Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12f08
(561 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonin... 32 0.25
U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase ... 32 0.25
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 32 0.32
Z82266-9|CAB05186.1| 276|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z68320-2|CAA92706.1| 502|Caenorhabditis elegans Hypothetical pr... 31 0.75
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 30 1.3
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL032632-4|CAA21584.1| 469|Caenorhabditis elegans Hypothetical ... 29 1.7
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 29 1.7
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 29 1.7
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 29 1.7
Z81086-4|CAB03117.1| 342|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81072-8|CAE17783.1| 143|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68300-1|CAA92617.1| 185|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68215-2|CAA92451.2| 452|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z46266-7|CAH60751.1| 470|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z46266-6|CAA86411.2| 515|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z80220-3|CAB02306.1| 601|Caenorhabditis elegans Hypothetical pr... 28 4.0
U61952-4|AAK84529.1| 267|Caenorhabditis elegans Hypothetical pr... 28 4.0
U58754-3|AAX22293.1| 318|Caenorhabditis elegans Serpentine rece... 28 5.3
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 28 5.3
U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical pr... 27 7.0
U41559-4|AAC24257.1| 413|Caenorhabditis elegans Hypothetical pr... 27 9.2
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein... 27 9.2
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 27 9.2
AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical ... 27 9.2
>U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonine
kinase protein.
Length = 982
Score = 32.3 bits (70), Expect = 0.25
Identities = 25/130 (19%), Positives = 52/130 (40%)
Frame = +1
Query: 130 KKKFSCSLTINMYTLKGIFPEPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTN 309
K + CS + K + +K KK +N +Q+K Q KE + Q
Sbjct: 585 KMRVRCSQNNELDKRKKDIEDGEKKMKKTKNSQNQQQMKLYSAQQLKEYKYNKEAQ---- 640
Query: 310 SATGSTIGQVKSSPSNKSAKISLNIGKPGAANRKKLSDNVRIKKGDMAEFLKRKELRQMK 489
++ +S+ N ++ ++ + A + +R + D +R++L +
Sbjct: 641 KTRLRSLNMPRSTYENAMKEVKADLNRVKDARENDFDEKLRAELEDEIVRYRRQQLSNLH 700
Query: 490 PVDLQNDDEN 519
++ Q DDE+
Sbjct: 701 QLEEQLDDED 710
>U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase
protein 18, isoforma protein.
Length = 982
Score = 32.3 bits (70), Expect = 0.25
Identities = 25/130 (19%), Positives = 52/130 (40%)
Frame = +1
Query: 130 KKKFSCSLTINMYTLKGIFPEPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTN 309
K + CS + K + +K KK +N +Q+K Q KE + Q
Sbjct: 585 KMRVRCSQNNELDKRKKDIEDGEKKMKKTKNSQNQQQMKLYSAQQLKEYKYNKEAQ---- 640
Query: 310 SATGSTIGQVKSSPSNKSAKISLNIGKPGAANRKKLSDNVRIKKGDMAEFLKRKELRQMK 489
++ +S+ N ++ ++ + A + +R + D +R++L +
Sbjct: 641 KTRLRSLNMPRSTYENAMKEVKADLNRVKDARENDFDEKLRAELEDEIVRYRRQQLSNLH 700
Query: 490 PVDLQNDDEN 519
++ Q DDE+
Sbjct: 701 QLEEQLDDED 710
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 31.9 bits (69), Expect = 0.32
Identities = 22/113 (19%), Positives = 49/113 (43%)
Frame = +1
Query: 190 EPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAK 369
E KK++KK K+ + K +++ K++ K+ ++ T T + K K
Sbjct: 67 EEKKEEKKEEEKKADDEKKKTEEKDDKKSKKTEEKDKISVKKTQETKSERKDKKDEKKED 126
Query: 370 ISLNIGKPGAANRKKLSDNVRIKKGDMAEFLKRKELRQMKPVDLQNDDENSSE 528
K + + +K D V+ KK D + K+ ++ K +++ + + +
Sbjct: 127 EKKEESKEKSKDEEKKKDEVKDKKEDEKKDDKKPGEKEEKKEEVKKETKKEEK 179
>Z82266-9|CAB05186.1| 276|Caenorhabditis elegans Hypothetical
protein F23B2.7 protein.
Length = 276
Score = 30.7 bits (66), Expect = 0.75
Identities = 25/80 (31%), Positives = 31/80 (38%)
Frame = +1
Query: 301 MTNSATGSTIGQVKSSPSNKSAKISLNIGKPGAANRKKLSDNVRIKKGDMAEFLKRKELR 480
M SA G+ QV+ P GK G A KK S + +K + KE
Sbjct: 80 MQKSAIGNGTQQVEEKPKTPGN------GKNGKAYSKKKSKKTKSEKSQSSN----KEGA 129
Query: 481 QMKPVDLQNDDENSSESSGH 540
MKP+D DD N H
Sbjct: 130 PMKPMDPIRDDPNDDPPQAH 149
>Z68320-2|CAA92706.1| 502|Caenorhabditis elegans Hypothetical
protein W07A12.7 protein.
Length = 502
Score = 30.7 bits (66), Expect = 0.75
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = -1
Query: 210 FLIFLRLGEYTLQSIHVDCQTTTEFLFKHTLII*IPTNSTLL 85
FLI L LG T+ S ++ TT++ LF+ +LI+ I T +L
Sbjct: 337 FLIGLLLGYITVSSKYIMVSTTSKTLFRSSLIVAIATIYAIL 378
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +1
Query: 262 SPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAKISLN--IGKPGAANRKKLSDNVRI 435
SP +L AT S+ GQ P ++S KI L +G A R LSD +
Sbjct: 1318 SPASRPSNLAISPAQLHATSSS-GQ-SHQPMSRSQKIRLRTKLGSRDPARRHTLSDVDTL 1375
Query: 436 KKGDMAEFLKRKELRQMKPVDLQNDDENSSESS 534
K+G + + + +R+ P D+ D+ + E +
Sbjct: 1376 KEGRLDKLARWFGIRKSSP-DVSRDEVSDDEKN 1407
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical protein
C04D8.1 protein.
Length = 1317
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +1
Query: 262 SPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAKISLN--IGKPGAANRKKLSDNVRI 435
SP +L AT S+ GQ P ++S KI L +G A R LSD +
Sbjct: 1196 SPASRPSNLAISPAQLHATSSS-GQ-SHQPMSRSQKIRLRTKLGSRDPARRHTLSDVDTL 1253
Query: 436 KKGDMAEFLKRKELRQMKPVDLQNDDENSSESS 534
K+G + + + +R+ P D+ D+ + E +
Sbjct: 1254 KEGRLDKLARWFGIRKSSP-DVSRDEVSDDEKN 1285
>AL032632-4|CAA21584.1| 469|Caenorhabditis elegans Hypothetical
protein Y11D7A.8 protein.
Length = 469
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 175 KGIFPEPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIG 333
KG +P K +++ +KQ+ Y+ S K TS S D+ S TIG
Sbjct: 236 KGQEQDPVKGLMLEVVRDLLKQIAYLHSISLKHTSWSTLVADLPPSYYAHTIG 288
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/115 (20%), Positives = 50/115 (43%)
Frame = +1
Query: 187 PEPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSA 366
P PKK K + ++ +++SP+++SK R + + S + + + S
Sbjct: 49 PPPKKRPAKKRKASSSEEDDDDEEESPRKSSKKSRKRAKSESESDESDEEEDRKKSKSKK 108
Query: 367 KISLNIGKPGAANRKKLSDNVRIKKGDMAEFLKRKELRQMKPVDLQNDDENSSES 531
K+ K + +K+ + + + D E ++K ++ K Q E+S ES
Sbjct: 109 KVDQK--KKEKSKKKRTTSSSEDEDSD--EEREQKSKKKSKKTKKQTSSESSEES 159
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 29.5 bits (63), Expect = 1.7
Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 1/116 (0%)
Frame = +1
Query: 193 PKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAKI 372
PK D K EN+K K +K+ PK+ + + ++ + S +K +
Sbjct: 39 PKADSKMKPPVENVKSKKSEKKEEPKKEEEPKKEEEKKEKSKKS------EKKDDKKEEA 92
Query: 373 SLNIGKPGAANRKKLSDNVRIKKGDMAEFLKRKELRQMKPV-DLQNDDENSSESSG 537
K +K D KK D E K ++ K D + +DE + SG
Sbjct: 93 KKEDDKKDEKKDEKKEDKKDDKKDDKKEEKKEEKKEDEKEKGDDKKEDEKDDKKSG 148
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/115 (20%), Positives = 50/115 (43%)
Frame = +1
Query: 187 PEPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSA 366
P PKK K + ++ +++SP+++SK R + + S + + + S
Sbjct: 49 PPPKKRPAKKRKASSSEEDDDDEEESPRKSSKKSRKRAKSESESDESDEEEDRKKSKSKK 108
Query: 367 KISLNIGKPGAANRKKLSDNVRIKKGDMAEFLKRKELRQMKPVDLQNDDENSSES 531
K+ K + +K+ + + + D E ++K ++ K Q E+S ES
Sbjct: 109 KVDQK--KKEKSKKKRTTSSSEDEDSD--EEREQKSKKKSKKTKKQTSSESSEES 159
>Z81086-4|CAB03117.1| 342|Caenorhabditis elegans Hypothetical
protein F53B6.4 protein.
Length = 342
Score = 28.7 bits (61), Expect = 3.0
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = +1
Query: 268 KETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAKISLNIGKPGAANRKKLSDNVRIKKGD 447
K +SKS + S GS+ KSS S+KS K+ + + V K+ +
Sbjct: 110 KRSSKSSKKGTSGKSGKGSSKRGGKSSKSSKSKKVKTATTSGSQVSTVSAATGVSDKQSN 169
Query: 448 MAEFLKR--KELRQMKPVDLQNDDENSSESSGHLRDVA 555
++ ++ K + K L +D + E SG VA
Sbjct: 170 SSKSSRKSSKSSKSRKNRRLDSDAQKKMEKSGKSGKVA 207
>Z81072-8|CAE17783.1| 143|Caenorhabditis elegans Hypothetical
protein F30A10.12 protein.
Length = 143
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 190 EPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQ 297
+ K+++KK+ KE K+ K K+S K++SKS + +
Sbjct: 84 DEKEEEKKDEKKETSKKSKKASKKSVKKSSKSKKNE 119
>Z68300-1|CAA92617.1| 185|Caenorhabditis elegans Hypothetical
protein T22B3.3 protein.
Length = 185
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 190 EPKKDQKKNFIKENMKQLKYIQKQSPKETSK 282
E KK++KKN KE K+ K +K+ KE K
Sbjct: 152 EEKKEEKKNEEKEEKKEDKKEEKKEEKEEDK 182
>Z68215-2|CAA92451.2| 452|Caenorhabditis elegans Hypothetical
protein C53B4.2 protein.
Length = 452
Score = 28.7 bits (61), Expect = 3.0
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +1
Query: 190 EPKKDQKKNFIKENMKQLKYIQK-QSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSA 366
E KKD+KK+ KE K+ K +K + K+ K T+ N GS + K +
Sbjct: 90 ENKKDEKKDEKKEEKKEEKKEEKGEGEKKDEKKDSTRGKENMGPGSD-SDLDGDLGMKKS 148
Query: 367 KISLNIGKPGAANRKKLSDNVRIKKGDMAEFLKRKELRQMK 489
I L N+K V IK D+ + K L+++K
Sbjct: 149 NIVL-------PNQKGKPQKVSIKTRDVDQKEMEKLLKKLK 182
>Z46266-7|CAH60751.1| 470|Caenorhabditis elegans Hypothetical
protein C07B5.4b protein.
Length = 470
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 208 KKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQ-VKSSPSNKSAKISLNI 384
K+ +K+ K + + Q QSPK + KS+ + +N IG+ V + N + +
Sbjct: 371 KRPQVKQRAKVIDFFQAQSPKPSRKSIIHEPSSNYVIQLNIGEDVMENEYNSYSPLYRMS 430
Query: 385 GKPGAANRKKLSDNVR 432
+P ++ R D +
Sbjct: 431 PRPPSSYRHHSDDQYK 446
>Z46266-6|CAA86411.2| 515|Caenorhabditis elegans Hypothetical
protein C07B5.4a protein.
Length = 515
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 208 KKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQ-VKSSPSNKSAKISLNI 384
K+ +K+ K + + Q QSPK + KS+ + +N IG+ V + N + +
Sbjct: 416 KRPQVKQRAKVIDFFQAQSPKPSRKSIIHEPSSNYVIQLNIGEDVMENEYNSYSPLYRMS 475
Query: 385 GKPGAANRKKLSDNVR 432
+P ++ R D +
Sbjct: 476 PRPPSSYRHHSDDQYK 491
>Z80220-3|CAB02306.1| 601|Caenorhabditis elegans Hypothetical
protein T08G11.3 protein.
Length = 601
Score = 28.3 bits (60), Expect = 4.0
Identities = 27/95 (28%), Positives = 40/95 (42%)
Frame = +1
Query: 247 YIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAKISLNIGKPGAANRKKLSDN 426
Y QKQ+ E S LR T +G GQ + ++ + G AN + S
Sbjct: 269 YDQKQA--ERSGILRGPTNTEMFSGPFNGQTTNKSDYDQKQVGRSEILKGPANTEMFSGP 326
Query: 427 VRIKKGDMAEFLKRKELRQMKPVDLQNDDENSSES 531
+ A+F K++ RQ + QNDD S+ S
Sbjct: 327 FDGITTNKADFDKKQADRQQRYPRAQNDDRLSAGS 361
>U61952-4|AAK84529.1| 267|Caenorhabditis elegans Hypothetical
protein F42A9.7 protein.
Length = 267
Score = 28.3 bits (60), Expect = 4.0
Identities = 22/104 (21%), Positives = 45/104 (43%)
Frame = +1
Query: 223 KENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAKISLNIGKPGAA 402
+ N + K + +SKS R+ +NS + KSS S +S K + + P
Sbjct: 49 RRNGRSRKSSRSGKSSRSSKSGRSSKSSNSTKTTGSKSSKSSRSQRSNKSNKMVTNPKGF 108
Query: 403 NRKKLSDNVRIKKGDMAEFLKRKELRQMKPVDLQNDDENSSESS 534
+ +K+ + + A+ +K ++L + Q + N ++ S
Sbjct: 109 SDRKIRAAILADQKAAADAVKSQKLSSNNSSEKQLNAHNDNKIS 152
>U58754-3|AAX22293.1| 318|Caenorhabditis elegans Serpentine
receptor, class sx protein16 protein.
Length = 318
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 503 CKSTGFICLSSLRLRNSAMSPFFIRTLSESFFLFAAPGLPM 381
C TG IC+ SL L + + PF R SF+L LP+
Sbjct: 98 CLQTGTICILSLDLFLAIVIPFKYRHFRMSFYLPMLLFLPL 138
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +1
Query: 235 KQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAKISLNIGKPGAANRKK 414
+QL +++ + ++T+ +T + G G V P +A +S+N G PG+A
Sbjct: 133 QQLHQPKQEITTNGEEIMKTEALTPTGGGGG-GSVPPPPPAATAAVSMNGGGPGSAPGSA 191
Query: 415 LSDNVRIKKG 444
S N + G
Sbjct: 192 HSVNNNVNPG 201
>U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical
protein F13H8.8 protein.
Length = 520
Score = 27.5 bits (58), Expect = 7.0
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Frame = +1
Query: 187 PEPKKDQKKNFIKENMKQL----KYIQKQSPKETSKSLRTQDMTNSATGSTIGQV--KSS 348
P KK KK ++++M+ L K + S ++ + + D+ + GS + K +
Sbjct: 128 PLMKKSDKKRKMRDSMESLDEGEKLKRNSSRRKKNGRRKKSDVRKAQQGSDERKKHKKQN 187
Query: 349 PSNKSAKISLNIGKPGAANRKKLSDNVRIKKGDMAEFLKRKELRQMKP 492
N S + ++ AAN K +N KKG +K E + P
Sbjct: 188 SKNLSKEQIRSLVASPAANVDKTLENFASKKGKRLSVVKSAESAKKTP 235
>U41559-4|AAC24257.1| 413|Caenorhabditis elegans Hypothetical
protein C26B2.1 protein.
Length = 413
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 442 GDMAEFLKRKELRQMKPVDLQNDDENSSESSGHLRD 549
G++ ++KR EL + P DL+ + ++ HL+D
Sbjct: 127 GEVTAYMKRLELIENAPKDLKKGKSGKAWTAFHLKD 162
>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
protein.
Length = 1376
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +1
Query: 235 KQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAKISLNIGK 390
+QL IQK + SKS + SA ST G SS N++A++ N+ K
Sbjct: 27 QQLAKIQKATASSPSKSTNGTSASTSAVPSTSG--TSSSQNEAAQLQ-NLAK 75
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = +1
Query: 301 MTNSATGSTIGQVKSSPSNKSAKISLNIGKPGAANRKKLSDNVRIKKGDMAEFLKRKELR 480
+T+S + T ++ + P+ + L K K L +R D+ + RKE +
Sbjct: 814 LTSSQSSETWYKLDTEPAIRQLMTQL---KTNGKREKLLKKYLRNNMDDIISSILRKEKK 870
Query: 481 QMKPVDLQNDDENSSE 528
Q K D + +DE +SE
Sbjct: 871 QKKD-DGEEEDEEASE 885
>AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical
protein Y59E9AL.6 protein.
Length = 214
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 190 EPKKDQKKNFIKENMKQLKYIQKQSPKETSKSLRTQDMTNSATGSTIGQVKSSPSNKSAK 369
+ KKD+KK+ K+ K K + + K+ K +D + + KS SNKS K
Sbjct: 117 DDKKDEKKSDKKDEKKDDKKEKDEEKKDDKKEDEKKD-DDKKDDKKEAKSKSKKSNKSKK 175
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,519,008
Number of Sequences: 27780
Number of extensions: 260440
Number of successful extensions: 1082
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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