BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12h07
(703 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071295-1|AAL48917.1| 227|Drosophila melanogaster RE32624p pro... 249 2e-66
AE014134-2694|AAF53519.1| 227|Drosophila melanogaster CG5861-PA... 249 2e-66
BT025178-1|ABE98144.1| 1883|Drosophila melanogaster LD46479p pro... 29 6.1
AY060443-1|AAL25482.1| 632|Drosophila melanogaster LD47460p pro... 29 6.1
AY051999-1|AAK93423.1| 806|Drosophila melanogaster LD46585p pro... 29 6.1
AE014298-2429|AAF48628.3| 1905|Drosophila melanogaster CG4453-PA... 29 6.1
AE014298-843|AAF46122.1| 1624|Drosophila melanogaster CG4320-PA ... 29 8.1
AE013599-61|ABI31024.1| 89|Drosophila melanogaster CG41443-PA ... 29 8.1
>AY071295-1|AAL48917.1| 227|Drosophila melanogaster RE32624p
protein.
Length = 227
Score = 249 bits (610), Expect = 2e-66
Identities = 114/210 (54%), Positives = 155/210 (73%)
Frame = +1
Query: 73 MTLYHFGNCLALIYAPYHMAYKYSGISEYASFSKCVYAGGLYIFTQLCKMLLLATFFPDS 252
MTLYHFGNC+AL+ PY+ YKYSG+SEY +F KCV AGG+YIFTQL KML+LATFF S
Sbjct: 1 MTLYHFGNCVALL-TPYYFTYKYSGLSEYGAFWKCVQAGGIYIFTQLVKMLVLATFFY-S 58
Query: 253 DSSPVEGEYNVILEILKSTVDFADLLGIYFALNSVPGKGHAKILTSAIGWASAELVVTRT 432
D+ GE+N EIL+ ++D ADLLG L+ +PGKGH+K++T+ +GWA+AE++++R
Sbjct: 59 DAPSSSGEFNFFAEILRCSMDIADLLGFALILSRIPGKGHSKLITAGLGWATAEVILSRG 118
Query: 433 VLLWVGARGSEFDWRYVRSCAESNVALIQHAATATLVWLWTRSDLPKKHSPIVVSLLALT 612
++LWVGARG+EF W Y+ C ESNV L+QH TATL+WL+TR DL K P+V LLA+T
Sbjct: 119 IMLWVGARGTEFSWIYILKCLESNVLLVQHITTATLIWLFTRHDLNKALKPLVSLLLAVT 178
Query: 613 PYRALIEEAIGSIFPLCAWALVAVRAIHAS 702
++ + E + I + W VAV+A+ A+
Sbjct: 179 VFKGVWLEGMLHILTIGPWLTVAVKALVAA 208
>AE014134-2694|AAF53519.1| 227|Drosophila melanogaster CG5861-PA
protein.
Length = 227
Score = 249 bits (610), Expect = 2e-66
Identities = 114/210 (54%), Positives = 155/210 (73%)
Frame = +1
Query: 73 MTLYHFGNCLALIYAPYHMAYKYSGISEYASFSKCVYAGGLYIFTQLCKMLLLATFFPDS 252
MTLYHFGNC+AL+ PY+ YKYSG+SEY +F KCV AGG+YIFTQL KML+LATFF S
Sbjct: 1 MTLYHFGNCVALL-TPYYFTYKYSGLSEYGAFWKCVQAGGIYIFTQLVKMLVLATFFY-S 58
Query: 253 DSSPVEGEYNVILEILKSTVDFADLLGIYFALNSVPGKGHAKILTSAIGWASAELVVTRT 432
D+ GE+N EIL+ ++D ADLLG L+ +PGKGH+K++T+ +GWA+AE++++R
Sbjct: 59 DAPSSSGEFNFFAEILRCSMDIADLLGFALILSRIPGKGHSKLITAGLGWATAEVILSRG 118
Query: 433 VLLWVGARGSEFDWRYVRSCAESNVALIQHAATATLVWLWTRSDLPKKHSPIVVSLLALT 612
++LWVGARG+EF W Y+ C ESNV L+QH TATL+WL+TR DL K P+V LLA+T
Sbjct: 119 IMLWVGARGTEFSWIYILKCLESNVLLVQHITTATLIWLFTRHDLNKALKPLVSLLLAVT 178
Query: 613 PYRALIEEAIGSIFPLCAWALVAVRAIHAS 702
++ + E + I + W VAV+A+ A+
Sbjct: 179 VFKGVWLEGMLHILTIGPWLTVAVKALVAA 208
>BT025178-1|ABE98144.1| 1883|Drosophila melanogaster LD46479p protein.
Length = 1883
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = -3
Query: 452 APTQSNTVRVTTNSALAHPIADVRILAWPLPGTEFNAKYMPSRS-AKS-TVDFSISKITL 279
AP+ S+TV +T S A+P A + +W G+ ++ + AK+ T+ F +S T+
Sbjct: 1417 APSSSSTVSSSTTSTSANPAAVKPMFSWSGAGSAVSSTSSSQQPVAKAPTLGFGVSSSTV 1476
Query: 278 YSPST 264
+ +T
Sbjct: 1477 TTTTT 1481
>AY060443-1|AAL25482.1| 632|Drosophila melanogaster LD47460p
protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = -3
Query: 452 APTQSNTVRVTTNSALAHPIADVRILAWPLPGTEFNAKYMPSRS-AKS-TVDFSISKITL 279
AP+ S+TV +T S A+P A + +W G+ ++ + AK+ T+ F +S T+
Sbjct: 166 APSSSSTVSSSTTSTSANPAAVKPMFSWSGAGSAVSSTSSSQQPVAKAPTLGFGVSSSTV 225
Query: 278 YSPST 264
+ +T
Sbjct: 226 TTTTT 230
>AY051999-1|AAK93423.1| 806|Drosophila melanogaster LD46585p
protein.
Length = 806
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = -3
Query: 452 APTQSNTVRVTTNSALAHPIADVRILAWPLPGTEFNAKYMPSRS-AKS-TVDFSISKITL 279
AP+ S+TV +T S A+P A + +W G+ ++ + AK+ T+ F +S T+
Sbjct: 340 APSSSSTVSSSTTSTSANPAAVKPMFSWSGAGSAVSSTSSSQQPVAKAPTLGFGVSSSTV 399
Query: 278 YSPST 264
+ +T
Sbjct: 400 TTTTT 404
>AE014298-2429|AAF48628.3| 1905|Drosophila melanogaster CG4453-PA
protein.
Length = 1905
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = -3
Query: 452 APTQSNTVRVTTNSALAHPIADVRILAWPLPGTEFNAKYMPSRS-AKS-TVDFSISKITL 279
AP+ S+TV +T S A+P A + +W G+ ++ + AK+ T+ F +S T+
Sbjct: 1439 APSSSSTVSSSTTSTSANPAAVKPMFSWSGAGSAVSSTSSSQQPVAKAPTLGFGVSSSTV 1498
Query: 278 YSPST 264
+ +T
Sbjct: 1499 TTTTT 1503
>AE014298-843|AAF46122.1| 1624|Drosophila melanogaster CG4320-PA
protein.
Length = 1624
Score = 28.7 bits (61), Expect = 8.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 517 QHAATATLVWLWTRSD--LPKKHSPIVVSLLALTPYRALIEEAIGSIFPLCAWAL 675
+H TA VWL + S+ P + PIV+ +L +R E + L WA+
Sbjct: 589 EHQLTAFQVWLDSESESRTPPEQLPIVLQVLLSQVHRLRALELLARFLDLGPWAV 643
>AE013599-61|ABI31024.1| 89|Drosophila melanogaster CG41443-PA
protein.
Length = 89
Score = 28.7 bits (61), Expect = 8.1
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +1
Query: 187 GGLYIFTQLCKMLLLATFFPDSDSSPVEGEYNVIL----EILKSTVDFADLLGIYFALNS 354
G +YI+ K+ + F P S S V+ + ++ L EI S+ DL + L S
Sbjct: 20 GIIYIYEIRKKLATICLFMPSSVCSDVDVDVDLWLEKGCEISSSSDKLTDLDDLSVRLTS 79
Query: 355 VPGKGHAKI 381
VP G +I
Sbjct: 80 VPSDGSGRI 88
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,695,101
Number of Sequences: 53049
Number of extensions: 686589
Number of successful extensions: 1626
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1622
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -