Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12f02
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071552-1|AAL49174.1|  146|Drosophila melanogaster RE61805p pro...   124   1e-28
AE014298-1638|AAF48058.1|  146|Drosophila melanogaster CG11699-P...   124   1e-28
AY113356-1|AAM29361.1|  347|Drosophila melanogaster GM13546p pro...    40   0.002
AE013599-3824|AAF47170.1|  347|Drosophila melanogaster CG3260-PA...    40   0.002

>AY071552-1|AAL49174.1|  146|Drosophila melanogaster RE61805p
           protein.
          Length = 146

 Score =  124 bits (299), Expect = 1e-28
 Identities = 61/112 (54%), Positives = 73/112 (65%), Gaps = 1/112 (0%)
 Frame = +3

Query: 159 ITGISALIGFSATLSTAKKSDPKYFSK-GLHGGAELGDAGAILALRALGWGTLYAVAGTG 335
           + G+SAL GFS TL+TAKK+D K   + G   G  L D GA LALRALGWGTLYAV GTG
Sbjct: 30  VGGVSALFGFSRTLATAKKTDSKVLQQAGTRQGMILMDEGATLALRALGWGTLYAVMGTG 89

Query: 336 FLCYGIWKLSGAKDLKDFRVKMGXXXXXXXXXXXXQSRTEFSGLNDFLTYVS 491
             CYG WKLSGAKD ++FR+KMG             SRT+F  L D + Y++
Sbjct: 90  AFCYGFWKLSGAKDFQEFRLKMGNALPRITKDEPPASRTDFESLTDLMKYLA 141


>AE014298-1638|AAF48058.1|  146|Drosophila melanogaster CG11699-PA
           protein.
          Length = 146

 Score =  124 bits (299), Expect = 1e-28
 Identities = 61/112 (54%), Positives = 73/112 (65%), Gaps = 1/112 (0%)
 Frame = +3

Query: 159 ITGISALIGFSATLSTAKKSDPKYFSK-GLHGGAELGDAGAILALRALGWGTLYAVAGTG 335
           + G+SAL GFS TL+TAKK+D K   + G   G  L D GA LALRALGWGTLYAV GTG
Sbjct: 30  VGGVSALFGFSRTLATAKKTDSKVLQQAGTRQGMILMDEGATLALRALGWGTLYAVMGTG 89

Query: 336 FLCYGIWKLSGAKDLKDFRVKMGXXXXXXXXXXXXQSRTEFSGLNDFLTYVS 491
             CYG WKLSGAKD ++FR+KMG             SRT+F  L D + Y++
Sbjct: 90  AFCYGFWKLSGAKDFQEFRLKMGNALPRITKDEPPASRTDFESLTDLMKYLA 141


>AY113356-1|AAM29361.1|  347|Drosophila melanogaster GM13546p
           protein.
          Length = 347

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 17/32 (53%), Positives = 23/32 (71%)
 Frame = -1

Query: 679 SIDWGVLAIYTCKASCNKGSAYMLEYMIKQDL 584
           ++DWGVLA+YTC  SC     Y+ E +IKQD+
Sbjct: 311 NLDWGVLAVYTCAKSC-PIDGYVEELLIKQDI 341


>AE013599-3824|AAF47170.1|  347|Drosophila melanogaster CG3260-PA
           protein.
          Length = 347

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 17/32 (53%), Positives = 23/32 (71%)
 Frame = -1

Query: 679 SIDWGVLAIYTCKASCNKGSAYMLEYMIKQDL 584
           ++DWGVLA+YTC  SC     Y+ E +IKQD+
Sbjct: 311 NLDWGVLAVYTCAKSC-PIDGYVEELLIKQDI 341


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,375,447
Number of Sequences: 53049
Number of extensions: 540656
Number of successful extensions: 1552
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1550
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)