Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12f17
(528 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1B1.02c |||NAD/NADH kinase |Schizosaccharomyces pombe|chr 1|... 143 2e-35
SPAC3H5.11 |||NAD/NADH kinase |Schizosaccharomyces pombe|chr 1||... 140 9e-35
SPCC24B10.02c |||NAD/NADH kinase|Schizosaccharomyces pombe|chr 3... 137 8e-34
SPAC323.01c |||mitochondrial NADH kinase |Schizosaccharomyces po... 133 1e-32
SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces... 28 0.99
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 27 1.3
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 27 1.7
SPAC3A12.08 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.3
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 25 5.3
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 9.2
>SPAC1B1.02c |||NAD/NADH kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 537
Score = 143 bits (346), Expect = 2e-35
Identities = 65/158 (41%), Positives = 104/158 (65%)
Frame = +1
Query: 55 FQQSVPPVMAFHLGSLGFLTPFEFNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQDDNK 234
FQ VPPV++F GFL+ + + + + + LR R QC ++R + +
Sbjct: 298 FQDVVPPVLSFSTAKAGFLSILPIAEYTKTLDLIFHRGFTVNLRMRFQCSIMRYVGEHST 357
Query: 235 DKKKPTTILVLNEVVVDRGPSPYLSNIDLFLDGKHITSVQGDGLIVSTPTGSTAYAVAAG 414
+ VLNE+++DRGP+P++ ++DL+++ ++IT++Q DG+ VSTPTGSTAY+VAAG
Sbjct: 358 HICEGQ-YSVLNELLIDRGPNPFMISLDLYVENEYITTLQSDGVCVSTPTGSTAYSVAAG 416
Query: 415 ASMIHPSVPAIMVTPICPHSLSFRPIVVPAGVEXXIAL 528
S+ HP +PAI+++ ICPHSLSFRPI++P + I +
Sbjct: 417 GSLCHPGIPAILISAICPHSLSFRPIILPDSMTLRIVV 454
>SPAC3H5.11 |||NAD/NADH kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 393
Score = 140 bits (340), Expect = 9e-35
Identities = 70/175 (40%), Positives = 112/175 (64%), Gaps = 17/175 (9%)
Frame = +1
Query: 55 FQQSVPPVMAFHLGSLGFLTPFEFNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQ---- 222
FQ++VPP+M F +G+LGFLT F+ ++ ++ + + LR+R +C V++K
Sbjct: 160 FQRTVPPIMPFAMGTLGFLTHFDVKKYKTSILEICN-EMYVHLRTRFECRVMKKKNRTQW 218
Query: 223 ---DDNKDKKKPTT----------ILVLNEVVVDRGPSPYLSNIDLFLDGKHITSVQGDG 363
D++ + T ++VLNEVV+DRGP+ +S+I L++D K++T+V+ DG
Sbjct: 219 INIDEHLSQSLHATDTETHTFTDSLVVLNEVVIDRGPNTAMSDIMLYVDSKYLTTVKADG 278
Query: 364 LIVSTPTGSTAYAVAAGASMIHPSVPAIMVTPICPHSLSFRPIVVPAGVEXXIAL 528
L +STPTGSTAY++AAG S+ HP + ++V+PIC HSLS RPI VP + + +
Sbjct: 279 LCISTPTGSTAYSLAAGGSLCHPDISVMIVSPICAHSLSLRPIHVPDSMALHVVI 333
>SPCC24B10.02c |||NAD/NADH kinase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 449
Score = 137 bits (332), Expect = 8e-34
Identities = 64/150 (42%), Positives = 101/150 (67%), Gaps = 1/150 (0%)
Frame = +1
Query: 55 FQQSVPPVMAFHLGSL-GFLTPFEFNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQDDN 231
FQ+ PPV++F + GFLT F +N+Q+ + VL + +L SRLQC K +
Sbjct: 194 FQKIGPPVLSFSDDDVPGFLTHFSLSNYQQHLYQVLTQNVSLRFCSRLQCS-FHKYDEKT 252
Query: 232 KDKKKPTTILVLNEVVVDRGPSPYLSNIDLFLDGKHITSVQGDGLIVSTPTGSTAYAVAA 411
K +T L+E+++ RG P++SN++++ + + +T VQ DGL+V+TPTGST + A
Sbjct: 253 KQYSLASTTYSLDEILISRGEHPFISNLNVYNNSELMTVVQADGLVVATPTGSTNISANA 312
Query: 412 GASMIHPSVPAIMVTPICPHSLSFRPIVVP 501
G S++HP++ AI+VTP+CPH+LSFRPI++P
Sbjct: 313 GGSLVHPALNAILVTPVCPHTLSFRPIILP 342
>SPAC323.01c |||mitochondrial NADH kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 133 bits (322), Expect = 1e-32
Identities = 59/150 (39%), Positives = 101/150 (67%)
Frame = +1
Query: 52 FFQQSVPPVMAFHLGSLGFLTPFEFNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQDDN 231
F + +PP+++F LG+LGFL PF+F +FQ + + + +R RL+ + K +++
Sbjct: 144 FARSGMPPILSFSLGTLGFLLPFDFGSFQTAFADFYNSRSFVLMRMRLRVAMKTKLYNES 203
Query: 232 KDKKKPTTILVLNEVVVDRGPSPYLSNIDLFLDGKHITSVQGDGLIVSTPTGSTAYAVAA 411
I +NE+ + RG SP+++ + +F++ K +T DGLI+STPTGSTAY++++
Sbjct: 204 --------IYAMNEMHIHRGLSPHMAVLKVFVNDKFLTEAVADGLIISTPTGSTAYSLSS 255
Query: 412 GASMIHPSVPAIMVTPICPHSLSFRPIVVP 501
G ++HPS+ A+++TPICP+SLSFRP++ P
Sbjct: 256 GGPIVHPSINALLLTPICPNSLSFRPVLFP 285
>SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1155
Score = 27.9 bits (59), Expect = 0.99
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 289 GPSPYLSNIDLFLDGK--HITSVQGDGLIVSTPTGSTAYAVA-AGASMIHPS 435
GP ++ + LF+DGK S QGD V T G YA++ +G S+ +PS
Sbjct: 640 GPVTHIGSTSLFIDGKIESFISFQGDFNEVYTSEG---YAISTSGFSLWNPS 688
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 271 EVVVDRGPSPYLSNIDLFLDGKHITSVQGDGLIVSTPT 384
E+ V G + Y+ + LF++ +H+ SV G + V +P+
Sbjct: 10 EITVPTGKT-YIQPVGLFINNQHVDSVHGGRVKVYSPS 46
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 440 GTDGWIMLAPAATAYAVLPVGVDTISPS 357
G W+ML Y L +G+ TISPS
Sbjct: 1206 GGFAWLMLMIFTLYYTTLGIGIATISPS 1233
>SPAC3A12.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 214
Score = 26.6 bits (56), Expect = 2.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 461 IGVTMMAGTDGWIMLAPAATAYAVLPVGVDTIS 363
IG M+ G W++ + A TAY LP IS
Sbjct: 15 IGGFMVGGLASWVVSSDAYTAYHRLPASAKHIS 47
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 25.4 bits (53), Expect = 5.3
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 434 DGWIMLAPAATAYAVLPVGVDTISPSP 354
D ++ AP+ T++AV P + ++PSP
Sbjct: 221 DSYLFSAPSDTSHAVSPGMLTFVTPSP 247
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 24.6 bits (51), Expect = 9.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 452 TMMAGTDGWIMLAPAATAYAVLPVGVDTISPSPCTDVMCFPS 327
T A T + +A + TA + LPV + S TD+ PS
Sbjct: 225 TESAYTSSSVDIAASTTASSTLPVSTSEATVSFSTDIPATPS 266
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,917,207
Number of Sequences: 5004
Number of extensions: 34576
Number of successful extensions: 109
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 216376042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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