Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12g12
(581 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 32 0.053
SPAC17C9.14 |||Pex19 protein family|Schizosaccharomyces pombe|ch... 30 0.21
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.37
SPCC338.08 |ctp1|mug38|sequence orphan|Schizosaccharomyces pombe... 29 0.50
SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr 1|||M... 29 0.65
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 1.1
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 1.5
SPAC6F6.04c |||membrane transporter |Schizosaccharomyces pombe|c... 27 1.5
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 27 2.0
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.0
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 27 2.6
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 26 3.5
SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr 2|||Ma... 26 3.5
SPAC30D11.06c |||DUF300 family protein|Schizosaccharomyces pombe... 26 3.5
SPBC215.08c |arg4||carbamoyl-phosphate synthase Arg4|Schizosacch... 26 3.5
SPBC8D2.01 |gsk31||serine/threonine protein kinase Gsk31|Schizos... 26 4.6
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce... 26 4.6
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 26 4.6
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 25 8.1
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 25 8.1
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 25 8.1
SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces pombe... 25 8.1
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 32.3 bits (70), Expect = 0.053
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 3/145 (2%)
Frame = -1
Query: 578 SNLLPHTESCVLLQSSSAQFKDLILSFLVSVPCLLVSALVVFSMSSLFFAFINNTSFGAS 399
S+ L S + SSS +I S + SV L S+ + S SS F + I S G S
Sbjct: 508 SSTLLSGSSAIPSTSSSTPSSSIISSPMTSV--LSSSSSIPTSSSSDFSSSITTISSGIS 565
Query: 398 VSKLTF*RSKKSPIVFFVIISSMLNLSTFRSALFGTNITSSVTFGASVASP---TFGVSL 228
S + S S I +SS + + S ++ TSS AS +SP + +S
Sbjct: 566 SSSIPSTFSSVSSI-----LSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISS 620
Query: 227 TSVIAFSLTSACPSYVTKTSELFFG 153
+S I S T + S + +S + G
Sbjct: 621 SSTILSSPTPSTSSLMISSSSIISG 645
>SPAC17C9.14 |||Pex19 protein family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 232
Score = 30.3 bits (65), Expect = 0.21
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +1
Query: 181 TYEGHAEVNEKAMTDVKLTPNVGDATDAPNVTDDVIFVPNSAERNVDRFNIDE 339
T EG + N K T PN D D ++ DD + VP SA +N ++ NIDE
Sbjct: 5 TIEG--DENRKENTKSNTKPNFDDLDDLDDILDD-LDVP-SAFKNEEKKNIDE 53
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.5 bits (63), Expect = 0.37
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = -1
Query: 452 SMSSLFFAFINNT-SFGASVSKLTF*RSKKSPIVFFVIISSMLNLSTFRSALFGTNITSS 276
S SSL + N+T S + S LT + S + SS L S+ S+ + SS
Sbjct: 87 SSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLAS---SS 143
Query: 275 VTFGASVASPTFGVSLTSVIAFSLTSACPSYVTKTSEL 162
+T + +S T SL S S TSA P+ +S L
Sbjct: 144 ITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSL 181
>SPCC338.08 |ctp1|mug38|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 29.1 bits (62), Expect = 0.50
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +1
Query: 343 ITKKTIGDFLERQNVNFETEAPKDVLFIKAKNNEDIEKTTKAETRRHGTDTRKLKIKSLN 522
I + +G+ LE+ V E K L ++ K +EK ++ + + + K+ S
Sbjct: 14 IVYRQLGNLLEQYEV--EIARLKSQLVLEKKLRIQVEKELESVKTKQISSSASSKVSSNT 71
Query: 523 CAELDCNNTQDSVCGS 570
ELD +D + GS
Sbjct: 72 IQELDSTTDEDEIPGS 87
>SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 274
Score = 28.7 bits (61), Expect = 0.65
Identities = 30/99 (30%), Positives = 41/99 (41%)
Frame = +1
Query: 250 DATDAPNVTDDVIFVPNSAERNVDRFNIDEIITKKTIGDFLERQNVNFETEAPKDVLFIK 429
D D +T V + +S+E VD +E KK I + L+ NV +TE P + K
Sbjct: 100 DEIDFQLITSKVTKLIDSSEIEVDAEPKEE--NKKEIPEKLK--NVKVDTENPSAEPYTK 155
Query: 430 AKNNEDIEKTTKAETRRHGTDTRKLKIKSLNCAELDCNN 546
AK + K K +R R S L CNN
Sbjct: 156 AKGDVSFLKFQKRLSRAPDQIMRYYHATSNEFPGLWCNN 194
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.9 bits (59), Expect = 1.1
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Frame = -1
Query: 503 SFLVSVPCLLVSALVVFSMSSLFFAFINNTSFGASVSKLTF*RSKKSPIVFFVIISSMLN 324
S +V+ + S+ V+ S +++ + I N+S + S + + +PI +I+S +
Sbjct: 3435 STVVNSSTPITSSSVLNSSTAIASSSILNSSTPITSSSVL---NSSTPISSSTVITSSVV 3491
Query: 323 LSTFRSALFGTNITSSVTFGASVASPTFGVS----LTSVIAFSLTS 198
+ + + ++I SSV+ +S+ S + G S T +FSLTS
Sbjct: 3492 IGSSSVLSYASSIVSSVSLNSSLLSSSGGFSSSAFSTGSSSFSLTS 3537
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 27.5 bits (58), Expect = 1.5
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = -1
Query: 338 SSMLNLSTFRSALFGTNITSSVTFGASVASPTFGVSLTSVIAFSLTSACPSYVTKTS 168
SS L+ S+F S + ITS V+ +S S + SLTS + +LTS+ + T +S
Sbjct: 63 SSPLSSSSFTSPASSSFITSLVS-SSSQQSSSSSASLTSSSSATLTSSSSASPTSSS 118
>SPAC6F6.04c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 489
Score = 27.5 bits (58), Expect = 1.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 299 FGTNITSSVTFGASVASPTFGVSLTSVIAFSLTSAC 192
FG+ + S + FG + S + GV + I F + AC
Sbjct: 162 FGSTVGSFIAFGINYHSTSTGVPMAVYIIFIIIMAC 197
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 326 NLSTFRSALFGTNITSSVTFGASVASPTFG 237
N +T + LFG+ TS+ FG + P FG
Sbjct: 31 NSNTPGNTLFGSQNTSTTGFGQNTTQPLFG 60
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 27.1 bits (57), Expect = 2.0
Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 3/128 (2%)
Frame = +1
Query: 196 AEVNEKAMTDVKLTPNVGDATDAPNVTDDVIFVPNSAERNVDRFNIDEIITKKTIGDFLE 375
++V+++ T L N ++ VT+D F + N D I + +I D
Sbjct: 538 SDVDDEVATIRSLKQNNATNSEVETVTNDPSFSQQPGTHSRILRNFDAISSIDSIPDSFS 597
Query: 376 RQNVNFETEAPKDVLFIKAKNNEDIEKTTKAETRRHGTDTRKLKIK---SLNCAELDCNN 546
V+ ++ K L K ++N ++ + AE ++ K+ +K S N E
Sbjct: 598 DSAVDLPVDSSKYTLVGKTQSNSNLLQ-DNAEKHISKSNLEKVDVKGDTSPNSVEQGIEP 656
Query: 547 TQDSVCGS 570
SV GS
Sbjct: 657 QAASVVGS 664
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 26.6 bits (56), Expect = 2.6
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 430 AKNNEDIEKTTKAETRRHGTDTRKLKIKSLNCAELDC 540
A N ++ K T +++H D L++ ++C +DC
Sbjct: 451 AYNYQNDPKATLGFSKKHSVDLSSLRMCMVDCLNVDC 487
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 26.2 bits (55), Expect = 3.5
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +1
Query: 235 TPNVGDATDAPNVTDDVIFVPN--SAERNVDRFNIDEII--TKK 354
TPN+ + + ++T+ +F+PN S N R N E + TKK
Sbjct: 9 TPNLPNLIHSESITNSPVFIPNLRSKSDNKHRLNTSEELPFTKK 52
>SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr
2|||Manual
Length = 918
Score = 26.2 bits (55), Expect = 3.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 260 SVASPTFGVSLTSVIAFSLTSACPSYVTKTSE 165
S SP F S S +AF L SYVT E
Sbjct: 565 SEMSPLFACSTYSALAFILLQVISSYVTNCRE 596
>SPAC30D11.06c |||DUF300 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 426
Score = 26.2 bits (55), Expect = 3.5
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -3
Query: 546 VIAVQLRTVQG-FDFEFSRISAMSSGFRFGCFFNVFIVFRLYKQYIFW 406
VIAV L V G +D E + A S+ G +N+ I LY FW
Sbjct: 145 VIAVLLTKVTGVYDREDQPVYA-SADLWIGLVYNISITLSLYSLTTFW 191
>SPBC215.08c |arg4||carbamoyl-phosphate synthase
Arg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1160
Score = 26.2 bits (55), Expect = 3.5
Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +1
Query: 202 VNEKAMTDVKLTPNVGDATDAPNVTDDVIFVPNSAE---RNVDRFNIDEII 345
+ E ++ + + PN+ + ++ D++ F+P +AE ++R N D I+
Sbjct: 116 LRESSVHTILINPNIATIQSSHSLADEIYFLPVTAEYLTHLIERENPDGIL 166
>SPBC8D2.01 |gsk31||serine/threonine protein kinase
Gsk31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 381
Score = 25.8 bits (54), Expect = 4.6
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 575 NLLPHTESCVLLQSSSAQFKDLILSFLVSVPCLLVSALVVFS 450
N+ PHT V+ + + DL+ L VP +SA+ V +
Sbjct: 264 NVRPHTLESVMPHNCTKNAMDLLHKMLTYVPSKRISAIEVLT 305
>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 906
Score = 25.8 bits (54), Expect = 4.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 445 DIEKTTKAETRRHGTDTRKLKIKSLNC 525
DIE+ K R HG D ++L I LNC
Sbjct: 748 DIERALKM-VRVHGPDQQELYIMMLNC 773
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 25.8 bits (54), Expect = 4.6
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -1
Query: 320 STFRSALFGTNITSSVTFGASVASPTFGVSLTSVIAFSLTSACPSYV 180
+TF + F T++TS ++ PT V + + +F++T+ S V
Sbjct: 176 TTFTTGYFNTSVTSVAVHNSTTVFPT-SVPIVNTTSFNVTTIPSSAV 221
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 25.0 bits (52), Expect = 8.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 341 ISSMLNLSTFRSALFGTNITSSVTFGASVASP 246
IS+ + S +R AL I + FGA ++SP
Sbjct: 47 ISNSYSYSAWRQALLTGTINAGCLFGAMLSSP 78
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 25.0 bits (52), Expect = 8.1
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Frame = +1
Query: 160 NNSDVFVTYEGHAEVNEKAMTDVKLTPNVGDATDAPNVTDDVIFVPNSAERNVDRFNIDE 339
N + + + +GH+ NE + + KL+P+ DA D +F ++A V D+
Sbjct: 139 NINAITIDVDGHSLQNEISSSTDKLSPSQSDALFEQK--QDSLFWNDNAVIVVSDSESDD 196
Query: 340 --IITKKTIGDFLERQNVNFETEAPKDVLFIKAKNNE 444
+ TK ++ D VN + + ++ F+ +K +
Sbjct: 197 NNVRTKSSLND---HDKVNMKEKRNLELAFMNSKRKK 230
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 25.0 bits (52), Expect = 8.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 176 KTSELFFGMWHRESNIKNGMKTIVGIKTNL 87
+ +EL +W R SNIK+ + +V + T +
Sbjct: 696 RLNELANKLWQRNSNIKSKCRRVVSLCTGV 725
>SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 319
Score = 25.0 bits (52), Expect = 8.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 451 EKTTKAETRRHGTDTRKLKIKSLNCAELDCNN 546
E + K R+ + R+ KIKSL C L CNN
Sbjct: 73 ENSLKRVLRQQQKERREGKIKSLQC--LFCNN 102
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,338,303
Number of Sequences: 5004
Number of extensions: 48974
Number of successful extensions: 176
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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