Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12e20
         (587 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75529-2|CAA99783.1|  755|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z50740-1|CAA90607.1| 1089|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z77654-2|CAB01130.1|  308|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z75541-5|CAE17852.1|  291|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U72208-1|AAD00182.1|  308|Caenorhabditis elegans inhibitor of ap...    27   9.9  

>Z75529-2|CAA99783.1|  755|Caenorhabditis elegans Hypothetical
           protein C44H9.2 protein.
          Length = 755

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 578 LKWNRRGLEANWNL-QESSRLGERVADLVKHYYV*W 474
           +K+ R   E NWNL  +SSR    +  L+KHY+V W
Sbjct: 558 IKFLRYVSEPNWNLLPDSSRTVIDMPVLMKHYFVGW 593


>Z50740-1|CAA90607.1| 1089|Caenorhabditis elegans Hypothetical
           protein F31B12.2 protein.
          Length = 1089

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 303 IEEVLTFCFMYLTRSGASFLASAL 232
           + ++ TFCF +L +SG S   SAL
Sbjct: 51  LSQIATFCFTFLQKSGTSRQFSAL 74


>Z77654-2|CAB01130.1|  308|Caenorhabditis elegans Hypothetical
           protein C50B8.2 protein.
          Length = 308

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 310 TINRRSINVLLYVFDTERGLLSCKCTEKGLLSAGW 206
           T + R      ++FD +R +   KCT K L  AGW
Sbjct: 166 TFDHRLATFQNFIFDKKRNV---KCTSKKLAKAGW 197


>Z75541-5|CAE17852.1|  291|Caenorhabditis elegans Hypothetical
           protein F52B5.7 protein.
          Length = 291

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -1

Query: 176 PVKNILYINVSSPAPRTTPAAIGTQLFPSLSLIITSEVILLNNLFTSCAFFD 21
           PVK+++  + S   P+    A  +Q  PSL  ++ S V   NN F   +F D
Sbjct: 90  PVKDLVPSSFSHIIPKIEEPASDSQT-PSLDSMLESNVNQWNNSFIGSSFLD 140


>U72208-1|AAD00182.1|  308|Caenorhabditis elegans inhibitor of
           apoptosis homolog protein.
          Length = 308

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 310 TINRRSINVLLYVFDTERGLLSCKCTEKGLLSAGW 206
           T + R      ++FD +R +   KCT K L  AGW
Sbjct: 166 TFDHRLATFQNFIFDKKRNV---KCTSKKLAKAGW 197


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,932,801
Number of Sequences: 27780
Number of extensions: 262962
Number of successful extensions: 613
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)