Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12f19
(519 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1200 - 35362412-35362432,35362526-35362715,35362799-353628... 33 0.10
07_03_1644 - 28338535-28339103,28339512-28340326,28341104-283412... 33 0.18
03_05_0696 - 26856413-26856416,26857917-26858524,26859041-268591... 31 0.73
06_03_0719 - 23845879-23845881,23846197-23846253,23846786-238470... 30 0.97
04_04_1630 - 34896021-34896143,34896329-34896403,34896500-348965... 29 3.0
01_07_0230 + 42170382-42170408,42170532-42170648,42171930-421721... 29 3.0
12_02_1245 - 27308143-27308787,27308923-27308983,27309064-273094... 28 3.9
03_06_0707 - 35655084-35655215,35656088-35656229,35656358-356564... 28 5.2
02_02_0200 - 7718760-7718816,7718910-7719011,7719643-7719726,771... 28 5.2
05_02_0097 - 6573093-6573254,6573297-6573398,6573922-6574005,657... 27 6.8
01_01_0747 - 5773771-5773863,5773960-5774061,5774527-5774610,577... 27 6.8
>01_06_1200 -
35362412-35362432,35362526-35362715,35362799-35362899,
35362985-35363116,35363204-35363302,35363493-35363568,
35363649-35363941,35364032-35364160,35364332-35364480,
35364562-35364633,35364728-35364776,35365039-35365107,
35365201-35365256,35365357-35365429,35365508-35365584,
35365847-35365934,35366086-35366259,35366358-35366473,
35366681-35366984,35367084-35367146,35367224-35367286,
35367393-35367506,35368672-35368675,35368894-35368952,
35369024-35369098,35369691-35369798,35372331-35372792
Length = 1071
Score = 33.5 bits (73), Expect = 0.10
Identities = 28/108 (25%), Positives = 51/108 (47%)
Frame = +3
Query: 153 IIFSDIADIMNELENNVNVPADVSRDNESEGDDNIENLLSEYYKYLERAHKQQRAYENYK 332
++ S ++ E++ N VS+ +S DDN+E LL + +K + A K ++ +
Sbjct: 250 VVISSDESHYDDSESSENFFDGVSKYTDSSSDDNMEKLLLKIFK-KQIAKKMKKKF--IS 306
Query: 333 SKNEIAFVPQQRQVKAKASVKSGAYSSNYDHPKYYRYPYSQHGSFSLF 476
S +++ + + KAK VKS S + KY+R S +F
Sbjct: 307 SSSDV--FRKHKAKKAKGVVKSDGSFSRFS-AKYFRRVVSSLSPHQMF 351
>07_03_1644 -
28338535-28339103,28339512-28340326,28341104-28341205,
28342469-28342594,28342782-28343071
Length = 633
Score = 32.7 bits (71), Expect = 0.18
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Frame = +3
Query: 150 TIIFSDIADIMNEL-----ENNVNVPADVSRDNESEGDDNIENLLSEYYKYLERAHKQQR 314
T ++S I IMN+ E V + ++ + ++L+ YYK H++
Sbjct: 161 TYLYSLIMPIMNKYISGLGEGKAMYLLFVKAETLTDSGIPVRSVLTSYYKSPHFLHRKHD 220
Query: 315 AYENYKSKNEIAFVPQQRQ 371
Y NY S +E+ P +Q
Sbjct: 221 LYNNYTSPDEVILCPDSQQ 239
>03_05_0696 -
26856413-26856416,26857917-26858524,26859041-26859101,
26859181-26859557,26860314-26861156
Length = 630
Score = 30.7 bits (66), Expect = 0.73
Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +3
Query: 144 YDTIIFSDIADIMNELENNVNVPADVSRDN--ESEGDDNIENLLSEYYKYLERAHKQQRA 317
Y + I+ L++ +N +V R E E E L+ +Y+++ +QQRA
Sbjct: 312 YTAVALQTISKHFRCLKDAINDQINVIRKKLGEEESSSGKEGKLTRL-RYIDQQLRQQRA 370
Query: 318 YENYKSKNEIAFVPQQRQVKAKASVKSGAYSSNYDHP 428
++ Y + A+ PQ+ + S+ ++ HP
Sbjct: 371 FQQYGLLQQNAWRPQRGLPENSVSILRAWLFEHFLHP 407
>06_03_0719 -
23845879-23845881,23846197-23846253,23846786-23847011,
23847118-23847245,23847339-23847444,23847543-23847622,
23847773-23847870,23848015-23848128,23848239-23848379,
23849012-23849096,23849789-23850016
Length = 421
Score = 30.3 bits (65), Expect = 0.97
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 378 AKASVKSGAYSSNYDHPKYYRYPYSQHGSFSLFWPSNQNGNYVPNLQ 518
AK S S +YSS+YDH S++ ++ S+QN Y P+++
Sbjct: 3 AKDSKPSYSYSSSYDHGNSSSGYNSRYPAYPANASSSQNTRYAPSME 49
>04_04_1630 - 34896021-34896143,34896329-34896403,34896500-34896556,
34897176-34897352,34897426-34897492,34898043-34898101,
34898188-34898241,34898455-34898604,34898709-34898918,
34898980-34899039,34899399-34899527,34899616-34899720,
34899935-34900024,34900630-34900695,34901047-34901115,
34901348-34901467,34901572-34901634,34901681-34901817,
34902070-34902160,34902298-34902463,34902700-34904172,
34905666-34905940,34906322-34906819,34906996-34907145,
34907840-34907911,34908006-34908266,34908478-34908558,
34908745-34908996,34909323-34909382,34909602-34909853,
34910385-34910549,34910589-34910849,34911267-34912307,
34913398-34913457,34914055-34914165,34914448-34914534,
34915227-34915300,34915397-34915490,34915644-34915689,
34916397-34916521
Length = 2501
Score = 28.7 bits (61), Expect = 3.0
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +3
Query: 195 NNVNVPADVSRDNESEGDDNIEN---LLSEYYKYLERAHKQQRAYENYKSK-NEIAFVPQ 362
+N A+ S +E +GDD+ EN LL + K LE A +E + +E A +
Sbjct: 1423 DNTEDEANSSGLDEEKGDDDAENLRDLLQKARKELEVARLNSTMFEEKAQRISESAIALK 1482
Query: 363 QRQVKAKASVKS 398
R KA++ V S
Sbjct: 1483 DRADKAQSDVSS 1494
>01_07_0230 +
42170382-42170408,42170532-42170648,42171930-42172119,
42172250-42172369,42172448-42172740,42172872-42172966,
42173075-42173181,42173514-42173602,42173809-42173895,
42174053-42174077,42174659-42174966,42175352-42175657
Length = 587
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +3
Query: 282 KY-LERAHKQQRAYENYKS--KNEIAFVPQQRQVKAKASVKSG 401
KY LE AHKQQR + Y S NE+ + Q ++ AS ++G
Sbjct: 137 KYELEMAHKQQRKIKGYGSCANNELEKLASQLTLETPASDQAG 179
>12_02_1245 -
27308143-27308787,27308923-27308983,27309064-27309440,
27309657-27310517
Length = 647
Score = 28.3 bits (60), Expect = 3.9
Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +3
Query: 144 YDTIIFSDIADIMNELENNVNVPADVSRDN--ESEGDDNIENLLSEYYKYLERAHKQQRA 317
Y + I+ L++ +N +V R E E E L+ +Y+++ +QQRA
Sbjct: 318 YTAVALQTISRHFRCLKDAINDQINVIRKKLGEEENSSGKEGKLTRL-RYIDQQLRQQRA 376
Query: 318 YENYKSKNEIAFVPQQRQVKAKASVKSGAYSSNYDHP 428
++ Y + A+ PQ+ + ++ ++ HP
Sbjct: 377 FQQYGMIPQNAWRPQRGLPENSVTILRAWLFEHFLHP 413
>03_06_0707 -
35655084-35655215,35656088-35656229,35656358-35656485,
35656852-35656944,35657183-35657252,35657324-35657445,
35658143-35658265,35659453-35659710,35659995-35660074,
35660244-35660389,35660773-35660906,35661001-35661137,
35663013-35663135,35663521-35663590,35663925-35664050,
35664166-35664393
Length = 703
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/72 (20%), Positives = 33/72 (45%)
Frame = +3
Query: 177 IMNELENNVNVPADVSRDNESEGDDNIENLLSEYYKYLERAHKQQRAYENYKSKNEIAFV 356
+ +L + + D+ ++N + DN+ L +Y +E H + +EN + K +
Sbjct: 187 LYRDLVSQGKLQHDIYQENVATQLDNLLRRLEQYEMEMEDYHARLSMWENTREKQRRRLL 246
Query: 357 PQQRQVKAKASV 392
Q+ + K + V
Sbjct: 247 VQEAEDKQRDGV 258
>02_02_0200 -
7718760-7718816,7718910-7719011,7719643-7719726,
7719821-7719916,7720016-7720066,7720162-7720302,
7720717-7720773,7720864-7720938,7721033-7721305,
7721382-7721441,7721531-7721620,7722519-7722638
Length = 401
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = -1
Query: 354 QMLFHF*ICNFRMPFV-----VYELFLSICNIRRVSSQCYRLLHSHYLC*HPLVH 205
++L H+ N RMP + VY++F + I V C+R + L PL H
Sbjct: 158 RVLKHYSNMNQRMPLIYVKLYVYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH 212
>05_02_0097 -
6573093-6573254,6573297-6573398,6573922-6574005,
6574190-6574285,6574373-6574423,6574537-6574677,
6575025-6575081,6575163-6575237,6575323-6575595,
6575689-6575748,6576184-6576285,6576377-6576451
Length = 425
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = -1
Query: 354 QMLFHF*ICNFRMPFV-----VYELFLSICNIRRVSSQCYRLLHSHYLC*HPLVH 205
++L H+ N RMP + +Y+LF + I V C+R + + PL H
Sbjct: 147 RVLKHYSNANHRMPLIYVKLYMYQLFRGLAYIHTVPGVCHRDVKPQNVLVDPLTH 201
>01_01_0747 -
5773771-5773863,5773960-5774061,5774527-5774610,
5774777-5774872,5774950-5775000,5775105-5775245,
5775704-5775760,5775845-5775919,5776005-5776277,
5776371-5776430,5776969-5777061,5777227-5777298
Length = 398
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = -1
Query: 354 QMLFHF*ICNFRMPFV-----VYELFLSICNIRRVSSQCYRLLHSHYLC*HPLVH 205
++L H+ N RMP + +Y+LF + I V C+R + + PL H
Sbjct: 143 RVLKHYSNANQRMPLIYVKLYIYQLFRGLAYIHTVPGVCHRDVKPQNVLVDPLTH 197
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,317,056
Number of Sequences: 37544
Number of extensions: 195567
Number of successful extensions: 628
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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