Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12f16
         (476 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069569-1|AAL39714.1|  476|Drosophila melanogaster LD29847p pro...   227   8e-60
AE014134-1100|AAF52389.2|  476|Drosophila melanogaster CG9539-PA...   227   8e-60
AB062670-1|BAB78518.1|  476|Drosophila melanogaster DSec61alpha ...   227   8e-60
AE014298-1331|AAF46494.1| 4547|Drosophila melanogaster CG12139-P...    28   5.7  
AE013599-212|AAM70820.1|  305|Drosophila melanogaster CG9430-PA ...    27   9.9  

>AY069569-1|AAL39714.1|  476|Drosophila melanogaster LD29847p
           protein.
          Length = 476

 Score =  227 bits (554), Expect = 8e-60
 Identities = 108/109 (99%), Positives = 109/109 (100%)
 Frame = +2

Query: 137 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 316
           MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
Sbjct: 1   MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 60

Query: 317 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDK 463
           PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKD+
Sbjct: 61  PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDR 109


>AE014134-1100|AAF52389.2|  476|Drosophila melanogaster CG9539-PA
           protein.
          Length = 476

 Score =  227 bits (554), Expect = 8e-60
 Identities = 108/109 (99%), Positives = 109/109 (100%)
 Frame = +2

Query: 137 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 316
           MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
Sbjct: 1   MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 60

Query: 317 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDK 463
           PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKD+
Sbjct: 61  PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDR 109


>AB062670-1|BAB78518.1|  476|Drosophila melanogaster DSec61alpha
           protein.
          Length = 476

 Score =  227 bits (554), Expect = 8e-60
 Identities = 108/109 (99%), Positives = 109/109 (100%)
 Frame = +2

Query: 137 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 316
           MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
Sbjct: 1   MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 60

Query: 317 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDK 463
           PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKD+
Sbjct: 61  PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDR 109


>AE014298-1331|AAF46494.1| 4547|Drosophila melanogaster CG12139-PB
            protein.
          Length = 4547

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +1

Query: 241  SNHIIYFLSMLPDSLIWYNVIRQCRSLLLDPCNSCI 348
            SN+ IY +++    L+    + + R+++LDPCN  +
Sbjct: 2389 SNNSIYAMNLDGSELVMIARVERPRAIVLDPCNGTL 2424


>AE013599-212|AAM70820.1|  305|Drosophila melanogaster CG9430-PA
           protein.
          Length = 305

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 259 FLSMLPDSLIWYNVIRQCRSLLLDPCNSCIKQRDINGAWYLTYCNIRTYHAV 414
           F+ MLP+ +   N ++ CR  +L P    + +  +   +YL YC   T H V
Sbjct: 67  FIHMLPEVVEVVNALQDCR--MLAPTPFGLPEVLLCTGFYLMYCIEETMHFV 116


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,569,535
Number of Sequences: 53049
Number of extensions: 373253
Number of successful extensions: 868
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)