Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12f19
         (519 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061487-1|AAL29035.1|  749|Drosophila melanogaster LD45152p pro...    31   1.2  
AE014134-540|AAF51159.2|  749|Drosophila melanogaster CG3605-PA ...    31   1.2  
U71002-1|AAC47315.1| 1526|Drosophila melanogaster Frazzled protein.    30   1.6  
AE014296-450|AAF47642.2| 1932|Drosophila melanogaster CG13800-PA...    30   1.6  
AE013599-1515|AAF58493.1| 1526|Drosophila melanogaster CG8581-PA...    30   1.6  
BT015282-1|AAT94511.1| 1250|Drosophila melanogaster LD04601p pro...    30   2.2  
AF255733-1|AAF71288.1| 1250|Drosophila melanogaster DNA topoisom...    30   2.2  
AE014134-3114|AAF53813.2| 1250|Drosophila melanogaster CG10123-P...    30   2.2  
BT028799-1|ABI34180.1|  634|Drosophila melanogaster LD13728p pro...    29   2.9  
BT011357-1|AAR96149.1|  634|Drosophila melanogaster RE70312p pro...    29   2.9  
AY122196-1|AAM52708.1|  352|Drosophila melanogaster LD45766p pro...    29   2.9  
AE014297-1108|AAF54502.3|  634|Drosophila melanogaster CG6254-PA...    29   2.9  
L41642-1|AAA85085.1|  773|Drosophila melanogaster lin19 protein ...    29   5.0  
AE014298-448|AAF45811.2|  626|Drosophila melanogaster CG2681-PA ...    29   5.0  
BT011475-1|AAR99133.1|  964|Drosophila melanogaster RE11167p pro...    28   6.6  
AY060655-1|AAL28203.1|  556|Drosophila melanogaster GH08511p pro...    28   6.6  
AE014297-2558|AAN13781.1|  679|Drosophila melanogaster CG31231-P...    28   6.6  
AE014134-2118|AAN10790.1|  964|Drosophila melanogaster CG6686-PB...    28   6.6  
BT003748-1|AAO41409.1|  238|Drosophila melanogaster RH61335p pro...    28   8.7  
AY128475-1|AAM75068.1|  726|Drosophila melanogaster RE33588p pro...    28   8.7  
AF160893-1|AAD46833.1|  726|Drosophila melanogaster GM10765p pro...    28   8.7  
AE014296-935|AAF50805.1|  726|Drosophila melanogaster CG10670-PA...    28   8.7  
AE014296-642|AAN11562.1|  238|Drosophila melanogaster CG12013-PD...    28   8.7  
AB103508-1|BAC57447.1|  726|Drosophila melanogaster xpg like end...    28   8.7  

>AY061487-1|AAL29035.1|  749|Drosophila melanogaster LD45152p
           protein.
          Length = 749

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +3

Query: 213 ADVSRDNESEGDDNIENLLSEYYKYLERAH----KQQRAYENYKSKNEIAFVPQQRQVKA 380
           ADV  D+E + D+ +    S+      +A     K++R  +N K +++I F  QQ+  +A
Sbjct: 100 ADVGEDSEEDADNQVNGSASQKTGKQSKAERNKKKKKRKKQNRKIRHQIEFARQQQLAQA 159

Query: 381 KASVKSGAYSSNYDH 425
           + +      S    H
Sbjct: 160 EENEPEAKDSETKAH 174


>AE014134-540|AAF51159.2|  749|Drosophila melanogaster CG3605-PA
           protein.
          Length = 749

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +3

Query: 213 ADVSRDNESEGDDNIENLLSEYYKYLERAH----KQQRAYENYKSKNEIAFVPQQRQVKA 380
           ADV  D+E + D+ +    S+      +A     K++R  +N K +++I F  QQ+  +A
Sbjct: 100 ADVGEDSEEDADNQVNGSASQKTGKQSKAERNKKKKKRKKQNRKIRHQIEFARQQQLAQA 159

Query: 381 KASVKSGAYSSNYDH 425
           + +      S    H
Sbjct: 160 EENEPEAKDSETKAH 174


>U71002-1|AAC47315.1| 1526|Drosophila melanogaster Frazzled protein.
          Length = 1526

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +3

Query: 228 DNESEGDDNIENLLSEYYKYLERAHKQQRAYENYKSKNEIAFVPQQRQVKAKASVKSGAY 407
           D++ + DD  +  L E YK  E AHK   +++  KSK        Q+Q ++ AS  S   
Sbjct: 537 DDDYDEDDPAKEALLEAYKQGEDAHKILDSWQQSKSKK------SQQQKQSPASPDSPEQ 590

Query: 408 SSNYDHP 428
             +  HP
Sbjct: 591 DPSVPHP 597


>AE014296-450|AAF47642.2| 1932|Drosophila melanogaster CG13800-PA
           protein.
          Length = 1932

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
 Frame = +3

Query: 183 NELENNVNVPADVSRDNESEGDDNIENLLSEYYKY--LERAHKQQRAYENYKSKNEIAFV 356
           N+ E N     D  R N S G  + +    + + +  L R  K+  +  + +   +  FV
Sbjct: 55  NQQEENEEEDMDRLRGNHSIGGSSQQLSGKQKWSFGRLFRKKKEAESASSSEEDRKAGFV 114

Query: 357 PQQRQVKAKASVKSGAYS---SNYDH 425
           P QRQ  +K   K G  S   S +DH
Sbjct: 115 PAQRQSASKPKGKHGKGSRGCSKFDH 140


>AE013599-1515|AAF58493.1| 1526|Drosophila melanogaster CG8581-PA,
           isoform A protein.
          Length = 1526

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +3

Query: 228 DNESEGDDNIENLLSEYYKYLERAHKQQRAYENYKSKNEIAFVPQQRQVKAKASVKSGAY 407
           D++ + DD  +  L E YK  E AHK   +++  KSK        Q+Q ++ AS  S   
Sbjct: 537 DDDYDEDDPAKEALLEAYKQGEDAHKILDSWQQSKSKK------SQQQKQSPASPDSPEQ 590

Query: 408 SSNYDHP 428
             +  HP
Sbjct: 591 DPSVPHP 597


>BT015282-1|AAT94511.1| 1250|Drosophila melanogaster LD04601p protein.
          Length = 1250

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 26/82 (31%), Positives = 37/82 (45%)
 Frame = +3

Query: 63   FVSAVLAGICKCESDSLEVNDIETSPFYDTIIFSDIADIMNELENNVNVPADVSRDNESE 242
            F  A+LA     ES S +   I   P  D I  +  AD   E E  VN     +   ES 
Sbjct: 907  FEDAMLAAAESVESSS-QPKTISMVPLDDDIAAAFAADDDAEFEALVN---GGTMPTESN 962

Query: 243  GDDNIENLLSEYYKYLERAHKQ 308
            GD  ++  LSE+ K  ++A ++
Sbjct: 963  GDQQLDKSLSEWIKEQDKADER 984


>AF255733-1|AAF71288.1| 1250|Drosophila melanogaster DNA topoisomerase
            III alpha protein.
          Length = 1250

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 26/82 (31%), Positives = 37/82 (45%)
 Frame = +3

Query: 63   FVSAVLAGICKCESDSLEVNDIETSPFYDTIIFSDIADIMNELENNVNVPADVSRDNESE 242
            F  A+LA     ES S +   I   P  D I  +  AD   E E  VN     +   ES 
Sbjct: 907  FEDAMLAAAESVESSS-QPKTISMVPLDDDIAAAFAADDDAEFEALVN---GGTMPTESN 962

Query: 243  GDDNIENLLSEYYKYLERAHKQ 308
            GD  ++  LSE+ K  ++A ++
Sbjct: 963  GDQQLDKSLSEWIKEQDKADER 984


>AE014134-3114|AAF53813.2| 1250|Drosophila melanogaster CG10123-PA
            protein.
          Length = 1250

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 26/82 (31%), Positives = 37/82 (45%)
 Frame = +3

Query: 63   FVSAVLAGICKCESDSLEVNDIETSPFYDTIIFSDIADIMNELENNVNVPADVSRDNESE 242
            F  A+LA     ES S +   I   P  D I  +  AD   E E  VN     +   ES 
Sbjct: 907  FEDAMLAAAESVESSS-QPKTISMVPLDDDIAAAFAADDDAEFEALVN---GGTMPTESN 962

Query: 243  GDDNIENLLSEYYKYLERAHKQ 308
            GD  ++  LSE+ K  ++A ++
Sbjct: 963  GDQQLDKSLSEWIKEQDKADER 984


>BT028799-1|ABI34180.1|  634|Drosophila melanogaster LD13728p
           protein.
          Length = 634

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/53 (22%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +3

Query: 174 DIMNELENNVNVPADVSRDNESEGDDNIENLLSEY-YKYLERAHKQQRAYENY 329
           D +  +E+N +   D+SR++ ++ +D I  + + Y     ++ +K+ +AY+ +
Sbjct: 295 DTVESIESNEDTQEDISREHVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRH 347


>BT011357-1|AAR96149.1|  634|Drosophila melanogaster RE70312p
           protein.
          Length = 634

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/53 (22%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +3

Query: 174 DIMNELENNVNVPADVSRDNESEGDDNIENLLSEY-YKYLERAHKQQRAYENY 329
           D +  +E+N +   D+SR++ ++ +D I  + + Y     ++ +K+ +AY+ +
Sbjct: 295 DTVESIESNEDTQEDISREHVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRH 347


>AY122196-1|AAM52708.1|  352|Drosophila melanogaster LD45766p
           protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/53 (22%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +3

Query: 174 DIMNELENNVNVPADVSRDNESEGDDNIENLLSEY-YKYLERAHKQQRAYENY 329
           D +  +E+N +   D+SR++ ++ +D I  + + Y     ++ +K+ +AY+ +
Sbjct: 13  DTVESIESNEDTQEDISREHVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRH 65


>AE014297-1108|AAF54502.3|  634|Drosophila melanogaster CG6254-PA
           protein.
          Length = 634

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/53 (22%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +3

Query: 174 DIMNELENNVNVPADVSRDNESEGDDNIENLLSEY-YKYLERAHKQQRAYENY 329
           D +  +E+N +   D+SR++ ++ +D I  + + Y     ++ +K+ +AY+ +
Sbjct: 295 DTVESIESNEDTQEDISREHVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRH 347


>L41642-1|AAA85085.1|  773|Drosophila melanogaster lin19 protein
           protein.
          Length = 773

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +3

Query: 213 ADVSRDNESEGDDNIE-NLLSEYYKYLERAHKQQRAYENYKSKNEIAFV 356
           AD S   E E D  +  N ++EY K++E   +++     + SKN ++++
Sbjct: 229 ADTSAFYEKESDAFLSTNTVTEYLKHVENRLEEETQRRGFNSKNGLSYL 277


>AE014298-448|AAF45811.2|  626|Drosophila melanogaster CG2681-PA
           protein.
          Length = 626

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 267 VSSQCYRLLHSHYLC*HPLVHSRYFLIHSLCLLCH 163
           V  QC R+L    LC  P  +SR   + +LC   H
Sbjct: 226 VCEQCTRILLMCPLCKEPFTNSRSLTVEALCAKAH 260


>BT011475-1|AAR99133.1|  964|Drosophila melanogaster RE11167p
           protein.
          Length = 964

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +3

Query: 282 KYLERAHKQQRAYENYKSKNEIAFVPQQRQVKAKASVKSGAYSSNYD 422
           K  ERA++     E+    ++   VP Q QV+A+A ++    SSN D
Sbjct: 66  KERERANEVISLEESDSDSSDCVEVPVQAQVQAQAKLRDARESSNRD 112


>AY060655-1|AAL28203.1|  556|Drosophila melanogaster GH08511p
           protein.
          Length = 556

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 99  ESDSLEVNDIETSPFYDTIIFSDIADIMNELENNVNVPADVSRDNESEG 245
           + D  E++ +E+        F DI  I+NE   +V V  ++  D +SEG
Sbjct: 4   DEDKEELHSVESGGEDSEDDFEDIKAILNEKPPSVVVEEEIEEDLDSEG 52


>AE014297-2558|AAN13781.1|  679|Drosophila melanogaster CG31231-PA
           protein.
          Length = 679

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 99  ESDSLEVNDIETSPFYDTIIFSDIADIMNELENNVNVPADVSRDNESEG 245
           + D  E++ +E+        F DI  I+NE   +V V  ++  D +SEG
Sbjct: 127 DEDKEELHSVESGGEDSEDDFEDIKAILNEKPPSVVVEEEIEEDLDSEG 175


>AE014134-2118|AAN10790.1|  964|Drosophila melanogaster CG6686-PB,
           isoform B protein.
          Length = 964

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +3

Query: 282 KYLERAHKQQRAYENYKSKNEIAFVPQQRQVKAKASVKSGAYSSNYD 422
           K  ERA++     E+    ++   VP Q QV+A+A ++    SSN D
Sbjct: 66  KERERANEVISLEESDSDSSDCVEVPVQAQVQAQAKLRDARESSNRD 112


>BT003748-1|AAO41409.1|  238|Drosophila melanogaster RH61335p
           protein.
          Length = 238

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 26/110 (23%), Positives = 43/110 (39%)
 Frame = +3

Query: 180 MNELENNVNVPADVSRDNESEGDDNIENLLSEYYKYLERAHKQQRAYENYKSKNEIAFVP 359
           MN + +        + D  + GD   +N  S Y   ++  H    + E YK K  +  V 
Sbjct: 53  MNAISSAAQHSTAAAIDMSANGD--YKNAASIYEFTVKDTHGNDVSLEKYKGK--VVLV- 107

Query: 360 QQRQVKAKASVKSGAYSSNYDHPKYYRYPYSQHGSFSLFWPSNQNGNYVP 509
                    + K G   +NY+     +  Y + G   L +P NQ G+ +P
Sbjct: 108 ------VNIASKCGLTKNNYEKLTDLKEKYGERGLVILNFPCNQFGSQMP 151


>AY128475-1|AAM75068.1|  726|Drosophila melanogaster RE33588p
           protein.
          Length = 726

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 162 SDIADIMNELENNVNVPADVSRDNESEGDDNI 257
           SD AD+  EL N+  VP D   + E E +D++
Sbjct: 690 SDNADVFEELMNSSLVPQDQEDNAEDEEEDDL 721


>AF160893-1|AAD46833.1|  726|Drosophila melanogaster GM10765p
           protein.
          Length = 726

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 162 SDIADIMNELENNVNVPADVSRDNESEGDDNI 257
           SD AD+  EL N+  VP D   + E E +D++
Sbjct: 690 SDNADVFEELMNSSLVPQDQEDNAEDEEEDDL 721


>AE014296-935|AAF50805.1|  726|Drosophila melanogaster CG10670-PA
           protein.
          Length = 726

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 162 SDIADIMNELENNVNVPADVSRDNESEGDDNI 257
           SD AD+  EL N+  VP D   + E E +D++
Sbjct: 690 SDNADVFEELMNSSLVPQDQEDNAEDEEEDDL 721


>AE014296-642|AAN11562.1|  238|Drosophila melanogaster CG12013-PD,
           isoform D protein.
          Length = 238

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 26/110 (23%), Positives = 43/110 (39%)
 Frame = +3

Query: 180 MNELENNVNVPADVSRDNESEGDDNIENLLSEYYKYLERAHKQQRAYENYKSKNEIAFVP 359
           MN + +        + D  + GD   +N  S Y   ++  H    + E YK K  +  V 
Sbjct: 53  MNAISSAAQHSTAAAIDMSANGD--YKNAASIYEFTVKDTHGNDVSLEKYKGK--VVLV- 107

Query: 360 QQRQVKAKASVKSGAYSSNYDHPKYYRYPYSQHGSFSLFWPSNQNGNYVP 509
                    + K G   +NY+     +  Y + G   L +P NQ G+ +P
Sbjct: 108 ------VNIASKCGLTKNNYEKLTDLKEKYGERGLVILNFPCNQFGSQMP 151


>AB103508-1|BAC57447.1|  726|Drosophila melanogaster xpg like
           endonuclease protein.
          Length = 726

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 162 SDIADIMNELENNVNVPADVSRDNESEGDDNI 257
           SD AD+  EL N+  VP D   + E E +D++
Sbjct: 690 SDNADVFEELMNSSLVPQDQEDNAEDEEEDDL 721


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,634,129
Number of Sequences: 53049
Number of extensions: 367578
Number of successful extensions: 1289
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)