Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12f19
         (519 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74032-2|CAA98466.2|  248|Caenorhabditis elegans Hypothetical pr...    31   0.65 
Z81041-2|CAB02787.4| 1403|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z66515-8|CAD59154.1|  488|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.      30   1.1  
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl...    30   1.1  
Z81042-3|CAB02794.2|  660|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z71259-4|CAA95788.2|  501|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z82095-3|CAB05028.1|  411|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos...    27   6.1  
Z73978-1|CAA98294.1|  236|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AF022972-5|AAC48237.1|  523|Caenorhabditis elegans Udp-glucurono...    27   8.0  

>Z74032-2|CAA98466.2|  248|Caenorhabditis elegans Hypothetical
           protein F35B12.3 protein.
          Length = 248

 Score = 30.7 bits (66), Expect = 0.65
 Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
 Frame = +3

Query: 234 ESEGDDNIENLLSEYYKYLERAHKQQRAYENYKSKNEI-AFVPQQRQVKAKASVKSGA-Y 407
           +  G D+ ++   + Y+  +R    QR Y+ Y+S        P++      + V     Y
Sbjct: 61  QGNGQDSYQDF--QGYQGYQRGQGGQRGYQGYQSNQRSQGSYPERYDSSMYSPVMDLTNY 118

Query: 408 SSNYDHPKYYRYPYSQHGSFSLFWPSNQNGNYVPNLQ 518
             +   P+YY YP S     + ++  NQN  Y+   Q
Sbjct: 119 YGSQGTPQYYGYPSSASYQMTPYY-QNQNQGYMQQQQ 154


>Z81041-2|CAB02787.4| 1403|Caenorhabditis elegans Hypothetical protein
            C27A7.4 protein.
          Length = 1403

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
 Frame = +3

Query: 93   KCESDSLEVNDIETSPFYDTIIFS--DIADIMNELENNVNVPADVSRDNESEGDDNIENL 266
            KC + ++E++ +E +     II++  +  D+MN+L  + N+ +      E++   ++ N 
Sbjct: 788  KCAALAIELSMLEEA----LIIYAQNERYDLMNKLYQSQNMWSSAFEIAETKDRIHLRNT 843

Query: 267  LSEYYKYLERAHKQ---QRAYENYKSKNEIAF 353
               Y KYLE    Q   + A ENY+     AF
Sbjct: 844  HYNYAKYLEARRDQASIEAAIENYEKAGVHAF 875


>Z66515-8|CAD59154.1|  488|Caenorhabditis elegans Hypothetical
           protein R53.7b protein.
          Length = 488

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 168 IADIMNELENNVNVPADVSRDNESEG 245
           + D  NE++NN+N PA   R N + G
Sbjct: 46  MVDAENEVDNNINTPASEQRRNSTSG 71


>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
          Length = 1751

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +3

Query: 159 FSDIADIMNELENNVNVPADVSRDNESEGDDNIENLLSEYYKYLERAHKQQRAYE 323
           F+ IA  +   E+ ++ P D+   +  +    ++ L+SE+ KY+E   K+Q  +E
Sbjct: 421 FASIATWIAGAEHILSRPLDLDATDAKKTVTMLQKLISEHQKYMEDLPKRQEDFE 475


>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
           anchorage protein1 protein.
          Length = 8545

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +3

Query: 159 FSDIADIMNELENNVNVPADVSRDNESEGDDNIENLLSEYYKYLERAHKQQRAYE 323
           F+ IA  +   E+ ++ P D+   +  +    ++ L+SE+ KY+E   K+Q  +E
Sbjct: 421 FASIATWIAGAEHILSRPLDLDATDAKKTVTMLQKLISEHQKYMEDLPKRQEDFE 475


>Z81042-3|CAB02794.2|  660|Caenorhabditis elegans Hypothetical
           protein C27H6.3 protein.
          Length = 660

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 129 ETSPFYDTIIFSDIADIMNELENNVNVPADVSRDNESEGDDNIENL 266
           E   + D+    D +  ++E+E N N   +   D+E E DD +EN+
Sbjct: 7   ENDSYSDSENEEDFSGFLSEIEENENED-EFENDDEFEDDDELENV 51


>Z71259-4|CAA95788.2|  501|Caenorhabditis elegans Hypothetical
           protein F13G3.3 protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 57  IFFVSAVLAGICKCESDSLEVNDIETSPFYDTIIFS 164
           +FFV+AVL    + +S  LE  ++  S  YD  I+S
Sbjct: 19  LFFVTAVLLQFIRIDSPDLENEEVFHSAPYDIFIYS 54


>Z82095-3|CAB05028.1|  411|Caenorhabditis elegans Hypothetical
           protein ZK849.5 protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +3

Query: 177 IMNELENNVNVPADVSRDNESEGDDNIENLLSEYYKYLERAHKQQRA-YENYKSKNEIAF 353
           I N L+N +++ + +  ++    +  IEN    YY+  E+  K+ RA  E+ K+    +F
Sbjct: 315 IDNNLKNGLDIVSGLCGNHRKLAEHEIENDCRPYYQTNEQDRKKNRAPPESLKNVEFKSF 374

Query: 354 VPQQRQVKAKASVKS 398
             ++    +   VKS
Sbjct: 375 TMEKASKDSPMVVKS 389


>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
            protein 1 protein.
          Length = 1963

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
 Frame = +3

Query: 93   KCESD-SLEVNDIETSPFYDTIIFSDIADIMNELENNVNVPADVSRDNESEGDDNIENLL 269
            K ESD ++   D+E       ++   I D+ NELEN         +         IEN +
Sbjct: 1570 KSESDRAISNKDVEAEEKRRGLL-KQIRDLENELENEKR-----GKSGAVSHRKKIENQI 1623

Query: 270  SEYYKYLERAHKQQRAYENYKSKNE 344
             E  + LE A++ +  Y     KN+
Sbjct: 1624 GELEQQLEVANRLKEEYNKQLKKNQ 1648


>Z73978-1|CAA98294.1|  236|Caenorhabditis elegans Hypothetical
           protein ZC302.3 protein.
          Length = 236

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 285 YLERAHKQQRAYENYKSKNEIAFVPQQRQVKAK-ASVKSGAY 407
           YL+R    Q  Y NYK+    +  P Q   K K A++K+ AY
Sbjct: 148 YLDRVVSLQTEYLNYKANRNDSRSPSQLVKKIKDATMKAEAY 189


>AF022972-5|AAC48237.1|  523|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein38 protein.
          Length = 523

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 350 CYFIFRFVIFVCPLLFMSSF*VFVI 276
           C FI  FV+FV   L  S F +F+I
Sbjct: 494 CVFILTFVVFVVTKLVQSLFDIFLI 518


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,376,230
Number of Sequences: 27780
Number of extensions: 198452
Number of successful extensions: 789
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)