Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12g12
(581 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74739-3|CAA98995.2| 3085|Homo sapiens 214K23.1 (breast cancer 2... 34 0.32
X95152-1|CAA64484.1| 3418|Homo sapiens brca2 protein. 34 0.32
U43746-1|AAB07223.1| 3418|Homo sapiens BRCA2 protein. 34 0.32
DQ897648-1|ABI74674.1| 2649|Homo sapiens breast and ovarian canc... 34 0.32
AY436640-1|AAQ97181.1| 3418|Homo sapiens breast cancer 2, early ... 34 0.32
AL445212-4|CAI40479.1| 3418|Homo sapiens breast cancer 2, early ... 34 0.32
AL137247-6|CAI13195.1| 3418|Homo sapiens breast cancer 2, early ... 34 0.32
BC093088-1|AAH93088.1| 294|Homo sapiens LRRIQ1 protein protein. 32 1.7
BC005399-1|AAH05399.1| 240|Homo sapiens LRRIQ1 protein protein. 32 1.7
AF348515-1|AAK29432.1| 715|Homo sapiens mutant early onset brea... 32 1.7
BC130466-1|AAI30467.1| 1137|Homo sapiens adaptor-related protein... 31 2.2
BC126308-1|AAI26309.1| 1137|Homo sapiens adaptor-related protein... 31 2.2
AF155156-1|AAD43326.2| 1135|Homo sapiens adaptor-related protein... 31 2.2
AB030653-1|BAA82969.1| 1137|Homo sapiens epsilon-adaptin protein. 31 2.2
>Z74739-3|CAA98995.2| 3085|Homo sapiens 214K23.1 (breast cancer 2,
early onset, protein) protein.
Length = 3085
Score = 34.3 bits (75), Expect = 0.32
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +1
Query: 211 KAMTDVKLTPNVGDATDAPNVTDDVIFVPNSAERNVDRFNIDEIITKKTIGDFLERQNVN 390
+A D++L + T AP + + NS + + +I+ ++ K + D L RQ N
Sbjct: 1571 EACKDLELACETIEITAAPKCKE----MQNSLNNDKNLVSIETVVPPKLLSDNLCRQTEN 1626
Query: 391 FETEAPKDVLFIKAKNNEDIEKTT 462
+T +F+K K +E++EK T
Sbjct: 1627 LKTSKS---IFLKVKVHENVEKET 1647
>X95152-1|CAA64484.1| 3418|Homo sapiens brca2 protein.
Length = 3418
Score = 34.3 bits (75), Expect = 0.32
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +1
Query: 211 KAMTDVKLTPNVGDATDAPNVTDDVIFVPNSAERNVDRFNIDEIITKKTIGDFLERQNVN 390
+A D++L + T AP + + NS + + +I+ ++ K + D L RQ N
Sbjct: 1571 EACKDLELACETIEITAAPKCKE----MQNSLNNDKNLVSIETVVPPKLLSDNLCRQTEN 1626
Query: 391 FETEAPKDVLFIKAKNNEDIEKTT 462
+T +F+K K +E++EK T
Sbjct: 1627 LKTSKS---IFLKVKVHENVEKET 1647
>U43746-1|AAB07223.1| 3418|Homo sapiens BRCA2 protein.
Length = 3418
Score = 34.3 bits (75), Expect = 0.32
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +1
Query: 211 KAMTDVKLTPNVGDATDAPNVTDDVIFVPNSAERNVDRFNIDEIITKKTIGDFLERQNVN 390
+A D++L + T AP + + NS + + +I+ ++ K + D L RQ N
Sbjct: 1571 EACKDLELACETIEITAAPKCKE----MQNSLNNDKNLVSIETVVPPKLLSDNLCRQTEN 1626
Query: 391 FETEAPKDVLFIKAKNNEDIEKTT 462
+T +F+K K +E++EK T
Sbjct: 1627 LKTSKS---IFLKVKVHENVEKET 1647
>DQ897648-1|ABI74674.1| 2649|Homo sapiens breast and ovarian cancer
susceptibility protein 2 truncated variant protein.
Length = 2649
Score = 34.3 bits (75), Expect = 0.32
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +1
Query: 211 KAMTDVKLTPNVGDATDAPNVTDDVIFVPNSAERNVDRFNIDEIITKKTIGDFLERQNVN 390
+A D++L + T AP + + NS + + +I+ ++ K + D L RQ N
Sbjct: 1571 EACKDLELACETIEITAAPKCKE----MQNSLNNDKNLVSIETVVPPKLLSDNLCRQTEN 1626
Query: 391 FETEAPKDVLFIKAKNNEDIEKTT 462
+T +F+K K +E++EK T
Sbjct: 1627 LKTSKS---IFLKVKVHENVEKET 1647
>AY436640-1|AAQ97181.1| 3418|Homo sapiens breast cancer 2, early onset
protein.
Length = 3418
Score = 34.3 bits (75), Expect = 0.32
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +1
Query: 211 KAMTDVKLTPNVGDATDAPNVTDDVIFVPNSAERNVDRFNIDEIITKKTIGDFLERQNVN 390
+A D++L + T AP + + NS + + +I+ ++ K + D L RQ N
Sbjct: 1571 EACKDLELACETIEITAAPKCKE----MQNSLNNDKNLVSIETVVPPKLLSDNLCRQTEN 1626
Query: 391 FETEAPKDVLFIKAKNNEDIEKTT 462
+T +F+K K +E++EK T
Sbjct: 1627 LKTSKS---IFLKVKVHENVEKET 1647
>AL445212-4|CAI40479.1| 3418|Homo sapiens breast cancer 2, early onset
protein.
Length = 3418
Score = 34.3 bits (75), Expect = 0.32
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +1
Query: 211 KAMTDVKLTPNVGDATDAPNVTDDVIFVPNSAERNVDRFNIDEIITKKTIGDFLERQNVN 390
+A D++L + T AP + + NS + + +I+ ++ K + D L RQ N
Sbjct: 1571 EACKDLELACETIEITAAPKCKE----MQNSLNNDKNLVSIETVVPPKLLSDNLCRQTEN 1626
Query: 391 FETEAPKDVLFIKAKNNEDIEKTT 462
+T +F+K K +E++EK T
Sbjct: 1627 LKTSKS---IFLKVKVHENVEKET 1647
>AL137247-6|CAI13195.1| 3418|Homo sapiens breast cancer 2, early onset
protein.
Length = 3418
Score = 34.3 bits (75), Expect = 0.32
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +1
Query: 211 KAMTDVKLTPNVGDATDAPNVTDDVIFVPNSAERNVDRFNIDEIITKKTIGDFLERQNVN 390
+A D++L + T AP + + NS + + +I+ ++ K + D L RQ N
Sbjct: 1571 EACKDLELACETIEITAAPKCKE----MQNSLNNDKNLVSIETVVPPKLLSDNLCRQTEN 1626
Query: 391 FETEAPKDVLFIKAKNNEDIEKTT 462
+T +F+K K +E++EK T
Sbjct: 1627 LKTSKS---IFLKVKVHENVEKET 1647
>BC093088-1|AAH93088.1| 294|Homo sapiens LRRIQ1 protein protein.
Length = 294
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 394 ETEAPKDVLFIKAKNNEDIEKTTKAETRRHGTDTRKLKIKS--LNCAELDCNNTQ 552
E EA D L I + EDIE K+ET+ +DT +++ L+C + N ++
Sbjct: 11 EIEAELDKLSISSLEKEDIESDAKSETQSDDSDTDSVELPESVLHCINIIKNRSK 65
>BC005399-1|AAH05399.1| 240|Homo sapiens LRRIQ1 protein protein.
Length = 240
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 394 ETEAPKDVLFIKAKNNEDIEKTTKAETRRHGTDTRKLKIKS--LNCAELDCNNTQ 552
E EA D L I + EDIE K+ET+ +DT +++ L+C + N ++
Sbjct: 11 EIEAELDKLSISSLEKEDIESDAKSETQSDDSDTDSVELPESVLHCINIIKNRSK 65
>AF348515-1|AAK29432.1| 715|Homo sapiens mutant early onset breast
cancer susceptibility protein 2 protein.
Length = 715
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 298 NSAERNVDRFNIDEIITKKTIGDFLERQNVNFETEAPKDVLFIKAKNNEDIEKTT 462
NS + + +I+ ++ K + D L RQ N +T +F+K K +E++EK T
Sbjct: 11 NSLNNDKNLVSIETVVPPKLLSDNLCRQTENLKTSKS---IFLKVKVHENVEKET 62
>BC130466-1|AAI30467.1| 1137|Homo sapiens adaptor-related protein
complex 4, epsilon 1 subunit protein.
Length = 1137
Score = 31.5 bits (68), Expect = 2.2
Identities = 23/81 (28%), Positives = 33/81 (40%)
Frame = +1
Query: 328 NIDEIITKKTIGDFLERQNVNFETEAPKDVLFIKAKNNEDIEKTTKAETRRHGTDTRKLK 507
N+D+ ITKK L + E + LF+ + I KA+T H RK K
Sbjct: 740 NVDQAITKKDQSQVLTQSKEEKEKQLLASSLFVGLGSESTINLLGKADTVSH-KFRRKSK 798
Query: 508 IKSLNCAELDCNNTQDSVCGS 570
+K E +T + C S
Sbjct: 799 VKEAKSGE--TTSTHNMTCSS 817
>BC126308-1|AAI26309.1| 1137|Homo sapiens adaptor-related protein
complex 4, epsilon 1 subunit protein.
Length = 1137
Score = 31.5 bits (68), Expect = 2.2
Identities = 23/81 (28%), Positives = 33/81 (40%)
Frame = +1
Query: 328 NIDEIITKKTIGDFLERQNVNFETEAPKDVLFIKAKNNEDIEKTTKAETRRHGTDTRKLK 507
N+D+ ITKK L + E + LF+ + I KA+T H RK K
Sbjct: 740 NVDQAITKKDQSQVLTQSKEEKEKQLLASSLFVGLGSESTINLLGKADTVSH-KFRRKSK 798
Query: 508 IKSLNCAELDCNNTQDSVCGS 570
+K E +T + C S
Sbjct: 799 VKEAKSGE--TTSTHNMTCSS 817
>AF155156-1|AAD43326.2| 1135|Homo sapiens adaptor-related protein
complex AP-4 epsilon subunit protein.
Length = 1135
Score = 31.5 bits (68), Expect = 2.2
Identities = 23/81 (28%), Positives = 33/81 (40%)
Frame = +1
Query: 328 NIDEIITKKTIGDFLERQNVNFETEAPKDVLFIKAKNNEDIEKTTKAETRRHGTDTRKLK 507
N+D+ ITKK L + E + LF+ + I KA+T H RK K
Sbjct: 738 NVDQAITKKDQSQVLTQSKEEKEKQLLASSLFVGLGSESTINLLGKADTVSH-KFRRKSK 796
Query: 508 IKSLNCAELDCNNTQDSVCGS 570
+K E +T + C S
Sbjct: 797 VKEAKSGE--TTSTHNMTCSS 815
>AB030653-1|BAA82969.1| 1137|Homo sapiens epsilon-adaptin protein.
Length = 1137
Score = 31.5 bits (68), Expect = 2.2
Identities = 23/81 (28%), Positives = 33/81 (40%)
Frame = +1
Query: 328 NIDEIITKKTIGDFLERQNVNFETEAPKDVLFIKAKNNEDIEKTTKAETRRHGTDTRKLK 507
N+D+ ITKK L + E + LF+ + I KA+T H RK K
Sbjct: 740 NVDQAITKKDQSQVLTQSKEEKEKQLLASSLFVGLGSESTINLLGKADTVSH-KFRRKSK 798
Query: 508 IKSLNCAELDCNNTQDSVCGS 570
+K E +T + C S
Sbjct: 799 VKEAKSGE--TTSTHNMTCSS 817
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,004,366
Number of Sequences: 237096
Number of extensions: 1508865
Number of successful extensions: 3796
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3796
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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