Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12f20
         (591 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    24   0.97 
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   6.8  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   6.8  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   9.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.0  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 392 VDSVLDVVRKEAEGCDCLQG 451
           +DS+++++R   + CD L G
Sbjct: 106 IDSIINIIRVRVDACDRLWG 125


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 395 LPAPRLRCSDP*PSCCQHPIAQRQSCPDG 309
           LPAPR+    P  SC         +CPDG
Sbjct: 48  LPAPRINSKSPLLSC---------ACPDG 67


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 395 LPAPRLRCSDP*PSCCQHPIAQRQSCPDG 309
           LPAPR+    P  SC         +CPDG
Sbjct: 48  LPAPRINSKSPLLSC---------ACPDG 67


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 469 TWRRNRSWSWNVTH 510
           +W +NR  SW +TH
Sbjct: 221 SWEQNR--SWRITH 232


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 281 QSPLSRAPGPQG*P 240
           Q P S APGPQ  P
Sbjct: 14  QQPSSGAPGPQPSP 27


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,696
Number of Sequences: 438
Number of extensions: 3535
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)