 12348


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,315,535
Number of Sequences: 53049
Number of extensions: 508770
Number of successful extensions: 1166
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)