Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12h07
         (703 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001118-1|AAH01118.1|  224|Homo sapiens transmembrane protein 1...   210   4e-54
Y18007-1|CAA77013.1|  224|Homo sapiens seven transmembrane domai...   198   1e-50
DQ644568-1|ABG29111.1|  203|Homo sapiens sigma-1 splice variant ...    33   0.99 
BC057784-1|AAH57784.1|  519|Homo sapiens FLJ14803 protein protein.     31   3.0  
BC045618-1|AAH45618.1|  561|Homo sapiens FLJ14803 protein protein.     31   3.0  
AK074732-1|BAC11168.1|  561|Homo sapiens protein ( Homo sapiens ...    31   3.0  
AK027709-1|BAB55314.1|  561|Homo sapiens protein ( Homo sapiens ...    31   3.0  
AK027678-1|BAB55289.1|  203|Homo sapiens protein ( Homo sapiens ...    31   3.0  

>BC001118-1|AAH01118.1|  224|Homo sapiens transmembrane protein 147
           protein.
          Length = 224

 Score =  210 bits (513), Expect = 4e-54
 Identities = 97/207 (46%), Positives = 138/207 (66%)
 Frame = +1

Query: 73  MTLYHFGNCLALIYAPYHMAYKYSGISEYASFSKCVYAGGLYIFTQLCKMLLLATFFPDS 252
           MTL+HFGNC AL Y PY + YK SG+SEY +F KCV AG  Y+F QLCKML LATFFP  
Sbjct: 1   MTLFHFGNCFALAYFPYFITYKCSGLSEYNAFWKCVQAGVTYLFVQLCKMLFLATFFPTW 60

Query: 253 DSSPVEGEYNVILEILKSTVDFADLLGIYFALNSVPGKGHAKILTSAIGWASAELVVTRT 432
           +     G Y+ I E +K++VD ADL+G+   ++   GKG  KI+ +A+GWA+AEL+++R 
Sbjct: 61  EG----GIYDFIGEFMKASVDVADLIGLNLVMSRNAGKGEYKIMVAALGWATAELIMSRC 116

Query: 433 VLLWVGARGSEFDWRYVRSCAESNVALIQHAATATLVWLWTRSDLPKKHSPIVVSLLALT 612
           + LWVGARG EFDW+Y++   +SN++L+ +   +  VW+ TR DL     P V+ L+ L+
Sbjct: 117 IPLWVGARGIEFDWKYIQMSIDSNISLVHYIVASAQVWMITRYDLYHTFRPAVLLLMFLS 176

Query: 613 PYRALIEEAIGSIFPLCAWALVAVRAI 693
            Y+A + E    +  L +WA +  RA+
Sbjct: 177 VYKAFVMETFVHLCSLGSWAALLARAV 203


>Y18007-1|CAA77013.1|  224|Homo sapiens seven transmembrane domain
           protein protein.
          Length = 224

 Score =  198 bits (484), Expect = 1e-50
 Identities = 93/202 (46%), Positives = 133/202 (65%)
 Frame = +1

Query: 73  MTLYHFGNCLALIYAPYHMAYKYSGISEYASFSKCVYAGGLYIFTQLCKMLLLATFFPDS 252
           MTL+HFGNC AL Y PY + YK + +SEY +F KCV AG  Y+F QLCKML LATFFP  
Sbjct: 1   MTLFHFGNCFALAYFPYFITYKCTDLSEYNAFWKCVQAGVTYLFVQLCKMLFLATFFPTW 60

Query: 253 DSSPVEGEYNVILEILKSTVDFADLLGIYFALNSVPGKGHAKILTSAIGWASAELVVTRT 432
           +     G Y+ I E +K++VD ADL+G+   ++   GKG  KI+ +A+GWA+AEL+++R 
Sbjct: 61  EG----GIYDFIGEFMKASVDVADLIGLNLVMSRNAGKGEYKIMVAALGWATAELIMSRC 116

Query: 433 VLLWVGARGSEFDWRYVRSCAESNVALIQHAATATLVWLWTRSDLPKKHSPIVVSLLALT 612
           + LWVGARG EFDW+Y++   +SN++L  +   +  VW+ TR DL     P V+ L+ L 
Sbjct: 117 IPLWVGARGIEFDWKYIQMSIDSNISLGPYIVASAQVWMITRYDLYHTFRPAVLLLMFLR 176

Query: 613 PYRALIEEAIGSIFPLCAWALV 678
            Y+A + E    +  L +WA++
Sbjct: 177 VYKAFVMETFVHLCSLGSWAVL 198


>DQ644568-1|ABG29111.1|  203|Homo sapiens sigma-1 splice variant
           protein.
          Length = 203

 Score = 33.1 bits (72), Expect = 0.99
 Identities = 22/77 (28%), Positives = 33/77 (42%)
 Frame = +1

Query: 472 WRYVRSCAESNVALIQHAATATLVWLWTRSDLPKKHSPIVVSLLALTPYRALIEEAIGSI 651
           W   R  A + + L   A    +VWLW   D     S ++V L  L P   L +E +  +
Sbjct: 3   WAVGRRWAWAALLLAVAAVLTQVVWLWLGLDHELAFSRLIVELRRLHPGHVLPDEELQWV 62

Query: 652 FPLCAWALVAVRAIHAS 702
           F      + A+  +HAS
Sbjct: 63  FVNAGGWMGAMCLLHAS 79


>BC057784-1|AAH57784.1|  519|Homo sapiens FLJ14803 protein protein.
          Length = 519

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -3

Query: 338 YMPSRSAKSTVDFSISKITLYSPSTGLLSESGKNVANSSILQS*VKIYN 192
           Y PSRS  ++  F+ S +T YSP    LS  G    +  +  S V  YN
Sbjct: 142 YSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGSYSPGVTYSPVSGYN 190


>BC045618-1|AAH45618.1|  561|Homo sapiens FLJ14803 protein protein.
          Length = 561

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -3

Query: 338 YMPSRSAKSTVDFSISKITLYSPSTGLLSESGKNVANSSILQS*VKIYN 192
           Y PSRS  ++  F+ S +T YSP    LS  G    +  +  S V  YN
Sbjct: 142 YSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGSYSPGVTYSPVSGYN 190


>AK074732-1|BAC11168.1|  561|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90251 fis, clone NT2RM4000115. ).
          Length = 561

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -3

Query: 338 YMPSRSAKSTVDFSISKITLYSPSTGLLSESGKNVANSSILQS*VKIYN 192
           Y PSRS  ++  F+ S +T YSP    LS  G    +  +  S V  YN
Sbjct: 142 YSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGSYSPGVTYSPVSGYN 190


>AK027709-1|BAB55314.1|  561|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14803 fis, clone NT2RP4001442. ).
          Length = 561

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -3

Query: 338 YMPSRSAKSTVDFSISKITLYSPSTGLLSESGKNVANSSILQS*VKIYN 192
           Y PSRS  ++  F+ S +T YSP    LS  G    +  +  S V  YN
Sbjct: 142 YSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGSYSPGVTYSPVSGYN 190


>AK027678-1|BAB55289.1|  203|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14772 fis, clone NT2RP3004332. ).
          Length = 203

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -3

Query: 338 YMPSRSAKSTVDFSISKITLYSPSTGLLSESGKNVANSSILQS*VKIYN 192
           Y PSRS  ++  F+ S +T YSP    LS  G    +  +  S V  YN
Sbjct: 142 YSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGSYSPGVTYSPVSGYN 190


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,447,480
Number of Sequences: 237096
Number of extensions: 2383281
Number of successful extensions: 8834
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8832
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)