Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12e19
         (508 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060845-1|AAL28393.1|  186|Drosophila melanogaster GM02242p pro...   282   2e-76
AE014298-945|AAN09183.1|  186|Drosophila melanogaster CG3203-PD,...   282   2e-76
AE014298-944|AAF46194.1|  186|Drosophila melanogaster CG3203-PC,...   282   2e-76
AE014298-943|AAN09182.1|  186|Drosophila melanogaster CG3203-PB,...   282   2e-76
AE014298-942|AAF46195.1|  186|Drosophila melanogaster CG3203-PA,...   282   2e-76
AY094778-1|AAM11131.1|  570|Drosophila melanogaster LD09231p pro...    30   1.6  
AE014297-2310|AAF55387.2|  570|Drosophila melanogaster CG5175-PB...    30   1.6  
AE014297-2309|AAN13733.1|  570|Drosophila melanogaster CG5175-PA...    30   1.6  
DQ812095-1|ABH10625.1|   96|Drosophila melanogaster SnoA protein.      28   8.3  

>AY060845-1|AAL28393.1|  186|Drosophila melanogaster GM02242p
           protein.
          Length = 186

 Score =  282 bits (691), Expect = 2e-76
 Identities = 129/154 (83%), Positives = 141/154 (91%)
 Frame = +3

Query: 45  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 224
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 225 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 404
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 405 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERE 506
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKE 154


>AE014298-945|AAN09183.1|  186|Drosophila melanogaster CG3203-PD,
           isoform D protein.
          Length = 186

 Score =  282 bits (691), Expect = 2e-76
 Identities = 129/154 (83%), Positives = 141/154 (91%)
 Frame = +3

Query: 45  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 224
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 225 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 404
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 405 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERE 506
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKE 154


>AE014298-944|AAF46194.1|  186|Drosophila melanogaster CG3203-PC,
           isoform C protein.
          Length = 186

 Score =  282 bits (691), Expect = 2e-76
 Identities = 129/154 (83%), Positives = 141/154 (91%)
 Frame = +3

Query: 45  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 224
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 225 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 404
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 405 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERE 506
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKE 154


>AE014298-943|AAN09182.1|  186|Drosophila melanogaster CG3203-PB,
           isoform B protein.
          Length = 186

 Score =  282 bits (691), Expect = 2e-76
 Identities = 129/154 (83%), Positives = 141/154 (91%)
 Frame = +3

Query: 45  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 224
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 225 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 404
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 405 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERE 506
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKE 154


>AE014298-942|AAF46195.1|  186|Drosophila melanogaster CG3203-PA,
           isoform A protein.
          Length = 186

 Score =  282 bits (691), Expect = 2e-76
 Identities = 129/154 (83%), Positives = 141/154 (91%)
 Frame = +3

Query: 45  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 224
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 225 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 404
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 405 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERE 506
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKE 154


>AY094778-1|AAM11131.1|  570|Drosophila melanogaster LD09231p
           protein.
          Length = 570

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +2

Query: 305 RRIPLAVIEER*IKR*QQNFGR*QASYRPHSGKSRALPTQTYIPCSRSHQP 457
           RR+PL++     + R QQ+ G    S  P +G  +   T++++P  +S+QP
Sbjct: 23  RRLPLSLSGGSTVTRLQQSSGSNGRSNSPQNGNKKI--TESFLPVKKSNQP 71


>AE014297-2310|AAF55387.2|  570|Drosophila melanogaster CG5175-PB,
           isoform B protein.
          Length = 570

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +2

Query: 305 RRIPLAVIEER*IKR*QQNFGR*QASYRPHSGKSRALPTQTYIPCSRSHQP 457
           RR+PL++     + R QQ+ G    S  P +G  +   T++++P  +S+QP
Sbjct: 23  RRLPLSLSGGSTVTRLQQSSGSNGRSNSPQNGNKKI--TESFLPVKKSNQP 71


>AE014297-2309|AAN13733.1|  570|Drosophila melanogaster CG5175-PA,
           isoform A protein.
          Length = 570

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +2

Query: 305 RRIPLAVIEER*IKR*QQNFGR*QASYRPHSGKSRALPTQTYIPCSRSHQP 457
           RR+PL++     + R QQ+ G    S  P +G  +   T++++P  +S+QP
Sbjct: 23  RRLPLSLSGGSTVTRLQQSSGSNGRSNSPQNGNKKI--TESFLPVKKSNQP 71


>DQ812095-1|ABH10625.1|   96|Drosophila melanogaster SnoA protein.
          Length = 96

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 85  HAKRVVQTSVFTLRTHMRPQWQSERCRS 168
           H KR V+T+++ +  H+  +W S R  S
Sbjct: 28  HKKRKVRTNIYAIYIHIHYKWWSNRSHS 55


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,850,996
Number of Sequences: 53049
Number of extensions: 492061
Number of successful extensions: 1496
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1496
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)